Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is cbrA [H]

Identifier: 170755326

GI number: 170755326

Start: 2282832

End: 2283917

Strand: Reverse

Name: cbrA [H]

Synonym: CLD_2496

Alternate gene names: 170755326

Gene position: 2283917-2282832 (Counterclockwise)

Preceding gene: 170756438

Following gene: 170756576

Centisome position: 57.7

GC content: 34.16

Gene sequence:

>1086_bases
ATGAGTAGTTCATATGATATTGCAATTATTGGATTAGGACCCTCTGGTTCTGTACTTGCACAACTGCTTTCTAAAAAACA
TAAAGTTATTGCTATTGATAAAAAAAACTCTATGGAGAAAGGATTTAAGAAACCCTGTGGTGGATTGCTTTCTTCTGATG
CACAGAAAGCATTAGCAAAGTTAGATATTACACTTCCAAAGGATGTTATAGTGGACCCTCAGATTTTTGCTGTTAAAACT
ATAGATCTTAAAAATACTCTCATTCGCTATTATCAGCGGTGTTATATTAACATTGATCGTCACAAGTTTGATTTATGGTT
GAAATCACTTATTCCAAATCACGTTGAGGTTTATAAAAATTCTTATTGTTCTTCCATTGAAAAAATACCAGAGGGTTATA
GGGTAATTTTTTATGAAAATGGCGTAAAACATGTTATTACCACCAAATATCTGGTGGGGGCAGACGGTGCAAATTCCATG
GTGCGTCACTTCCTTTATCCCAAAAAGAAAATAAGGACTTATATGTCAATTCAGCAATGGTTTTCTGAAACACATGATAA
TCCTTTTTATTCCTGTATTTTTGATTTGGAAAACACAGATTGCTGTTCTTGGTCAATTTCAAAGGATAATAAGTTTATTT
TTGGCGGTGCATTTCCCATTCATAATTCTCGAGAACGATTCGAAAATCAGAAAAAAAAGCTAGAGAAAATTGGATTTAGA
TTTGGGGAGCCTATAAAGACTGAGGCTTGTATGGTACTGCGGCCCTCAGCATTTCATGATTTTTGTTGTGGAAAGGAAAA
CGCTTTTTTAGTTGGAGAGGCTGCTGGATTTATCAGTCCAAGTTCACTGGAGGGAATCAGTTCAGCCATTAGCAGTGCCC
GGGTTTTGAGTGAAGTGTTAAATACATATAGTAAAAGCCCTAACAAAAAATATTGGTTAAAAGCCTTTAATATTCGTTTG
AAGGTCTTTTTGAAACTACTAAAATGCCCTTTTATGTATAATCCATTTTTGCGTAAGCTTGTGTTAAAAAGCGGATTCAA
AAGTATTGATATTGCTTCAACAAAGGAAGAAGTATTCAATAATTAA

Upstream 100 bases:

>100_bases
CTTGATGCTTTGTGCAGAATACTACAATGCCAGCCAGGGGATATTTTAGAGTATAGGGAAGATAAAGATTTAGAAAATGA
GAATAAGGATGAAAAAAGCA

Downstream 100 bases:

>100_bases
TATTACTGACATTTCAAATGAAATTACTAAAATAGGTTATGAAGTTACTAGTATACTCCACCTTCATCATTAAACCTTCG
GCTAATTAAATTAGTCGAGG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKT
IDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSM
VRHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR
FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRL
KVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN

Sequences:

>Translated_361_residues
MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKT
IDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSM
VRHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR
FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRL
KVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN
>Mature_360_residues
SSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKTI
DLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMV
RHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFRF
GEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRLK
VFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbrA family [H]

Homologues:

Organism=Escherichia coli, GI87082319, Length=346, Percent_Identity=54.3352601156069, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 41125; Mature: 40994

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAK
CCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
LDITLPKDVIVDPQIFAVKTIDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKN
HCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHH
SYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMVRHFLYPKKKIRTYMSIQQW
HHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
FSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR
HHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVL
CCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NTYSKSPNKKYWLKAFNIRLKVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFN
HHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHC
N
C
>Mature Secondary Structure 
SSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAK
CCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH
LDITLPKDVIVDPQIFAVKTIDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKN
HCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHH
SYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMVRHFLYPKKKIRTYMSIQQW
HHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
FSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR
HHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVL
CCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
NTYSKSPNKKYWLKAFNIRLKVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFN
HHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA