| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is cbrA [H]
Identifier: 170755326
GI number: 170755326
Start: 2282832
End: 2283917
Strand: Reverse
Name: cbrA [H]
Synonym: CLD_2496
Alternate gene names: 170755326
Gene position: 2283917-2282832 (Counterclockwise)
Preceding gene: 170756438
Following gene: 170756576
Centisome position: 57.7
GC content: 34.16
Gene sequence:
>1086_bases ATGAGTAGTTCATATGATATTGCAATTATTGGATTAGGACCCTCTGGTTCTGTACTTGCACAACTGCTTTCTAAAAAACA TAAAGTTATTGCTATTGATAAAAAAAACTCTATGGAGAAAGGATTTAAGAAACCCTGTGGTGGATTGCTTTCTTCTGATG CACAGAAAGCATTAGCAAAGTTAGATATTACACTTCCAAAGGATGTTATAGTGGACCCTCAGATTTTTGCTGTTAAAACT ATAGATCTTAAAAATACTCTCATTCGCTATTATCAGCGGTGTTATATTAACATTGATCGTCACAAGTTTGATTTATGGTT GAAATCACTTATTCCAAATCACGTTGAGGTTTATAAAAATTCTTATTGTTCTTCCATTGAAAAAATACCAGAGGGTTATA GGGTAATTTTTTATGAAAATGGCGTAAAACATGTTATTACCACCAAATATCTGGTGGGGGCAGACGGTGCAAATTCCATG GTGCGTCACTTCCTTTATCCCAAAAAGAAAATAAGGACTTATATGTCAATTCAGCAATGGTTTTCTGAAACACATGATAA TCCTTTTTATTCCTGTATTTTTGATTTGGAAAACACAGATTGCTGTTCTTGGTCAATTTCAAAGGATAATAAGTTTATTT TTGGCGGTGCATTTCCCATTCATAATTCTCGAGAACGATTCGAAAATCAGAAAAAAAAGCTAGAGAAAATTGGATTTAGA TTTGGGGAGCCTATAAAGACTGAGGCTTGTATGGTACTGCGGCCCTCAGCATTTCATGATTTTTGTTGTGGAAAGGAAAA CGCTTTTTTAGTTGGAGAGGCTGCTGGATTTATCAGTCCAAGTTCACTGGAGGGAATCAGTTCAGCCATTAGCAGTGCCC GGGTTTTGAGTGAAGTGTTAAATACATATAGTAAAAGCCCTAACAAAAAATATTGGTTAAAAGCCTTTAATATTCGTTTG AAGGTCTTTTTGAAACTACTAAAATGCCCTTTTATGTATAATCCATTTTTGCGTAAGCTTGTGTTAAAAAGCGGATTCAA AAGTATTGATATTGCTTCAACAAAGGAAGAAGTATTCAATAATTAA
Upstream 100 bases:
>100_bases CTTGATGCTTTGTGCAGAATACTACAATGCCAGCCAGGGGATATTTTAGAGTATAGGGAAGATAAAGATTTAGAAAATGA GAATAAGGATGAAAAAAGCA
Downstream 100 bases:
>100_bases TATTACTGACATTTCAAATGAAATTACTAAAATAGGTTATGAAGTTACTAGTATACTCCACCTTCATCATTAAACCTTCG GCTAATTAAATTAGTCGAGG
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKT IDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSM VRHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRL KVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN
Sequences:
>Translated_361_residues MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKT IDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSM VRHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRL KVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN >Mature_360_residues SSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAKLDITLPKDVIVDPQIFAVKTI DLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKNSYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMV RHFLYPKKKIRTYMSIQQWFSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFRF GEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVLNTYSKSPNKKYWLKAFNIRLK VFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFNN
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbrA family [H]
Homologues:
Organism=Escherichia coli, GI87082319, Length=346, Percent_Identity=54.3352601156069, Blast_Score=388, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 41125; Mature: 40994
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAK CCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH LDITLPKDVIVDPQIFAVKTIDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKN HCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHH SYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMVRHFLYPKKKIRTYMSIQQW HHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH FSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR HHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVL CCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH NTYSKSPNKKYWLKAFNIRLKVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFN HHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHC N C >Mature Secondary Structure SSSYDIAIIGLGPSGSVLAQLLSKKHKVIAIDKKNSMEKGFKKPCGGLLSSDAQKALAK CCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH LDITLPKDVIVDPQIFAVKTIDLKNTLIRYYQRCYINIDRHKFDLWLKSLIPNHVEVYKN HCCCCCCCEEECCCEEEEEEECHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHH SYCSSIEKIPEGYRVIFYENGVKHVITTKYLVGADGANSMVRHFLYPKKKIRTYMSIQQW HHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH FSETHDNPFYSCIFDLENTDCCSWSISKDNKFIFGGAFPIHNSRERFENQKKKLEKIGFR HHHHCCCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC FGEPIKTEACMVLRPSAFHDFCCGKENAFLVGEAAGFISPSSLEGISSAISSARVLSEVL CCCCCCCCCEEEECCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH NTYSKSPNKKYWLKAFNIRLKVFLKLLKCPFMYNPFLRKLVLKSGFKSIDIASTKEEVFN HHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA