| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yozG [H]
Identifier: 170756438
GI number: 170756438
Start: 2283910
End: 2284155
Strand: Reverse
Name: yozG [H]
Synonym: CLD_2495
Alternate gene names: 170756438
Gene position: 2284155-2283910 (Counterclockwise)
Preceding gene: 170757244
Following gene: 170755326
Centisome position: 57.71
GC content: 33.33
Gene sequence:
>246_bases ATGATTGTAGTTAATTTGGATGTTATGATGGCAAAACGCAAAATATCTTTAACAGAGTTATCGGAACAATTAGGAATGAC CATGGCAAATGTATCAAACTTTAAAAATCATAGGGCAAAAGCTTTTCGATTTACTACCCTTGATGCTTTGTGCAGAATAC TACAATGCCAGCCAGGGGATATTTTAGAGTATAGGGAAGATAAAGATTTAGAAAATGAGAATAAGGATGAAAAAAGCAAT GAGTAG
Upstream 100 bases:
>100_bases ACAATGGGTTTTTTATTCTTGATAATGTCTAACATATTTAAAGTAGCTGCTGAAATCAAAGAAGAGAATGACTTAACATT TTAAAGGGGGGAAATCAAAT
Downstream 100 bases:
>100_bases TTCATATGATATTGCAATTATTGGATTAGGACCCTCTGGTTCTGTACTTGCACAACTGCTTTCTAAAAAACATAAAGTTA TTGCTATTGATAAAAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MIVVNLDVMMAKRKISLTELSEQLGMTMANVSNFKNHRAKAFRFTTLDALCRILQCQPGDILEYREDKDLENENKDEKSN E
Sequences:
>Translated_81_residues MIVVNLDVMMAKRKISLTELSEQLGMTMANVSNFKNHRAKAFRFTTLDALCRILQCQPGDILEYREDKDLENENKDEKSN E >Mature_81_residues MIVVNLDVMMAKRKISLTELSEQLGMTMANVSNFKNHRAKAFRFTTLDALCRILQCQPGDILEYREDKDLENENKDEKSN E
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 9394; Mature: 9394
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVNLDVMMAKRKISLTELSEQLGMTMANVSNFKNHRAKAFRFTTLDALCRILQCQPGD CEEEECHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC ILEYREDKDLENENKDEKSNE CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVVNLDVMMAKRKISLTELSEQLGMTMANVSNFKNHRAKAFRFTTLDALCRILQCQPGD CEEEECHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC ILEYREDKDLENENKDEKSNE CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]