Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is trxA [C]

Identifier: 170755306

GI number: 170755306

Start: 1943069

End: 1943500

Strand: Reverse

Name: trxA [C]

Synonym: CLD_2820

Alternate gene names: 170755306

Gene position: 1943500-1943069 (Counterclockwise)

Preceding gene: 170754289

Following gene: 170756804

Centisome position: 49.1

GC content: 28.7

Gene sequence:

>432_bases
ATGAAAAAAGGCGTTAAATTATTTATAATATTTATCTTAATTGTTATTATAGCAATTATGGCTTGGTTTAAAGCTGTTAA
ACCTAAAGAAAAATATTCAAACATAGGAGGGAATTCAGTAAAAGAGGAAAATATTGATTATGAAGCTAATGTAGGTAAAA
TGCCTGTATTATTAGAATTAAGTTCGCCAACCTGTGGACCTTGCAGAAAAATGACACCTATTATAAAGGAAGTAAAAGAG
GAATACAAAGATACAGTGGATACTCACATAATAGATTTGACTAAAAATCCTGAATTTGGAGAAAAATATAAAGTTTCCGT
GGTTCCAACACAAGTATTTTTGGACAAAGAGGGAAAGGTATTTTTTAGACATGAGGGTATGCTTACAAAAGAAGAAATTG
TAGATATATTAAATAAAATGGGTGTAAAATAA

Upstream 100 bases:

>100_bases
TAATTGTATGTTAAAATTGAAATAGCCTTCAGAGAAGTTATATTCTTTGAAGGTTATTTTGAAATTTTTACATTATATTA
TAAAGCATAAAGGAGGAATT

Downstream 100 bases:

>100_bases
TATGAATGAGATTATAACAAAAGCTGTAAGCCTAATGGGAAATAATGTTCTTTTAGCTTTGTTAATATCCTTCTTAGGAG
GTATAATTTCTTCCTTTAGT

Product: thioredoxin family protein

Products: NA

Alternate protein names: Thioredoxin; Thioredoxin Domain-Containing Protein; Thioredoxin Family Protein; Thioredoxin-Related Protein; Thioredoxin Domain

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKGVKLFIIFILIVIIAIMAWFKAVKPKEKYSNIGGNSVKEENIDYEANVGKMPVLLELSSPTCGPCRKMTPIIKEVKE
EYKDTVDTHIIDLTKNPEFGEKYKVSVVPTQVFLDKEGKVFFRHEGMLTKEEIVDILNKMGVK

Sequences:

>Translated_143_residues
MKKGVKLFIIFILIVIIAIMAWFKAVKPKEKYSNIGGNSVKEENIDYEANVGKMPVLLELSSPTCGPCRKMTPIIKEVKE
EYKDTVDTHIIDLTKNPEFGEKYKVSVVPTQVFLDKEGKVFFRHEGMLTKEEIVDILNKMGVK
>Mature_143_residues
MKKGVKLFIIFILIVIIAIMAWFKAVKPKEKYSNIGGNSVKEENIDYEANVGKMPVLLELSSPTCGPCRKMTPIIKEVKE
EYKDTVDTHIIDLTKNPEFGEKYKVSVVPTQVFLDKEGKVFFRHEGMLTKEEIVDILNKMGVK

Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16294; Mature: 16294

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGVKLFIIFILIVIIAIMAWFKAVKPKEKYSNIGGNSVKEENIDYEANVGKMPVLLEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE
SSPTCGPCRKMTPIIKEVKEEYKDTVDTHIIDLTKNPEFGEKYKVSVVPTQVFLDKEGKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCEEEECCCCCE
FFRHEGMLTKEEIVDILNKMGVK
EEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKGVKLFIIFILIVIIAIMAWFKAVKPKEKYSNIGGNSVKEENIDYEANVGKMPVLLEL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE
SSPTCGPCRKMTPIIKEVKEEYKDTVDTHIIDLTKNPEFGEKYKVSVVPTQVFLDKEGKV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCEEEECCCCCE
FFRHEGMLTKEEIVDILNKMGVK
EEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA