| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pyrE
Identifier: 170755064
GI number: 170755064
Start: 3514359
End: 3514934
Strand: Reverse
Name: pyrE
Synonym: CLD_1296
Alternate gene names: 170755064
Gene position: 3514934-3514359 (Counterclockwise)
Preceding gene: 170755388
Following gene: 170757055
Centisome position: 88.8
GC content: 29.86
Gene sequence:
>576_bases ATGAGTAATATAAATGTTATAGATATATTAAAAGAATCAGATGCGTTATTAGAAGGACATTTCTTATTATCATCAGGAAG ACATAGTAATAGATATTGTCAATGTGCAAAACTACTCCAATGCCCACAAAAAGCAGAAAAAGTTATTAGTGTAATAGCAG AAAAGCTTAAAGAAGTAGATTTTAATATAATAGTAGGACCAGCTATGGGAGGGGTAATAGTATCCTATGAATTAGCAAGA CAAACTAATAAACCTGGTATATTTGCAGAAAGAAAAGAAGGGGTTATGTGCATAAGAAGGGGATTTGAAATAAAAAAAGG AGATAAAGTTATAATATCAGAAGATGTAGTAACTACAGGAAAATCTTCTTTAGAAGTAGCTAAAGTTATAGAAGAAATGG GTGGAGAAGTAGTAGGTATAGCATGTATAGTTGATAGAAGAGCAGAGGATATAAAAACAAACTATCCAATATATAGTGCT TGTAAATTAGAAATAGAAACTTATGAAAAAGATAACTGTGAGTTATGCAAAAAAAACATACCTTTTGTAAAACCAGGTAG CAGAGAACAAAAATAA
Upstream 100 bases:
>100_bases GGACTTAGAAAATTATATGAAAAAACAAGGTATTAAAAATTTAGAAGAAATAAGGGGAATTATTTAAAATAAATTTTGAA AATATAAGGAGAAGATATAA
Downstream 100 bases:
>100_bases ATTTTAAAATAAGAGTTGTCTCAAAATAGATTTAATTTTGGGACATTTTTTTAGTTTTAACAAATATTAAACAAAAACTT AATTTTACTTTAATAATTAT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSNINVIDILKESDALLEGHFLLSSGRHSNRYCQCAKLLQCPQKAEKVISVIAEKLKEVDFNIIVGPAMGGVIVSYELAR QTNKPGIFAERKEGVMCIRRGFEIKKGDKVIISEDVVTTGKSSLEVAKVIEEMGGEVVGIACIVDRRAEDIKTNYPIYSA CKLEIETYEKDNCELCKKNIPFVKPGSREQK
Sequences:
>Translated_191_residues MSNINVIDILKESDALLEGHFLLSSGRHSNRYCQCAKLLQCPQKAEKVISVIAEKLKEVDFNIIVGPAMGGVIVSYELAR QTNKPGIFAERKEGVMCIRRGFEIKKGDKVIISEDVVTTGKSSLEVAKVIEEMGGEVVGIACIVDRRAEDIKTNYPIYSA CKLEIETYEKDNCELCKKNIPFVKPGSREQK >Mature_190_residues SNINVIDILKESDALLEGHFLLSSGRHSNRYCQCAKLLQCPQKAEKVISVIAEKLKEVDFNIIVGPAMGGVIVSYELARQ TNKPGIFAERKEGVMCIRRGFEIKKGDKVIISEDVVTTGKSSLEVAKVIEEMGGEVVGIACIVDRRAEDIKTNYPIYSAC KLEIETYEKDNCELCKKNIPFVKPGSREQK
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRE_CLOB1 (A7FYI6)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001385559.1 - ProteinModelPortal: A7FYI6 - SMR: A7FYI6 - STRING: A7FYI6 - GeneID: 5394728 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_3272 - eggNOG: COG0461 - HOGENOM: HBG404341 - OMA: FYLQSAK - ProtClustDB: PRK00455 - BioCyc: CBOT441770:CLB_3272-MONOMER - HAMAP: MF_01208 - InterPro: IPR023031 - InterPro: IPR006273 - InterPro: IPR000836 - TIGRFAMs: TIGR01367
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.10
Molecular weight: Translated: 21240; Mature: 21109
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: BINDING 118-118 BINDING 146-146
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNINVIDILKESDALLEGHFLLSSGRHSNRYCQCAKLLQCPQKAEKVISVIAEKLKEVD CCCCCEEEEECCCCCHHCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC FNIIVGPAMGGVIVSYELARQTNKPGIFAERKEGVMCIRRGFEIKKGDKVIISEDVVTTG CEEEECCCCCCEEEEEHHHHCCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCC KSSLEVAKVIEEMGGEVVGIACIVDRRAEDIKTNYPIYSACKLEIETYEKDNCELCKKNI CHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCEEEEEEEEEEECCCCCHHHHHCCC PFVKPGSREQK CCCCCCCCCCC >Mature Secondary Structure SNINVIDILKESDALLEGHFLLSSGRHSNRYCQCAKLLQCPQKAEKVISVIAEKLKEVD CCCCEEEEECCCCCHHCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC FNIIVGPAMGGVIVSYELARQTNKPGIFAERKEGVMCIRRGFEIKKGDKVIISEDVVTTG CEEEECCCCCCEEEEEHHHHCCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCC KSSLEVAKVIEEMGGEVVGIACIVDRRAEDIKTNYPIYSACKLEIETYEKDNCELCKKNI CHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCEEEEEEEEEEECCCCCHHHHHCCC PFVKPGSREQK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA