| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757055
Identifier: 170757055
GI number: 170757055
Start: 3513333
End: 3514145
Strand: Reverse
Name: 170757055
Synonym: CLD_1297
Alternate gene names: NA
Gene position: 3514145-3513333 (Counterclockwise)
Preceding gene: 170755064
Following gene: 170755921
Centisome position: 88.78
GC content: 23.0
Gene sequence:
>813_bases GTGGCAAAACCAAGTATTTTTAGCAAAGATTATGAAAGAAGAATGAAAAGAAGAAAAAGAAGAACTTTTTTTTCAGTTAT AGTTATAATATTAATTTCTTTAGTAATAATATTTACCAATAATGGTATTGGTAAAAAAATAAAAAATAGTTTAAATCAAA TAAAAGAAGAAACTAAGGCTGAAGAAGAACAAAAAAATAAACAACAAGAACAAAAGGAAAATAAAAAAGAAAATGAAAAT AAAAATGCAGCCACAGTAAAAAAAGAAAGTGAAGTTCCTAAAGATAATAATATAGAAGTTCAATTAGAAGACAATATGAA AATAAAGTTGTTATATATAGAAGATAGTAATAAAAATAAGACTATTAAATCTATAGATTTAAATAAAAATAATTTATTAT ATGATATAAATCCTTCAAAAAATTCAATAGTTGTAACTAATCCTAAAACTCAAAATATTTATTTAGTAAATTTAAATGGT GAAAAGCAAGATATAACAAATAAGCAGTATACATCAACATCTGGAACAACTTTTCAAAAGGATGCTATATTAGCATCAAA GCAAGATTATTTATGGGGAGTTTTACCTAAATTCATAGATAATGATAATATAGCTTATGTTTCTCAACTACCATGGTTCA ATAAGACCACTAAATATGTATGGATGTATAATATAAAAAATAAAACTCATTTATACAATCAAAACATATCAGGAGAAGAC ATTAAGTTTGATAAATTAACAGAAAAAGGACTTACAGTAATTTCAGATGGGAGAACTTTATTTTTGAAAGCAGATGGAAA TATATCTCAGTAA
Upstream 100 bases:
>100_bases AATTTTTATTGTTTTGAGTTATAATAGTGTTGAATATATAATAATTGATACATTTTATTTATTTTAGTATAGATAGGCAT TATATATAGGAGGAATTATT
Downstream 100 bases:
>100_bases ATTAAAAAATATTGAATAAATAAAATGAAACTAAAATTAATGGAGATGTAAGAGTTTTAAGAGTGTATTAAGTGTGTACA CTCTTGCTTTATTTGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENEN KNAATVKKESEVPKDNNIEVQLEDNMKIKLLYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNG EKQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED IKFDKLTEKGLTVISDGRTLFLKADGNISQ
Sequences:
>Translated_270_residues MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENEN KNAATVKKESEVPKDNNIEVQLEDNMKIKLLYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNG EKQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED IKFDKLTEKGLTVISDGRTLFLKADGNISQ >Mature_269_residues AKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENENK NAATVKKESEVPKDNNIEVQLEDNMKIKLLYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGE KQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGEDI KFDKLTEKGLTVISDGRTLFLKADGNISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31355; Mature: 31224
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEEQKNKQQEQKENKKENENKNAATVKKESEVPKDNNIEVQLEDNMKIKLLYIEDSNKNK HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCC TIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGEKQDITNKQYTSTSGTTFQK EEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCHHHCCCCEECCCCCCEEEC DAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED CHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEECCCCCCCC IKFDKLTEKGLTVISDGRTLFLKADGNISQ EEHHHHHCCCCEEEECCCEEEEEECCCCCC >Mature Secondary Structure AKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEEQKNKQQEQKENKKENENKNAATVKKESEVPKDNNIEVQLEDNMKIKLLYIEDSNKNK HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCC TIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGEKQDITNKQYTSTSGTTFQK EEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCHHHCCCCEECCCCCCEEEC DAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED CHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEECCCCCCCC IKFDKLTEKGLTVISDGRTLFLKADGNISQ EEHHHHHCCCCEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA