| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yaiE [C]
Identifier: 170755063
GI number: 170755063
Start: 3455539
End: 3455817
Strand: Reverse
Name: yaiE [C]
Synonym: CLD_1350
Alternate gene names: 170755063
Gene position: 3455817-3455539 (Counterclockwise)
Preceding gene: 170755914
Following gene: 170754558
Centisome position: 87.31
GC content: 29.75
Gene sequence:
>279_bases ATGAAAGTAAATGAGTATTTTGGTGGTAAGGTAAAATCTATGAGTTTTGTTAATAAAGAAGGAGAGGCTACCATAGGATT AATGGATATAGGCGAATATGAATTTGCCACATGCAAAAAAGAATTCATGACAATAGTTAGTGGGAAAATGACAGTTAAAT TGCCAGGTGAATCAATTTGGAAAGACTTTAGGAAAAATGACACATTTATAGTAGAGGCCAATGAAAAATTTAATGTAAAA CTTCAAGAACAAACAGCCTATATATGTTTTTATAAATAA
Upstream 100 bases:
>100_bases CTTTTAAAGATAGGATAACGAAAAAATATAAAACAAATTACCAAGTTATAGAAACAATAATCAGAATATTGCCAATATTA CGGAAGAGGGAGCGATAAAG
Downstream 100 bases:
>100_bases TTTTACTAAGGAAAAATAAGAAATAAAAAGGGGAGATAGCAATGGTAAAAGCTATATGGTTTGCATTAATAATCTTAGCA GTGTGGTTTGGAATTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MKVNEYFGGKVKSMSFVNKEGEATIGLMDIGEYEFATCKKEFMTIVSGKMTVKLPGESIWKDFRKNDTFIVEANEKFNVK LQEQTAYICFYK
Sequences:
>Translated_92_residues MKVNEYFGGKVKSMSFVNKEGEATIGLMDIGEYEFATCKKEFMTIVSGKMTVKLPGESIWKDFRKNDTFIVEANEKFNVK LQEQTAYICFYK >Mature_92_residues MKVNEYFGGKVKSMSFVNKEGEATIGLMDIGEYEFATCKKEFMTIVSGKMTVKLPGESIWKDFRKNDTFIVEANEKFNVK LQEQTAYICFYK
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family [H]
Homologues:
Organism=Escherichia coli, GI1786590, Length=92, Percent_Identity=39.1304347826087, Blast_Score=80, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009664 - InterPro: IPR014710 [H]
Pfam domain/function: PF06865 DUF1255 [H]
EC number: NA
Molecular weight: Translated: 10630; Mature: 10630
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNEYFGGKVKSMSFVNKEGEATIGLMDIGEYEFATCKKEFMTIVSGKMTVKLPGESIW CCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH KDFRKNDTFIVEANEKFNVKLQEQTAYICFYK HHHCCCCCEEEECCCEEEEEEECCEEEEEEEC >Mature Secondary Structure MKVNEYFGGKVKSMSFVNKEGEATIGLMDIGEYEFATCKKEFMTIVSGKMTVKLPGESIW CCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH KDFRKNDTFIVEANEKFNVKLQEQTAYICFYK HHHCCCCCEEEECCCEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA