| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754558
Identifier: 170754558
GI number: 170754558
Start: 3454622
End: 3455497
Strand: Reverse
Name: 170754558
Synonym: CLD_1351
Alternate gene names: NA
Gene position: 3455497-3454622 (Counterclockwise)
Preceding gene: 170755063
Following gene: 170756600
Centisome position: 87.3
GC content: 33.22
Gene sequence:
>876_bases ATGGTAAAAGCTATATGGTTTGCATTAATAATCTTAGCAGTGTGGTTTGGAATTATATTGTTTAGAGATTTTGTAAAACA TAAAAACAATTTAGAAAATGTATCTTGGGGGAAGACCGCAATTATAGGCTTTATAGTTAACTTTTTTGACGTTTTGGGAA TTGGTGCATTTGCACCTCAAACAGCTTTACTAAAATTAACAAAACAAACAGAAGATAGAGTATTACCAGGTACTTTAAAT TCTGCTAATACAATTCCTGTTTTAATTGAAGCTATAATATTCATAAAAATTATAGAAGTAGATTCTATTACTTTAATATC TATGCTAGTTGCAGCAACTATAGGAGCTGTTATAGGAGCAGGTATAGTATCAAAGCTTCCGGAAAAAATAATTCAACTTA CAATGGGATGTGCATTATTAGTAACAGCTTACTTTATGCTTGCAGGTCAAATGCATTGGATGCCAGGTGGTGGAGATGCT ATAGGGTTACATGGTACAAAATTAATTATAGCAGTAGTAATAAACTTTATATTAGGAGCTCTAATGACAGCAGGGATAGG CTTATATGCACCATGTATGGCCCTAGTGTTTATGTTAGGAATGTCGCCAAAGGTCGCTTTCCCAATAATGATGGGATCTT GTGCATTTTTAATGCCACCAGCATCAGCTAAATTTGTTAAAGAAGGTGCTTATAATAGAAAAGCTAGTGTATCAATGTGT TTGGCTGGAACAGTTGGAGTTTTAATAGCTGCATTTCTAGTTAAATCCTTACCAATGGATATATTACGTTGGTTAGTTAT AGCAGTAGTAATCTATACTGCAACAATAATGCTAAAATCAGCCTTTAAAAACAAATCTAAACAAGCCATTGCCTAA
Upstream 100 bases:
>100_bases ATGAAAAATTTAATGTAAAACTTCAAGAACAAACAGCCTATATATGTTTTTATAAATAATTTTACTAAGGAAAAATAAGA AATAAAAAGGGGAGATAGCA
Downstream 100 bases:
>100_bases AACTATTTTTACAAATTTATATAAAGGGGGGAGCTTATTCTATAAGTTCTACCCCTAGTTTTTTATAAAAAGAAGAGTTA ATAGTGTTTGATAGTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVKAIWFALIILAVWFGIILFRDFVKHKNNLENVSWGKTAIIGFIVNFFDVLGIGAFAPQTALLKLTKQTEDRVLPGTLN SANTIPVLIEAIIFIKIIEVDSITLISMLVAATIGAVIGAGIVSKLPEKIIQLTMGCALLVTAYFMLAGQMHWMPGGGDA IGLHGTKLIIAVVINFILGALMTAGIGLYAPCMALVFMLGMSPKVAFPIMMGSCAFLMPPASAKFVKEGAYNRKASVSMC LAGTVGVLIAAFLVKSLPMDILRWLVIAVVIYTATIMLKSAFKNKSKQAIA
Sequences:
>Translated_291_residues MVKAIWFALIILAVWFGIILFRDFVKHKNNLENVSWGKTAIIGFIVNFFDVLGIGAFAPQTALLKLTKQTEDRVLPGTLN SANTIPVLIEAIIFIKIIEVDSITLISMLVAATIGAVIGAGIVSKLPEKIIQLTMGCALLVTAYFMLAGQMHWMPGGGDA IGLHGTKLIIAVVINFILGALMTAGIGLYAPCMALVFMLGMSPKVAFPIMMGSCAFLMPPASAKFVKEGAYNRKASVSMC LAGTVGVLIAAFLVKSLPMDILRWLVIAVVIYTATIMLKSAFKNKSKQAIA >Mature_291_residues MVKAIWFALIILAVWFGIILFRDFVKHKNNLENVSWGKTAIIGFIVNFFDVLGIGAFAPQTALLKLTKQTEDRVLPGTLN SANTIPVLIEAIIFIKIIEVDSITLISMLVAATIGAVIGAGIVSKLPEKIIQLTMGCALLVTAYFMLAGQMHWMPGGGDA IGLHGTKLIIAVVINFILGALMTAGIGLYAPCMALVFMLGMSPKVAFPIMMGSCAFLMPPASAKFVKEGAYNRKASVSMC LAGTVGVLIAAFLVKSLPMDILRWLVIAVVIYTATIMLKSAFKNKSKQAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31151; Mature: 31151
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKAIWFALIILAVWFGIILFRDFVKHKNNLENVSWGKTAIIGFIVNFFDVLGIGAFAPQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH TALLKLTKQTEDRVLPGTLNSANTIPVLIEAIIFIKIIEVDSITLISMLVAATIGAVIGA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GIVSKLPEKIIQLTMGCALLVTAYFMLAGQMHWMPGGGDAIGLHGTKLIIAVVINFILGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH LMTAGIGLYAPCMALVFMLGMSPKVAFPIMMGSCAFLMPPASAKFVKEGAYNRKASVSMC HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCHHHHHH LAGTVGVLIAAFLVKSLPMDILRWLVIAVVIYTATIMLKSAFKNKSKQAIA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVKAIWFALIILAVWFGIILFRDFVKHKNNLENVSWGKTAIIGFIVNFFDVLGIGAFAPQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH TALLKLTKQTEDRVLPGTLNSANTIPVLIEAIIFIKIIEVDSITLISMLVAATIGAVIGA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH GIVSKLPEKIIQLTMGCALLVTAYFMLAGQMHWMPGGGDAIGLHGTKLIIAVVINFILGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH LMTAGIGLYAPCMALVFMLGMSPKVAFPIMMGSCAFLMPPASAKFVKEGAYNRKASVSMC HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCHHHHHH LAGTVGVLIAAFLVKSLPMDILRWLVIAVVIYTATIMLKSAFKNKSKQAIA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA