| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755052
Identifier: 170755052
GI number: 170755052
Start: 2884201
End: 2885229
Strand: Reverse
Name: 170755052
Synonym: CLD_1857
Alternate gene names: NA
Gene position: 2885229-2884201 (Counterclockwise)
Preceding gene: 170755835
Following gene: 170757325
Centisome position: 72.89
GC content: 30.61
Gene sequence:
>1029_bases ATGTATAAATTATTGGATTGTTTTGATGATGAATGGGATTTATATTTTAATAAAATGCCTGAGCATATTCGAGATATTTA CTATACAAGGAAATACTATAAAATGTATGAGTTGAGTGGTGATGGAAAAGGAAAGCTTTTTGTTTATTATAACAATAGTG GCGATATGGCATTATATCCTTTCATGTTAAAAGAAATACAAGGATATGACATTGGTAACAAGTATTATGATATTGAAACA GCTTATGGCTATGGAGGTCCTGTTCTGAATTGTGTTGATAAAAGTTTTATAAAAGATTTTGAAGATTCTTTTATAAAGTA CTGTAAGGCAAACAATATTGTGGCTGAGTTTGTAAGATTTCATCCCTTGATCAAGAACCAAAATGTATTTTGCAAGGATA TTGAAGTTTTACATAATAGGATTACGGTACAGCTTGATTTGACAAAAAGCTTGAGTGATATTTGGAATGAAGACATTAAA AGCAAAAACAGAAACATGATAAGAAAAGCAAAAAAAAACGGATTGCATGTGGAAGAAAGTAAGGATTTTGAAATCTTCAA GAATATATACGAAAGTACGATGGATAAGGTGGATGCAGGAAGCTATTATTATTTTGACAATGGTTACTATGAAACCATTA AACATAGCAGTGATTATGTATTGCTAAATGTAGAAAAGAATAAGTTGGTAATAGCTTCAGCAATATTCATGGGTCATGGA GACTATTTTCACTATCATTTGGCTGGAAGTTTGAAAGAGACCTTGAAGTTTGCGCCCAATAACCTTTTGCTATGGGAAGC CATAAAATATGCGCATGAAAAAGGATACAAAAGAATGCATTTTGGGGGAGGACTAACAAATAGCATGGATGATAATCTTT TTAGATTCAAAAGCAGCTTTTCAAAAGAACGTGCTGATTTTTACATAGGAAAAAGAGTGCACAATGAAGAAGTTTATGAT TATCTTATAGGAAAATGGGAAGAAAAGAACAATAAAAAAAAGAAATTGTTTTTACAGTATAAATACTAA
Upstream 100 bases:
>100_bases GAACTGAAGATGCTAAAATGGTATTTTTACATGGATTCGGTAAGAAATTCATCATGCAAAGATATGTTTATAGAACAAAA GCTACAGAGGGGGGTCTTAG
Downstream 100 bases:
>100_bases AAATAAATGAATTAGAGGTGTTAAAACATGAAAACTTTTGATAAAACATGGGAACAAAGGTATAGGACAATACCGGGAAA CAAATATCCTGTAACAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD YLIGKWEEKNNKKKKLFLQYKY
Sequences:
>Translated_342_residues MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD YLIGKWEEKNNKKKKLFLQYKY >Mature_342_residues MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD YLIGKWEEKNNKKKKLFLQYKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40729; Mature: 40729
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYP CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECCCCCEEEHH FMLKEIQGYDIGNKYYDIETAYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRF HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH HPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIKSKNRNMIRKAKKNGLHVEES HHHHCCCCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG CCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCC DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSF CEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH SKERADFYIGKRVHNEEVYDYLIGKWEEKNNKKKKLFLQYKY CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYP CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECCCCCEEEHH FMLKEIQGYDIGNKYYDIETAYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRF HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH HPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIKSKNRNMIRKAKKNGLHVEES HHHHCCCCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG CCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCC DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSF CEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH SKERADFYIGKRVHNEEVYDYLIGKWEEKNNKKKKLFLQYKY CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA