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The map label for this gene is yheN [H]

Identifier: 170755033

GI number: 170755033

Start: 2983741

End: 2984472

Strand: Reverse

Name: yheN [H]

Synonym: CLD_1773

Alternate gene names: 170755033

Gene position: 2984472-2983741 (Counterclockwise)

Preceding gene: 170754257

Following gene: 170756508

Centisome position: 75.4

GC content: 26.91

Gene sequence:

>732_bases
ATGAATACTAAGTTTAAAAAATCAATTTATTTACTTTTATTTTTAACTTTAATTTTTAGTGGAGTCATTGCATTTAACTA
TAAAGTTAAGGCTGATAAGAAAGAAGAAACAAGTGATAAGAAAGAAATTTATTTAACTTTCGATGATGGTCCCAGTGATA
AAACCACAGAAGATATACTTGATGTGCTAAAAGAAAATGACGTAAAAGCTACTTTTTTTATAATAGGAAAGTATATTGAA
GGTAGAGAGGATGTTCTTAAAAGGATAGTTAAAGAAGGGCATAGTTTAGGTTTACACACATATAGTCATAATTATAATAC
TATCTATCAAAATAACAAAGTTTTTATAGATGAAATGCTAAAATGCCAGAATGAAATTTATAAGGCCACAGGAGTTAAAA
CTAATATAATTAGATTTCCTGGGGGAAGCGTAAAAAGGTTAGATGAAAGATTTAAAAAGGAATTAGAAAAGGAAGGTTTT
AAAATATATGATTGGAATATGGCATTAACAGATGGCATAAATCCTAGGTCACCTGTAAGTAAATTTTATAAAGAGGGAAC
TAAGAGAAAGAAACCATTATCCAAAGTTATATTACTCATGCATTGTGATCATTTAAATAAAAATACCTGTAGAGCTTTAC
CAGATATAATTAAGTTTTATAAAGATAAAGGTTATGAATTTAAAATTATCGATAAGAATACCCCAGAATTTGTCTTTCCT
TATAGAAAATAG

Upstream 100 bases:

>100_bases
AAAAATTAAAGGAGAATAATTTAATCAATAATACTAATACTAAAAAAATATAGTAATCCTAAATACTAATATAAGAAAAA
TTTAGGAGGGATATGTTTAA

Downstream 100 bases:

>100_bases
AAATTATTGGTATAAACTTTAGCTTTACCTATATTTTATTTTTGAAGTTAACATGAATATATACCTAAGGTATTAAAAAA
TAAATTTATTATAGATTTTA

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEETSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYNTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEKEGF
KIYDWNMALTDGINPRSPVSKFYKEGTKRKKPLSKVILLMHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK

Sequences:

>Translated_243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEETSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYNTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEKEGF
KIYDWNMALTDGINPRSPVSKFYKEGTKRKKPLSKVILLMHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK
>Mature_243_residues
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEETSDKKEIYLTFDDGPSDKTTEDILDVLKENDVKATFFIIGKYIE
GREDVLKRIVKEGHSLGLHTYSHNYNTIYQNNKVFIDEMLKCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEKEGF
KIYDWNMALTDGINPRSPVSKFYKEGTKRKKPLSKVILLMHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
YRK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=133, Percent_Identity=34.5864661654135, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28515; Mature: 28515

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEETSDKKEIYLTFDDGPSDKTTEDIL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHH
DVLKENDVKATFFIIGKYIEGREDVLKRIVKEGHSLGLHTYSHNYNTIYQNNKVFIDEML
HHHHCCCCEEEEEEEEHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCEEHHHHHH
KCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEKEGFKIYDWNMALTDGINPRSPVS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECEEEECCCCCCHHHH
KFYKEGTKRKKPLSKVILLMHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECC
YRK
CCC
>Mature Secondary Structure
MNTKFKKSIYLLLFLTLIFSGVIAFNYKVKADKKEETSDKKEIYLTFDDGPSDKTTEDIL
CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHH
DVLKENDVKATFFIIGKYIEGREDVLKRIVKEGHSLGLHTYSHNYNTIYQNNKVFIDEML
HHHHCCCCEEEEEEEEHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCEEHHHHHH
KCQNEIYKATGVKTNIIRFPGGSVKRLDERFKKELEKEGFKIYDWNMALTDGINPRSPVS
HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECEEEECCCCCCHHHH
KFYKEGTKRKKPLSKVILLMHCDHLNKNTCRALPDIIKFYKDKGYEFKIIDKNTPEFVFP
HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECC
YRK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]