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The map label for this gene is pdxS [H]

Identifier: 170756508

GI number: 170756508

Start: 2983077

End: 2983394

Strand: Reverse

Name: pdxS [H]

Synonym: CLD_1774

Alternate gene names: 170756508

Gene position: 2983394-2983077 (Counterclockwise)

Preceding gene: 170755033

Following gene: 170757322

Centisome position: 75.37

GC content: 34.59

Gene sequence:

>318_bases
ATGGCAAAGGTTAGAATAGGTCATTTTGTAGAAGCTCAAATATTAGAAGCTATAGGAGTATATTATATAGATGAAAGTGA
AGTTTTAACACCAGCAGATGCAGCTTTAATGATGCAGCTAGGGTGTGATGGAATATTTGTAGGTTCTGGAATATTTAAAT
CAGATAATCCAGAAAAAAGAGCAAAAGCTATAGTTAAAGCAACAACTCATTTTAAAGATCCAGAGGTTTTAGCTAAGGTT
TCAGAGAACTTAGGAGGAGCAATGTCAGGCTTAGAAATTAGTAAGCTAGAAACAGAATTTGCTGAAAGAGGCTGGTAA

Upstream 100 bases:

>100_bases
TTAGTACGAAGTGGATAAAATAAGTTGCACTTTAAATGTATGGGTACAATTGAGACGTTGATAATCTTATGAAATAATAA
GTGCAGTTTCAATACCGGTT

Downstream 100 bases:

>100_bases
AATAAATTTATTTAAATATTAAAAAACTCTTTTTAAGTGCGTATATTAGATATGTAACTTAAAAAGAGTTTTTTACTTGG
AAAATTTCATAACAATTCCA

Product: pyridoxal biosynthesis lyase PdxS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MAKVRIGHFVEAQILEAIGVYYIDESEVLTPADAALMMQLGCDGIFVGSGIFKSDNPEKRAKAIVKATTHFKDPEVLAKV
SENLGGAMSGLEISKLETEFAERGW

Sequences:

>Translated_105_residues
MAKVRIGHFVEAQILEAIGVYYIDESEVLTPADAALMMQLGCDGIFVGSGIFKSDNPEKRAKAIVKATTHFKDPEVLAKV
SENLGGAMSGLEISKLETEFAERGW
>Mature_104_residues
AKVRIGHFVEAQILEAIGVYYIDESEVLTPADAALMMQLGCDGIFVGSGIFKSDNPEKRAKAIVKATTHFKDPEVLAKVS
ENLGGAMSGLEISKLETEFAERGW

Specific function: Involved in the production of pyridoxal phosphate, probably by incorporating ammonia into the pyridine ring [H]

COG id: COG0214

COG function: function code H; Pyridoxine biosynthesis enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdxS/SNZ family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323743, Length=83, Percent_Identity=55.421686746988, Blast_Score=94, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321049, Length=85, Percent_Identity=54.1176470588235, Blast_Score=94, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6323996, Length=85, Percent_Identity=52.9411764705882, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011060
- InterPro:   IPR001852 [H]

Pfam domain/function: PF01680 SOR_SNZ [H]

EC number: NA

Molecular weight: Translated: 11388; Mature: 11257

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS51129 PDXS_SNZ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVRIGHFVEAQILEAIGVYYIDESEVLTPADAALMMQLGCDGIFVGSGIFKSDNPEKR
CCCCCCCHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHH
AKAIVKATTHFKDPEVLAKVSENLGGAMSGLEISKLETEFAERGW
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKVRIGHFVEAQILEAIGVYYIDESEVLTPADAALMMQLGCDGIFVGSGIFKSDNPEKR
CCCCCCHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHH
AKAIVKATTHFKDPEVLAKVSENLGGAMSGLEISKLETEFAERGW
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA