BacMap

Definition	Clostridium botulinum B1 str. Okra, complete genome.
Accession	NC_010516
Length	3,958,233

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The map label for this gene is cshA [H]

Identifier: 170754257

GI number: 170754257

Start: 2984692

End: 2986266

Strand: Reverse

Name: cshA [H]

Synonym: CLD_1772

Alternate gene names: 170754257

Gene position: 2986266-2984692 (Counterclockwise)

Preceding gene: 170756680

Following gene: 170755033

Centisome position: 75.44

GC content: 28.89

Gene sequence:

>1575_bases
ATGGAAAATAAAAACTTTGAAAATTTGAACTTAAATGAAGATGTACTAAAAGCTATACAACATATGGGATTTGAAACTCC
ATCTGCAATACAAGAAAAATCAATTCCAGTAGTATTAGAAGGAGCAGATGTTATAGCTCAAGCTCAAACAGGAACAGGTA
AAACCTTAGCTTTTGGAGCTCCTGTAATAAGCGCTTTGTGTGACAATGAAAAGAAAAAAGGCGTAAAAGCTTTAGTATTA
ACACCTACAAGAGAACTAGCCCTTCAAATAAAAGATGAGCTAAAGAGATTATCTAAATATAGTAAAACAAAAGTACTTCC
TGTTTATGGAGGAGAGTCTATAGAAAGACAAATAAAAGATATTAAAAGTGGAGTAGATATAGTGGTTGGAACTCCAGGAA
GAATATTAGACCACATTAATAGAAGAACTTTAAAGCTTGGAGGTATTGATTTCCTAATTTTAGACGAAGCAGATGAAATG
CTTAATATGGGATTTATAGAAGATATAGAAACTATAATGGAAAGTACTTCTGAAGAAAAACAAACTATGCTTTTTTCAGC
TACTATGCCAGCACCTATTAAAAAATTAGCTTTAAACTATATGAAAAAAGATGTAGAGCATATAGCTATATTAAAAAAAT
CTTTAACAGTGGATAAAATAGCACAACATTATTTTGCAGTGAAAAATAAGGATAAACTAGAAGCTATATGTAGAATAATA
GATTCAGAAGAACCAGAAAGTGCTATAATATTTTGTAGAACAAAAAGAGGCGTTGATGAATTAGTTGAAGCTATGCAATC
AAAGGGATACAATGTAGAAGGTATGCATGGAGACATGAGCCAAAATCAAAGAATAAATACTTTGAAAAAATTTAAAAAAG
CTACCTTAAACTTTTTAGTTGCAACAGATGTAGCGGCTAGAGGTATAGACGTAGAAAATATATCTCATGTTATAAATTAT
GATATACCTCAAGATGCGGAATCCTATGTTCACAGAATAGGAAGAACAGGAAGAGCTGATAAAGAAGGAACAGCCTATTC
TTTAGTTACCCCTAGAGAAGTATCTTCTATTAGACAAATAGAAAGAATAATTAAGAGCAAAATCACCAAAAAAGAATTAC
CTACTTTAGAGGATATATTAGAAAAGAAATACGATAATTTATTAAATGATATAACTTCTAAAATAGAAGAAAATAAATAT
GAAAAATTTATGCCAATGGTAAAAACTTTAGAACAAAATTTTGATTTATCTGAAGTTTCAGCAGCTTTGATGGAAATGCT
ATTTAGTAAAGAAATGAGCTTTGATTATACAAATAACAAACTAGAGGCAGAAGTTCCAGTAAGATTATTTTTAAGCGTAG
GAAGAAAAGATAGTATAAATGTAAAAAGTTTATTAACATTTATTCAAGATTCATCCTCTGTAAAAAATCATGAAATTGGA
GATATAGATATATTAGATAAATTTACTTTTATGGATGTATCATCAGGCACTGCAGAAAAGATAATAAATAAATGTTCAGG
TAAAAAATTAAATAGAAGAAAAGTTAATATCGAAATAGCTAAAAGTAAAAAGTAA

Upstream 100 bases:

>100_bases
AACAACAACAGATCTTTTAGATAATTAGAAAAGATTTTTTATTGGCTGTTGATTATATGTCAACAGCCATTTTTAATTAA
CAACTAGAAAGGAACATTAT

Downstream 100 bases:

>100_bases
ATTATTTTAAATTTAGTTATTTAAAGGGGAATTACTAGAGAATTTAGAAGCTAAGAGGTAAATTTTATTTGTTTCTTAGC
TTTTGTTATTTTTTGATGTA

Product: DEAD-box ATP dependent DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDNEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSEVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDSSSVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK

Sequences:

>Translated_524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDNEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSEVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDSSSVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
>Mature_524_residues
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISALCDNEKKKGVKALVL
TPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEM
LNMGFIEDIETIMESTSEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINY
DIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKY
EKFMPMVKTLEQNFDLSEVSAALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDSSSVKNHEIG
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=39.622641509434, Blast_Score=285, Evalue=6e-77,
Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=38.5416666666667, Blast_Score=263, Evalue=2e-70,
Organism=Homo sapiens, GI13129006, Length=404, Percent_Identity=38.1188118811881, Blast_Score=261, Evalue=9e-70,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=38.7096774193548, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=35.1851851851852, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=39.247311827957, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI301171475, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=7e-66,
Organism=Homo sapiens, GI87196351, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=9e-66,
Organism=Homo sapiens, GI301171467, Length=394, Percent_Identity=34.7715736040609, Blast_Score=248, Evalue=9e-66,
Organism=Homo sapiens, GI169881239, Length=394, Percent_Identity=35.0253807106599, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI13514809, Length=394, Percent_Identity=35.0253807106599, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI224593278, Length=404, Percent_Identity=35.3960396039604, Blast_Score=245, Evalue=9e-65,
Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=36.2397820163488, Blast_Score=245, Evalue=1e-64,
Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=36.2397820163488, Blast_Score=245, Evalue=1e-64,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=36.1344537815126, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=36.1344537815126, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=34.5013477088949, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=35.73264781491, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=35.8757062146893, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI222352149, Length=343, Percent_Identity=37.9008746355685, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=35.8381502890173, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=33.9473684210526, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=33.8983050847458, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=33.8983050847458, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=33.8983050847458, Blast_Score=223, Evalue=5e-58,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=33.8983050847458, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.195530726257, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=32.7777777777778, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=32.7777777777778, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=34.6774193548387, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=34.180790960452, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI38327634, Length=403, Percent_Identity=33.0024813895782, Blast_Score=212, Evalue=9e-55,
Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=34.4632768361582, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=34.4632768361582, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=32.010582010582, Blast_Score=209, Evalue=7e-54,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=35.7142857142857, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI13514831, Length=389, Percent_Identity=31.1053984575836, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI164419732, Length=379, Percent_Identity=34.0369393139842, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=33.8753387533875, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=33.9331619537275, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=33.6760925449871, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI17505907, Length=437, Percent_Identity=30.2059496567506, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=33.9622641509434, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI38569503, Length=364, Percent_Identity=30.7692307692308, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=33.7142857142857, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=30.4347826086957, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI9506931, Length=415, Percent_Identity=27.4698795180723, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI256773275, Length=410, Percent_Identity=28.780487804878, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=33.6336336336336, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI9966805, Length=395, Percent_Identity=27.3417721518987, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI154759257, Length=462, Percent_Identity=25.3246753246753, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=29.2479108635098, Blast_Score=132, Evalue=8e-31,
Organism=Escherichia coli, GI87082221, Length=559, Percent_Identity=35.4203935599284, Blast_Score=352, Evalue=3e-98,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=41.1140583554377, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=36.8, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1787605, Length=389, Percent_Identity=34.9614395886889, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=38.3098591549296, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI48994977, Length=378, Percent_Identity=24.0740740740741, Blast_Score=89, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=39.5161290322581, Blast_Score=287, Evalue=8e-78,
Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=39.622641509434, Blast_Score=282, Evalue=3e-76,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=39.3530997304582, Blast_Score=281, Evalue=5e-76,
Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=37.1273712737127, Blast_Score=257, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=38.4408602150538, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=36.745406824147, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71995718, Length=396, Percent_Identity=36.1111111111111, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=36.604774535809, Blast_Score=242, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=35.8126721763085, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.9213483146067, Blast_Score=238, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI17510559, Length=434, Percent_Identity=33.1797235023041, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=391, Percent_Identity=35.2941176470588, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17510307, Length=391, Percent_Identity=35.2941176470588, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71995514, Length=391, Percent_Identity=35.2941176470588, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=33.4261838440111, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.3915343915344, Blast_Score=225, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=33.4261838440111, Blast_Score=224, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.3915343915344, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17507945, Length=390, Percent_Identity=34.6153846153846, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=35.8490566037736, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=376, Percent_Identity=34.3085106382979, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=33.6158192090396, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=35.8490566037736, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=33.6065573770492, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=395, Percent_Identity=31.3924050632911, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=35.2941176470588, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=35.2941176470588, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=35.2941176470588, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=396, Percent_Identity=30.3030303030303, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.6590257879656, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=31.7333333333333, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI193208216, Length=413, Percent_Identity=31.7191283292978, Blast_Score=178, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=29.6103896103896, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=30.8743169398907, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=28.0104712041885, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=28.7634408602151, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17556951, Length=349, Percent_Identity=28.9398280802292, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=430, Percent_Identity=25.3488372093023, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI25148291, Length=436, Percent_Identity=26.8348623853211, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71982862, Length=216, Percent_Identity=37.5, Blast_Score=129, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=27.3480662983425, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17557982, Length=432, Percent_Identity=25.6944444444444, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=359, Percent_Identity=23.3983286908078, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=39.0909090909091, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17565430, Length=376, Percent_Identity=23.936170212766, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=38.6920980926431, Blast_Score=266, Evalue=5e-72,
Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=36.0824742268041, Blast_Score=257, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6325138, Length=396, Percent_Identity=35.8585858585859, Blast_Score=254, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=39.3258426966292, Blast_Score=250, Evalue=4e-67,
Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=39.0835579514825, Blast_Score=249, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=39.0835579514825, Blast_Score=249, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=36.0103626943005, Blast_Score=247, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=351, Percent_Identity=36.7521367521368, Blast_Score=242, Evalue=9e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=35.2617079889807, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=366, Percent_Identity=37.1584699453552, Blast_Score=231, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6320449, Length=425, Percent_Identity=34.3529411764706, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6321963, Length=430, Percent_Identity=33.2558139534884, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=36.1878453038674, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6323947, Length=402, Percent_Identity=32.3383084577114, Blast_Score=214, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=32.5905292479109, Blast_Score=202, Evalue=8e-53,
Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=31.7647058823529, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6324620, Length=362, Percent_Identity=33.9779005524862, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6320400, Length=396, Percent_Identity=32.8282828282828, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=30.1047120418848, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=29.4117647058824, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=32.4468085106383, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=29.2161520190024, Blast_Score=159, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=186, Percent_Identity=35.4838709677419, Blast_Score=143, Evalue=8e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=28.2548476454294, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=413, Percent_Identity=27.8450363196126, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6321374, Length=400, Percent_Identity=24.75, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6323844, Length=349, Percent_Identity=23.2091690544413, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=39.8921832884097, Blast_Score=279, Evalue=3e-75,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=39.3530997304582, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=38.1615598885794, Blast_Score=254, Evalue=7e-68,
Organism=Drosophila melanogaster, GI24644487, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI45551833, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24644485, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24644483, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=38.3522727272727, Blast_Score=252, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24644479, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI281361218, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24644481, Length=392, Percent_Identity=35.4591836734694, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=36.7123287671233, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=36.0433604336043, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI21355075, Length=374, Percent_Identity=38.5026737967914, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.2941176470588, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI17985987, Length=401, Percent_Identity=34.9127182044888, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24662330, Length=353, Percent_Identity=36.5439093484419, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=34.3007915567282, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=33.5120643431635, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=33.5120643431635, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI21356161, Length=463, Percent_Identity=33.4773218142549, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.195530726257, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI28575014, Length=416, Percent_Identity=30.5288461538462, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=34.5609065155807, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=32.133676092545, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI28571808, Length=368, Percent_Identity=31.5217391304348, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28571809, Length=368, Percent_Identity=31.5217391304348, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=34.5714285714286, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=35.3697749196142, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI20130173, Length=466, Percent_Identity=27.2532188841202, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI28571338, Length=421, Percent_Identity=30.8788598574822, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI18859659, Length=421, Percent_Identity=30.8788598574822, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355559, Length=397, Percent_Identity=32.4937027707809, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=32, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI17647335, Length=382, Percent_Identity=28.5340314136126, Blast_Score=172, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=30.1104972375691, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=27.8772378516624, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI19920478, Length=364, Percent_Identity=25, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI17136666, Length=421, Percent_Identity=24.2280285035629, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=23.9316239316239, Blast_Score=121, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 58962; Mature: 58962

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH
PVISALCDNEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
HHHHHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTSEEK
HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH
QTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH
ERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSEVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDSSSVKNHEIG
HHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
CEEHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECCHHEEECCCCCCCEEEEHH
PVISALCDNEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
HHHHHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHH
IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTSEEK
HHCCCEEEECCCHHHHHHHCHHEEEECCEEEEEECCHHHHHHCCHHHHHHHHHHCCCHHH
QTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHH
ERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSEVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AALMEMLFSKEMSFDYTNNKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDSSSVKNHEIG
HHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
DIDILDKFTFMDVSSGTAEKIINKCSGKKLNRRKVNIEIAKSKK
CEEHHCCEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]