Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754787

Identifier: 170754787

GI number: 170754787

Start: 436101

End: 437591

Strand: Direct

Name: 170754787

Synonym: CLD_0397

Alternate gene names: NA

Gene position: 436101-437591 (Clockwise)

Preceding gene: 170754453

Following gene: 170757483

Centisome position: 11.02

GC content: 24.88

Gene sequence:

>1491_bases
ATGAGAAAAAGTAAAATTCTATTAATATTTATGATTTTTATTTATTCATTAACTATAACTGCCTGTGTGAATTTAGATAA
TAAAAATAATATAGTAGCTCCCAATAACAATTCTTGTCCCATTGAAGGAACGTGGCAATTTGATTTTAGTAATTTAGATA
AAGATAGTAAATTAAGATTAAGGCTAAAGAATAAAGATGTGATTATAAATTCCAAGTATATAATATTAGGAAATGAAGTA
TGCAAATCACCTGATTTTAAGGTTAAAACTGTAAAAACAGAGGAGTATTTTTTATATAAATTAAGATTAAATCCCAATAA
ATTAAATTTAGATAAAAAAGAAATAGAAGTTATTTCAACTTCTTCGGATAATAATCCTTTCTATGATTTTATAAAAATAG
ATGAAAAAAAATTGTTAGTATATGTAGATAATCAATTGCTGGTTTTAACAAAAAAATCCAATAGCTCATCTATTGAACCT
AAGCACAATACAATAGAAAAAAACTCACAACAGGATATAGTAATGCCAAAGAGATATACATTGCTAAGAACTGGCGTATT
GATAGGATTAAAAAGTTCAAAAGAAGATTACGTAGATGAGTATAAGAATGAAAAAAAATATAGAACTATTTTTATTTCTT
CCCGAAATAAAAATCTAAAGAATGTAATAGAGACTGAAAACCTATTTGTGCCTAGAAAAGATGGATTTTGTGAAATTGGA
GTAAATAGAATAAATAATTCAAGTAATATACAAGATGCTATATTTGTAAACCCATTATACAATAATTACCCAATAAAAAA
TAATTTTAGACTAGAACAGGATATTAAAAATAAAAGCATATATAGAGATATATTATTTGTAAGTAATGATTACATATCTA
TAGAATATAACGATATTAATAAAGATAAGCCTATAGATTTATATAAAGTTAAAATGCTACCTATTGACAACATAAATGCA
ATGGCAGGGGTAAATATAGGTGATATAATAGACAAGGATAGTGAAAAAATATTAGCATCATCCTTAGAAAGTTGCATTAG
ATCTAAGGATAAAGATATTTTAAATAAATTAGAAAGAAGTTGTAGAAAAGATAGTTTTTTTCTTAATAGAAGAAATGGAC
ACTGGATACTTAAGGGTAGATTAAATGGAATAGATGATAAGGAAGAATACATAGATTTTAATATAAATACTGAAATACCT
GAAAAAATATTGAATTATGATGATTTAAATTTGTCTTGGAATAGTATTAAAAGTAAAGTTCCTAACGCCTTAGATGCATA
TACTTCTCCTAATAAAGATTTAGCTATAATAACTACAGAGAAGGAGTTATATGTATATACCATAGAGGATGGAAAACTAT
CCAACAAAGCTATTTATGAGATGGAGTTAAATAAAGAAACTGTAGTTATGGCAGAATGGGCTACAGCAGATTACGCTAAA
AAATGGACAGATAGTATTTTAAAAAACAAAAATGCACATATAATAAAATAA

Upstream 100 bases:

>100_bases
CTACTATATCAATAAAATTACCAATGATAAAACTATGATATAAATTTATTTTATATTTAAATATAATTAATATTAATTTA
ATGTAACTAGGAGAATTCAT

Downstream 100 bases:

>100_bases
TAAAGATATAAATGTTTTAATTATAAAAAGGAAATGGTGAAGAATGTCAAAAGAAAAGTTTAATAACGCAGTTAACATAG
CAAAATATATATGTGAAAAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTWQFDFSNLDKDSKLRLRLKNKDVIINSKYIILGNEV
CKSPDFKVKTVKTEEYFLYKLRLNPNKLNLDKKEIEVISTSSDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEP
KHNTIEKNSQQDIVMPKRYTLLRTGVLIGLKSSKEDYVDEYKNEKKYRTIFISSRNKNLKNVIETENLFVPRKDGFCEIG
VNRINNSSNIQDAIFVNPLYNNYPIKNNFRLEQDIKNKSIYRDILFVSNDYISIEYNDINKDKPIDLYKVKMLPIDNINA
MAGVNIGDIIDKDSEKILASSLESCIRSKDKDILNKLERSCRKDSFFLNRRNGHWILKGRLNGIDDKEEYIDFNINTEIP
EKILNYDDLNLSWNSIKSKVPNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAIYEMELNKETVVMAEWATADYAK
KWTDSILKNKNAHIIK

Sequences:

>Translated_496_residues
MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTWQFDFSNLDKDSKLRLRLKNKDVIINSKYIILGNEV
CKSPDFKVKTVKTEEYFLYKLRLNPNKLNLDKKEIEVISTSSDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEP
KHNTIEKNSQQDIVMPKRYTLLRTGVLIGLKSSKEDYVDEYKNEKKYRTIFISSRNKNLKNVIETENLFVPRKDGFCEIG
VNRINNSSNIQDAIFVNPLYNNYPIKNNFRLEQDIKNKSIYRDILFVSNDYISIEYNDINKDKPIDLYKVKMLPIDNINA
MAGVNIGDIIDKDSEKILASSLESCIRSKDKDILNKLERSCRKDSFFLNRRNGHWILKGRLNGIDDKEEYIDFNINTEIP
EKILNYDDLNLSWNSIKSKVPNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAIYEMELNKETVVMAEWATADYAK
KWTDSILKNKNAHIIK
>Mature_496_residues
MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTWQFDFSNLDKDSKLRLRLKNKDVIINSKYIILGNEV
CKSPDFKVKTVKTEEYFLYKLRLNPNKLNLDKKEIEVISTSSDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEP
KHNTIEKNSQQDIVMPKRYTLLRTGVLIGLKSSKEDYVDEYKNEKKYRTIFISSRNKNLKNVIETENLFVPRKDGFCEIG
VNRINNSSNIQDAIFVNPLYNNYPIKNNFRLEQDIKNKSIYRDILFVSNDYISIEYNDINKDKPIDLYKVKMLPIDNINA
MAGVNIGDIIDKDSEKILASSLESCIRSKDKDILNKLERSCRKDSFFLNRRNGHWILKGRLNGIDDKEEYIDFNINTEIP
EKILNYDDLNLSWNSIKSKVPNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAIYEMELNKETVVMAEWATADYAK
KWTDSILKNKNAHIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57678; Mature: 57678

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTWQFDFSNLDKDSKLRL
CCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCCCEEEE
RLKNKDVIINSKYIILGNEVCKSPDFKVKTVKTEEYFLYKLRLNPNKLNLDKKEIEVIST
EECCCEEEEECEEEEECHHHHCCCCCEEEEEEECEEEEEEEEECCCCCCCCHHHEEEEEE
SSDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEPKHNTIEKNSQQDIVMPKRYT
CCCCCCEEEEEEECCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCHHE
LLRTGVLIGLKSSKEDYVDEYKNEKKYRTIFISSRNKNLKNVIETENLFVPRKDGFCEIG
EEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCEEEEC
VNRINNSSNIQDAIFVNPLYNNYPIKNNFRLEQDIKNKSIYRDILFVSNDYISIEYNDIN
CEECCCCCCCCEEEEEEECCCCCCCCCCCEEHHHHCCHHHEEEEEEEECCEEEEEECCCC
KDKPIDLYKVKMLPIDNINAMAGVNIGDIIDKDSEKILASSLESCIRSKDKDILNKLERS
CCCCCEEEEEEEEEECCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
CRKDSFFLNRRNGHWILKGRLNGIDDKEEYIDFNINTEIPEKILNYDDLNLSWNSIKSKV
HCCCCEEEECCCCCEEEEECCCCCCCCHHEEEEECCCCCHHHHCCCCCCCCCHHHHHHHC
PNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAIYEMELNKETVVMAEWATADYAK
CCHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHH
KWTDSILKNKNAHIIK
HHHHHHHCCCCCEEEC
>Mature Secondary Structure
MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTWQFDFSNLDKDSKLRL
CCCCCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCCCEEEE
RLKNKDVIINSKYIILGNEVCKSPDFKVKTVKTEEYFLYKLRLNPNKLNLDKKEIEVIST
EECCCEEEEECEEEEECHHHHCCCCCEEEEEEECEEEEEEEEECCCCCCCCHHHEEEEEE
SSDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEPKHNTIEKNSQQDIVMPKRYT
CCCCCCEEEEEEECCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCHHE
LLRTGVLIGLKSSKEDYVDEYKNEKKYRTIFISSRNKNLKNVIETENLFVPRKDGFCEIG
EEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCEEEEC
VNRINNSSNIQDAIFVNPLYNNYPIKNNFRLEQDIKNKSIYRDILFVSNDYISIEYNDIN
CEECCCCCCCCEEEEEEECCCCCCCCCCCEEHHHHCCHHHEEEEEEEECCEEEEEECCCC
KDKPIDLYKVKMLPIDNINAMAGVNIGDIIDKDSEKILASSLESCIRSKDKDILNKLERS
CCCCCEEEEEEEEEECCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
CRKDSFFLNRRNGHWILKGRLNGIDDKEEYIDFNINTEIPEKILNYDDLNLSWNSIKSKV
HCCCCEEEECCCCCEEEEECCCCCCCCHHEEEEECCCCCHHHHCCCCCCCCCHHHHHHHC
PNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAIYEMELNKETVVMAEWATADYAK
CCHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCHHHHH
KWTDSILKNKNAHIIK
HHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA