Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754607

Identifier: 170754607

GI number: 170754607

Start: 2821194

End: 2821775

Strand: Reverse

Name: 170754607

Synonym: CLD_1927

Alternate gene names: NA

Gene position: 2821775-2821194 (Counterclockwise)

Preceding gene: 170755157

Following gene: 170756347

Centisome position: 71.29

GC content: 29.21

Gene sequence:

>582_bases
ATGAATAGTAATATATATTACAGAAAAAAGCACTCATATAAGAATAGACCCTATTATTGTCCTATAAACAACATGTGGTT
TTACCCATATATGTATATGAATCCATATACATCTTATATGCTTAACCCTTTTATGACTCCATATACGGATCCTTATATGA
TGAATGCATATTACGGGAATATGTGCTCTTATAAGGATAAAGCTCAATGTAGGGCCACTAGAGCTTATGGTGCAGATAAT
TATGGGTTCACAAAGGAAAATATATATCCAAAGCAATATCAAAAAGAAGTTTATATGAAAGAAGAAAATAAGAAAAGATT
TTACGAGGAAGATTCTTTAGATGATATGGTAATATTTAATGAAGATGGCGAAAATGAACATATTAAAAAAGAAAAAAAAT
TAGATAGGGCACAAGAGAAAATTTATGATTCAGATTTAGAGCCTGCTTTTACAGAAAAAAAGGAGATTCAGCTAGAGAAA
ATTAATAAAGAGGCAGAAGTAGATGAATCAAAAGAAAAAGAACCATATAGAGGGATAAAAATAAATATGAGAAAGGTTCC
GTTAAAGGAAATAACAGATTAG

Upstream 100 bases:

>100_bases
AAATTTTTTCTGTAAACAAATAAAAAATTAATCATATAATGTGTTGTAAGGAATTATATTTAAAGTATAAGGTTAATAAT
AATTTATAGGGGGATTTATA

Downstream 100 bases:

>100_bases
AGTAGTCTTTCTACAGATCGTAATATCTTAATCTGTAAAAAAATTAAAATAAAGGTATTTTAATTTAAATAAATAGCTAC
AAAAATAAAGCATTTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN
YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK
INKEAEVDESKEKEPYRGIKINMRKVPLKEITD

Sequences:

>Translated_193_residues
MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN
YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK
INKEAEVDESKEKEPYRGIKINMRKVPLKEITD
>Mature_193_residues
MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN
YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK
INKEAEVDESKEKEPYRGIKINMRKVPLKEITD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23571; Mature: 23571

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGN
CCCCEEEEECCCCCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEHHHHCC
MCSYKDKAQCRATRAYGADNYGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFN
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEC
EDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEKINKEAEVDESKEKEPYRGIK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCEE
INMRKVPLKEITD
EEEEECCHHHCCC
>Mature Secondary Structure
MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGN
CCCCEEEEECCCCCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEHHHHCC
MCSYKDKAQCRATRAYGADNYGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFN
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEC
EDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEKINKEAEVDESKEKEPYRGIK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCEE
INMRKVPLKEITD
EEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA