Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170757251

Identifier: 170757251

GI number: 170757251

Start: 1268242

End: 1268823

Strand: Direct

Name: 170757251

Synonym: CLD_3423

Alternate gene names: NA

Gene position: 1268242-1268823 (Clockwise)

Preceding gene: 170754586

Following gene: 170756660

Centisome position: 32.04

GC content: 24.05

Gene sequence:

>582_bases
ATGAGTGAAATTATAAATTTTAATGATTTAAAAAATAAAGCAACAGACAAAGATCTAGATAAATTTGAGCAATATATGTA
TAGTCTTTATAGTTCAGTAGTTCAGGGAACTTTAACTATGTCTGACTTTATGGAAAAAATACAAGAATATATGGAAAAAA
ACAATATATCTCAGGAAAAGTTTGTAAATATACAAAAAAAATTAATGGAAAAATATACAGACGCTTATGGGATAGATTTT
AAAGATGTGGAAAAACAAATGAAAGATTTGGGAGTGGATGTAAAAGGCTTAGGATTAAATGCAGAGAGTTTTAGTTATGA
AAATGTTAAAAAAAACATAAGTTTCCACGAAAAATACAATGCAAAGCCAGTAGTCAAACAAGTTACAGAATATCATATTA
AAAATGATAAAAATGATGTTAAAGTGGAATTAATAGGAGAGAATATATTTCTTAAAAGTAGCAAAAAAATAGATTTAAAG
GATACTGAGTTAAATGAATTCTTATGTTCTTATAAAAAACTTTTTGATGATAAACAATTATATATAACTGTTTGTGAAAG
TATAACTAGTTATAATTATTAG

Upstream 100 bases:

>100_bases
TATAACTTTAAATTATAACTGGAAATTAGCATAAAGTCTAAATTAAGAGCTGAAATTTTAAAATAAATGTAATTTATATA
TTCTAGAAAGGAAGAAAAAA

Downstream 100 bases:

>100_bases
TATAAAAAAAGTATTATTATTTTGGCATAATAATGGTCATATATGCTAATAGTTTTATAATATTAAAAACAAGTTTAACG
ATATAAAAGTAACACTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFMEKIQEYMEKNNISQEKFVNIQKKLMEKYTDAYGIDF
KDVEKQMKDLGVDVKGLGLNAESFSYENVKKNISFHEKYNAKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLK
DTELNEFLCSYKKLFDDKQLYITVCESITSYNY

Sequences:

>Translated_193_residues
MSEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFMEKIQEYMEKNNISQEKFVNIQKKLMEKYTDAYGIDF
KDVEKQMKDLGVDVKGLGLNAESFSYENVKKNISFHEKYNAKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLK
DTELNEFLCSYKKLFDDKQLYITVCESITSYNY
>Mature_192_residues
SEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFMEKIQEYMEKNNISQEKFVNIQKKLMEKYTDAYGIDFK
DVEKQMKDLGVDVKGLGLNAESFSYENVKKNISFHEKYNAKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLKD
TELNEFLCSYKKLFDDKQLYITVCESITSYNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22709; Mature: 22578

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFMEKIQEYMEKNNISQEK
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FVNIQKKLMEKYTDAYGIDFKDVEKQMKDLGVDVKGLGLNAESFSYENVKKNISFHEKYN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHCCCHHHHCC
AKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLKDTELNEFLCSYKKLFDDKQL
CCHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH
YITVCESITSYNY
HHHHHHHHHCCCC
>Mature Secondary Structure 
SEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFMEKIQEYMEKNNISQEK
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FVNIQKKLMEKYTDAYGIDFKDVEKQMKDLGVDVKGLGLNAESFSYENVKKNISFHEKYN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHCCCHHHHCC
AKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLKDTELNEFLCSYKKLFDDKQL
CCHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH
YITVCESITSYNY
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA