Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170754252

Identifier: 170754252

GI number: 170754252

Start: 1593195

End: 1593758

Strand: Direct

Name: 170754252

Synonym: CLD_3115

Alternate gene names: NA

Gene position: 1593195-1593758 (Clockwise)

Preceding gene: 170755789

Following gene: 170755815

Centisome position: 40.25

GC content: 25.0

Gene sequence:

>564_bases
ATGCAAAAGTTGTTTTGTAATATTTGTGGTATAGAAATAAATGAAAGAAATTATAATTTAAATAAGGAAGCTTTTTCAGA
TAAAAATACTACTGATTCTATAAAATTTTGTCCTATATGTGGAGCACCCATAAAATATTTAAGTAAGGAAAGGTTTATAT
ATAAGTTAGAAGATAAAGAATTAAATAAAGAAGTGGTTAAAATATTAGACCATGCTGTAAAATTAGAAGTATTCAATGGA
GATTTTTATAAAAAGGCTTCAGAATTAGCTAAGAATGAAAAGATATCAAAATTATTTAAGGCCTTAGCGAATATTGAATA
TGGTCATGCTATGGTTCACAAAAATTTAGCGGGAATAAGAGAAATGCCTAAACTTGCTGCAATAAATTATGATAAATATG
ATACTGACAGTATACTATTAGAAATGGCTGAAAAAAGAGAAGAACATGCTGTTAATTATTATAACAAATATGGTAAAGAT
ATTAATTCGAAGTCATTAAATATAGTTTTTGAAGCTTTGAAAAATGTGGAGATAGATCATATACATATAATAAATGAAAA
ATAG

Upstream 100 bases:

>100_bases
GTTATATTATATAATAAAGTTGGGAGTTTATTCTAGGTGTATAATCCCTAATAGTTTTATGACATATTGTATAGAACAAT
TAATCACAGGAGGGGAAGTT

Downstream 100 bases:

>100_bases
AACTTAGATTTAACTAAGTTCTATTTTTTAACCCTTTGTACTTTTTTAACCTTTTGAATATTACCTTCCATAGGGATTAA
ATCCTTCTTTGTAGTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG
DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD
INSKSLNIVFEALKNVEIDHIHIINEK

Sequences:

>Translated_187_residues
MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG
DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD
INSKSLNIVFEALKNVEIDHIHIINEK
>Mature_187_residues
MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG
DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD
INSKSLNIVFEALKNVEIDHIHIINEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21713; Mature: 21713

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKE
CCCCEEEECCEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCHH
LNKEVVKILDHAVKLEVFNGDFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIR
HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKDINSKSLNIVFEALKNVEIDH
HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEE
IHIINEK
EEEECCC
>Mature Secondary Structure
MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKE
CCCCEEEECCEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCHH
LNKEVVKILDHAVKLEVFNGDFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIR
HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKDINSKSLNIVFEALKNVEIDH
HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEE
IHIINEK
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA