| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751692
Identifier: 170751692
GI number: 170751692
Start: 5630675
End: 5632120
Strand: Direct
Name: 170751692
Synonym: Mrad2831_5322
Alternate gene names: NA
Gene position: 5630675-5632120 (Clockwise)
Preceding gene: 170751691
Following gene: 170751693
Centisome position: 92.64
GC content: 73.31
Gene sequence:
>1446_bases ATGCAGGACGCGCGACAGGACGGCATCACCGCCATGGGCGCCGTGGACCTCGCCGCCGCCATCCGCGGCCGGGTCGTCTC CTGCGTCGAGGTGATGCGCGCCTATCTGGAGCGGATCCATCGGATCAACCCGCAGGTGAACGCCCTCGTGGGCCTGGCCG ACGACGCCGCGCTCCTGCGGGAGGCCGAGGCCGCCGACGCCGTCCTGGCGCGCGGTGAGCCCGTCGGCCCGCTGCACGGC TTCCCGCTGGCGGTGAAGGATCTCGACCCGGTCCGCGGCCTGCGGTTCACGCAGGGCTCGCCGATCTTCGCCGACCGGGT CGCCGAGACGGACTCGATCATGGTCACCCGCCTGCGCGCCGCCGGGGCGATCTTCATCGGCAAGACCAACATCCCCGAGT TCGGCCTCGGCTCGCACAGCTTCAACCCGGTCTACGGCGCCACCGGCAACGCCTACGACCCGGCGATGACCGGGGGCGGG TCGAGCGGCGGCGCCGCCGTGGCGGTGGCGCTGCGGATGCAGCCGGTGGCCGACGGCAGCGACCATGCCGGCTCCCTGCG GAATCCGCCCGCCTTCAACAACTGCTACGGCCTGCGCCCGAGCTGGGGCCGGATCCCGGCCGAGGCCAAGGACGTGTTCA GCCCGAATCTCGGCGTGCTCGGGGCGATCGGGCGCACGCCGGGCGATATCGGCCTGATGCTCTCGGTGCTGGCGGGCTAC GATCCGCGCTGCCCGAACGCCGTCCGGCAGGACCCGTCCGCCTTCGCGCGCCCGCTCGCCCGCGACTTCCGCGGGACGCG GATCGCGTGGCTCGGCGATTGCGGCGGCGAGATCCCGTTCGATCCCGGCGTGCTCGATGTCGGGCGCGCCGCCCTGGCGA CCTTCGCGGAGATCGGCTGCACCGTCGAGGAGGCGATGCCGCGCTACGACATGGAGCGGCTCTGGCAGGACTGGCTGGTG CTGCGGGCCCTCACCGTCGCGGCGAACCTCCGCCCGCTCTACGACGAGCCCCGCCACCGGGCCCTGCTCAAGCCGGAGGC GGTCTGGGAGGTCGAGCGGGGACTGGCGCTCGGCGCCGACCGGATCATCGCGGCGCTGGAGGGGCGCACCCGCTGGTACG AGACCCTGCGCCGCTTCATGGAGGCCTACGACTACGTGGTCATGCCCAGCGCCCAGGTCTTCCCGTTCGACAAGAGCCTG CGCTGGCCCGAGACCGTGGGCGGCCACGCGATGGACACCTACCACCGCTGGATGCAGATCACGATTCCCGCGACGATGTC GGGCCTGCCGGCGCTGGCCGTGCCGGCCGGGTTCGGGGAGGCCGGGCTGCCCGCGGGCATCCAGATCGTCGGTCCCAACC ACGGCGAGCTCGCCTGCCTGCAGCTCGGTGCCGCCTACGACGCGGCGAGCAACTGGGTCCGCCGCTACCCGCCGCCGCTG AACTGA
Upstream 100 bases:
>100_bases ACCCAGACGGATACCGGCCAGCCATCTAATCGGCCGAAGCCATCTTTGCCCGGATCCAACCTCCGGTTACCGATCGTCCG TCGATCCGGAGGAGGGTAAG
Downstream 100 bases:
>100_bases GGGAGCGGCTCGTCGACCAAGCCGGCGCAAACAAGCGCCGGACGCGTTGACCCGCCCCGCGCTCTCCGCTAAGAGGCCCG ACACTTCGCGTGCCGACCAT
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MQDARQDGITAMGAVDLAAAIRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLREAEAADAVLARGEPVGPLHG FPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRAAGAIFIGKTNIPEFGLGSHSFNPVYGATGNAYDPAMTGGG SSGGAAVAVALRMQPVADGSDHAGSLRNPPAFNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGY DPRCPNAVRQDPSAFARPLARDFRGTRIAWLGDCGGEIPFDPGVLDVGRAALATFAEIGCTVEEAMPRYDMERLWQDWLV LRALTVAANLRPLYDEPRHRALLKPEAVWEVERGLALGADRIIAALEGRTRWYETLRRFMEAYDYVVMPSAQVFPFDKSL RWPETVGGHAMDTYHRWMQITIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELACLQLGAAYDAASNWVRRYPPPL N
Sequences:
>Translated_481_residues MQDARQDGITAMGAVDLAAAIRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLREAEAADAVLARGEPVGPLHG FPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRAAGAIFIGKTNIPEFGLGSHSFNPVYGATGNAYDPAMTGGG SSGGAAVAVALRMQPVADGSDHAGSLRNPPAFNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGY DPRCPNAVRQDPSAFARPLARDFRGTRIAWLGDCGGEIPFDPGVLDVGRAALATFAEIGCTVEEAMPRYDMERLWQDWLV LRALTVAANLRPLYDEPRHRALLKPEAVWEVERGLALGADRIIAALEGRTRWYETLRRFMEAYDYVVMPSAQVFPFDKSL RWPETVGGHAMDTYHRWMQITIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELACLQLGAAYDAASNWVRRYPPPL N >Mature_481_residues MQDARQDGITAMGAVDLAAAIRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLREAEAADAVLARGEPVGPLHG FPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRAAGAIFIGKTNIPEFGLGSHSFNPVYGATGNAYDPAMTGGG SSGGAAVAVALRMQPVADGSDHAGSLRNPPAFNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGY DPRCPNAVRQDPSAFARPLARDFRGTRIAWLGDCGGEIPFDPGVLDVGRAALATFAEIGCTVEEAMPRYDMERLWQDWLV LRALTVAANLRPLYDEPRHRALLKPEAVWEVERGLALGADRIIAALEGRTRWYETLRRFMEAYDYVVMPSAQVFPFDKSL RWPETVGGHAMDTYHRWMQITIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELACLQLGAAYDAASNWVRRYPPPL N
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=488, Percent_Identity=27.8688524590164, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI222831590, Length=492, Percent_Identity=24.5934959349593, Blast_Score=96, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17543272, Length=453, Percent_Identity=25.60706401766, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17537465, Length=256, Percent_Identity=29.296875, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17538252, Length=206, Percent_Identity=32.5242718446602, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17556264, Length=304, Percent_Identity=28.9473684210526, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538254, Length=200, Percent_Identity=30, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17556276, Length=299, Percent_Identity=28.0936454849498, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17556278, Length=299, Percent_Identity=28.0936454849498, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71990152, Length=304, Percent_Identity=25.9868421052632, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319685, Length=438, Percent_Identity=27.6255707762557, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320448, Length=205, Percent_Identity=29.2682926829268, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648435, Length=493, Percent_Identity=26.369168356998, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI24648437, Length=493, Percent_Identity=26.369168356998, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI45550774, Length=493, Percent_Identity=26.369168356998, Blast_Score=115, Evalue=9e-26, Organism=Drosophila melanogaster, GI24652985, Length=246, Percent_Identity=35.3658536585366, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI19922090, Length=246, Percent_Identity=35.3658536585366, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24652981, Length=246, Percent_Identity=35.3658536585366, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24652983, Length=246, Percent_Identity=35.3658536585366, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI161078093, Length=510, Percent_Identity=24.7058823529412, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24644968, Length=241, Percent_Identity=30.2904564315353, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24648113, Length=451, Percent_Identity=24.8337028824834, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356731, Length=210, Percent_Identity=33.8095238095238, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24648441, Length=427, Percent_Identity=23.4192037470726, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648439, Length=427, Percent_Identity=23.4192037470726, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 51671; Mature: 51671
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDARQDGITAMGAVDLAAAIRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLR CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHH EAEAADAVLARGEPVGPLHGFPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRA HHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHH AGAIFIGKTNIPEFGLGSHSFNPVYGATGNAYDPAMTGGGSSGGAAVAVALRMQPVADGS CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC DHAGSLRNPPAFNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC DPRCPNAVRQDPSAFARPLARDFRGTRIAWLGDCGGEIPFDPGVLDVGRAALATFAEIGC CCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC TVEEAMPRYDMERLWQDWLVLRALTVAANLRPLYDEPRHRALLKPEAVWEVERGLALGAD CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCHHHCHH RIIAALEGRTRWYETLRRFMEAYDYVVMPSAQVFPFDKSLRWPETVGGHAMDTYHRWMQI HHHHHHCCCHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCHHCCCCHHHHHHCEEEE TIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELACLQLGAAYDAASNWVRRYPPPL EECHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCC N C >Mature Secondary Structure MQDARQDGITAMGAVDLAAAIRGRVVSCVEVMRAYLERIHRINPQVNALVGLADDAALLR CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHH EAEAADAVLARGEPVGPLHGFPLAVKDLDPVRGLRFTQGSPIFADRVAETDSIMVTRLRA HHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHH AGAIFIGKTNIPEFGLGSHSFNPVYGATGNAYDPAMTGGGSSGGAAVAVALRMQPVADGS CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC DHAGSLRNPPAFNNCYGLRPSWGRIPAEAKDVFSPNLGVLGAIGRTPGDIGLMLSVLAGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHCC DPRCPNAVRQDPSAFARPLARDFRGTRIAWLGDCGGEIPFDPGVLDVGRAALATFAEIGC CCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC TVEEAMPRYDMERLWQDWLVLRALTVAANLRPLYDEPRHRALLKPEAVWEVERGLALGAD CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCHHHCHH RIIAALEGRTRWYETLRRFMEAYDYVVMPSAQVFPFDKSLRWPETVGGHAMDTYHRWMQI HHHHHHCCCHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCHHCCCCHHHHHHCEEEE TIPATMSGLPALAVPAGFGEAGLPAGIQIVGPNHGELACLQLGAAYDAASNWVRRYPPPL EECHHCCCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]