| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is pyrE [H]
Identifier: 170751690
GI number: 170751690
Start: 5628674
End: 5629375
Strand: Direct
Name: pyrE [H]
Synonym: Mrad2831_5320
Alternate gene names: 170751690
Gene position: 5628674-5629375 (Clockwise)
Preceding gene: 170751689
Following gene: 170751691
Centisome position: 92.61
GC content: 66.52
Gene sequence:
>702_bases ATGACCAGTCCCTTCCTGCCCCTCGACCGGACAGTGATCGCCCGCGAGGCGGCCAAGATGTTCCTCGAGATCGGGGCCGT CCTCTTCTACAAGGACGAGCCGTTCAAGTTCACCTCCGGCTGGGCGAGCCCGGTCTACACCGACAGCCGGAAGATCATCT CGTTCCCGCGCCTGCGCTCGACGCTGATGGATTTCGCCACCGCCACGATCGTGCGCGAGATCGGCTACGAGAAGCTGACC CACATCGCGGGCGGCGAGACCGCCGGCATCCCCTTCGCGGCCTGGATCGCCGACCGGATGATGCTGCCGATGCAGTACAT CCGGAAGAAGCCCAAGGGCTTCGGCCGCAACGCCCAGATCGAGGGCGAGATCGTCGAGGGCGCCCGGACCCTGCTGGTCG AGGACCTCGCCACCGACGGGCGCAGCAAGGTCAATTTCTGCAAGGCCCTGCGCGATTCCGGCGCCCAGGTCGATCACTGC TTCGTGCTGTTCTACTACGACATCTTCCCCGACAGCGCCGCGCTGATGGAGGAGATCGGCATCAAGCTCCACTACCTCAC CACGTGGTGGGACGTGCTGGCGGTGGCCAAGGAGATGGGCACCTTCGACCCGAAGACCCTGGCGGAGGTCGAGCGCTTCC TCAACGCCCCGGCGGAGTGGTCGGCGGCCCACGGCGGCATCTCCGCCTTCGGCCAGGCCTGA
Upstream 100 bases:
>100_bases GGGGGAGGAGGGCGGTCAGGCCCTTATTCAACGCGTTCTCCCCGGCCGGACCGGTCTACCGGACCGGCGGAGGACGTCTC GAGCGGAGCGCGCACGCCGC
Downstream 100 bases:
>100_bases GGAGAGGATCGCGATGGGCGTCGCCGAGCTGTTCCCCGCCGAGCGCCAGGAGGCGAACCCGGTCGACCGGATCACGATCC GCCGGCCGGACGACTGGCAC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTSPFLPLDRTVIAREAAKMFLEIGAVLFYKDEPFKFTSGWASPVYTDSRKIISFPRLRSTLMDFATATIVREIGYEKLT HIAGGETAGIPFAAWIADRMMLPMQYIRKKPKGFGRNAQIEGEIVEGARTLLVEDLATDGRSKVNFCKALRDSGAQVDHC FVLFYYDIFPDSAALMEEIGIKLHYLTTWWDVLAVAKEMGTFDPKTLAEVERFLNAPAEWSAAHGGISAFGQA
Sequences:
>Translated_233_residues MTSPFLPLDRTVIAREAAKMFLEIGAVLFYKDEPFKFTSGWASPVYTDSRKIISFPRLRSTLMDFATATIVREIGYEKLT HIAGGETAGIPFAAWIADRMMLPMQYIRKKPKGFGRNAQIEGEIVEGARTLLVEDLATDGRSKVNFCKALRDSGAQVDHC FVLFYYDIFPDSAALMEEIGIKLHYLTTWWDVLAVAKEMGTFDPKTLAEVERFLNAPAEWSAAHGGISAFGQA >Mature_232_residues TSPFLPLDRTVIAREAAKMFLEIGAVLFYKDEPFKFTSGWASPVYTDSRKIISFPRLRSTLMDFATATIVREIGYEKLTH IAGGETAGIPFAAWIADRMMLPMQYIRKKPKGFGRNAQIEGEIVEGARTLLVEDLATDGRSKVNFCKALRDSGAQVDHCF VLFYYDIFPDSAALMEEIGIKLHYLTTWWDVLAVAKEMGTFDPKTLAEVERFLNAPAEWSAAHGGISAFGQA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=205, Percent_Identity=30.2439024390244, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17508631, Length=121, Percent_Identity=32.2314049586777, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI17933654, Length=202, Percent_Identity=29.2079207920792, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 26017; Mature: 25886
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPFLPLDRTVIAREAAKMFLEIGAVLFYKDEPFKFTSGWASPVYTDSRKIISFPRLRS CCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHH TLMDFATATIVREIGYEKLTHIAGGETAGIPFAAWIADRMMLPMQYIRKKPKGFGRNAQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE EGEIVEGARTLLVEDLATDGRSKVNFCKALRDSGAQVDHCFVLFYYDIFPDSAALMEEIG CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEEEEEHHCCCHHHHHHHHC IKLHYLTTWWDVLAVAKEMGTFDPKTLAEVERFLNAPAEWSAAHGGISAFGQA CEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHCCCC >Mature Secondary Structure TSPFLPLDRTVIAREAAKMFLEIGAVLFYKDEPFKFTSGWASPVYTDSRKIISFPRLRS CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHH TLMDFATATIVREIGYEKLTHIAGGETAGIPFAAWIADRMMLPMQYIRKKPKGFGRNAQI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE EGEIVEGARTLLVEDLATDGRSKVNFCKALRDSGAQVDHCFVLFYYDIFPDSAALMEEIG CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEEEEEHHCCCHHHHHHHHC IKLHYLTTWWDVLAVAKEMGTFDPKTLAEVERFLNAPAEWSAAHGGISAFGQA CEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA