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The map label for this gene is cycH [H]

Identifier: 170751372

GI number: 170751372

Start: 5311458

End: 5312945

Strand: Direct

Name: cycH [H]

Synonym: Mrad2831_4991

Alternate gene names: 170751372

Gene position: 5311458-5312945 (Clockwise)

Preceding gene: 170751371

Following gene: 170751373

Centisome position: 87.39

GC content: 77.15

Gene sequence:

>1488_bases
ATGACGGCGATCTGGTTCATCCTGGCGGCCATGACCGCGGCGGCCGTGCTCGGCCTGCTCTGGCCGATGTCGCGCCGCGC
CGCCGTGCCGACCGGTGAGGCGGGCGGGAGCGGGCTCGCCACCGAGACGGCGTTCTACGAGGATCAGATCGCCGAGATCG
AGCGCGACCTCGAGCGCGGCTTGATCGCCCCCGACGAGGCCGAGACCGCTAAGGCCGAGGCGGGCCGCCGCCTGCTCCGG
TCGAGCCGCGAGGCGCAGCGCGAGGCCGAGGATGCCGGCATCGCCGAGGCCGCGCGCCCGGCCGAGCCGCGCCTGCGCCG
CCGGCGCGCCGCCTCGGCCTTCGCGCTCTCCACCATCCCCCTCGTGGCGCTGATCGCCTACGGGCTCTACGGCTCGCCCG
AGGTGCCGGCACAGACCGAGGCCGACCGGCAGGCCGCCCGTGGCGGCGCGGACGAGCTGATGAAGGCGGTCAGCCAGATC
GAGGCGCGCCTCGCCCGGGACCCGAACGACGCCCGCGGCTGGGCGGTGCTCGCCCCGGTCTACATGCGCACCGGCCGCTT
CGACGACGCCGCCCGCGCCTACGCCAACATCGCGCGGATCAAGGGTGAGACCGCCGATCTGCTGGCCGACCAGGGCGAGG
CCCTCACGGCGGCGGGCAACGGCACGGTCTCGCCCGAGGCCAGGGCGCTGTTCGAGAAGGCGCAGGCCAAGGAGCCGAAC
GCGCCCAAGCCCCGATTCTACCTGGCCCGCGCGGCCGAGCAGGCCGGCGACACCGGCGAGGCGATCCGCCAGCTCACCGA
GCTCGAGGCGTCGAGCCCGCCGAGTGCCCCCTGGCTCGGGATCGTCAAGCAGAGCCTCGCCCGGCTCAAGGGCGAGCCGC
CGCCGCCCGCAGCTCCGCAGACCGCCCCGCAGATCCCCGCGGAGCAGCAGGCGGCGATCCGCGGCATGGTCGACGGGCTC
GACGCCCGGCTCAAGACCGGCGGCGGCACCCCCGACGAGTGGCTGCGGCTGGTCCGGTCCCGGGCGGTCCTCGGCGAGCG
CGAGCAGGCGGCCGACGCCCTGGCCCGGGCGCGCGCGGCCCTGGCGGGCGACCCGCAGGGGCTCGCCCAGGTCGAGCAGG
GCGCCCGCGCCGTGGGGCTCGGCGCGGAGGGCGAGGCGCCCGCGCCGGCCGGATCCGGCCAGCCGGGATCGGGCGCCCAA
TCCGAGAAGGAGGCCGCGATGGCGGCCGTGCGCGCCATGCCGCAGGCTGAGCAGCAGGCGGCGATTCGCGGGATGGTCGA
GGGGCTGGACCGGCGCCTCGCCGCGCGGGGCGGCACGCCGGACGAGTGGATGCGCCTCGTGCGCTCCTACAGCGCGCTGG
GCGAGCGGGACCAAGCGGTGAAGGCCCTCGACCGCGCCCGGATGGCGCTGGCCGCCAACAGCGAGGCGGTGACGCGGCTC
GACGGCCTCGCCCGGGAGCTGGACCTGCCCGCCAAGCCCAATCCCTGA

Upstream 100 bases:

>100_bases
TGACACCGTGCCGCCGCCGGGAGGCGTCGTGGCGTCACGCTGCCGGCTCCACATGGCGTGGGGAGGGGCGGGCCGGTCCG
GCTCGTTGGCGATAAGGTCC

Downstream 100 bases:

>100_bases
CAGGCCGGACCCCCCGCCAGGCCCAGCCCCGGCACCACGAGATCGTGAGGCCGCCTCCGCCGAGCGGTCCGTACGACAAT
CGGTCCCGACGCCCGCCCTT

Product: cytochrome c-type biogenesis protein CcmI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTAIWFILAAMTAAAVLGLLWPMSRRAAVPTGEAGGSGLATETAFYEDQIAEIERDLERGLIAPDEAETAKAEAGRRLLR
SSREAQREAEDAGIAEAARPAEPRLRRRRAASAFALSTIPLVALIAYGLYGSPEVPAQTEADRQAARGGADELMKAVSQI
EARLARDPNDARGWAVLAPVYMRTGRFDDAARAYANIARIKGETADLLADQGEALTAAGNGTVSPEARALFEKAQAKEPN
APKPRFYLARAAEQAGDTGEAIRQLTELEASSPPSAPWLGIVKQSLARLKGEPPPPAAPQTAPQIPAEQQAAIRGMVDGL
DARLKTGGGTPDEWLRLVRSRAVLGEREQAADALARARAALAGDPQGLAQVEQGARAVGLGAEGEAPAPAGSGQPGSGAQ
SEKEAAMAAVRAMPQAEQQAAIRGMVEGLDRRLAARGGTPDEWMRLVRSYSALGERDQAVKALDRARMALAANSEAVTRL
DGLARELDLPAKPNP

Sequences:

>Translated_495_residues
MTAIWFILAAMTAAAVLGLLWPMSRRAAVPTGEAGGSGLATETAFYEDQIAEIERDLERGLIAPDEAETAKAEAGRRLLR
SSREAQREAEDAGIAEAARPAEPRLRRRRAASAFALSTIPLVALIAYGLYGSPEVPAQTEADRQAARGGADELMKAVSQI
EARLARDPNDARGWAVLAPVYMRTGRFDDAARAYANIARIKGETADLLADQGEALTAAGNGTVSPEARALFEKAQAKEPN
APKPRFYLARAAEQAGDTGEAIRQLTELEASSPPSAPWLGIVKQSLARLKGEPPPPAAPQTAPQIPAEQQAAIRGMVDGL
DARLKTGGGTPDEWLRLVRSRAVLGEREQAADALARARAALAGDPQGLAQVEQGARAVGLGAEGEAPAPAGSGQPGSGAQ
SEKEAAMAAVRAMPQAEQQAAIRGMVEGLDRRLAARGGTPDEWMRLVRSYSALGERDQAVKALDRARMALAANSEAVTRL
DGLARELDLPAKPNP
>Mature_494_residues
TAIWFILAAMTAAAVLGLLWPMSRRAAVPTGEAGGSGLATETAFYEDQIAEIERDLERGLIAPDEAETAKAEAGRRLLRS
SREAQREAEDAGIAEAARPAEPRLRRRRAASAFALSTIPLVALIAYGLYGSPEVPAQTEADRQAARGGADELMKAVSQIE
ARLARDPNDARGWAVLAPVYMRTGRFDDAARAYANIARIKGETADLLADQGEALTAAGNGTVSPEARALFEKAQAKEPNA
PKPRFYLARAAEQAGDTGEAIRQLTELEASSPPSAPWLGIVKQSLARLKGEPPPPAAPQTAPQIPAEQQAAIRGMVDGLD
ARLKTGGGTPDEWLRLVRSRAVLGEREQAADALARARAALAGDPQGLAQVEQGARAVGLGAEGEAPAPAGSGQPGSGAQS
EKEAAMAAVRAMPQAEQQAAIRGMVEGLDRRLAARGGTPDEWMRLVRSYSALGERDQAVKALDRARMALAANSEAVTRLD
GLARELDLPAKPNP

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52076; Mature: 51945

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIWFILAAMTAAAVLGLLWPMSRRAAVPTGEAGGSGLATETAFYEDQIAEIERDLERG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LIAPDEAETAKAEAGRRLLRSSREAQREAEDAGIAEAARPAEPRLRRRRAASAFALSTIP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHH
LVALIAYGLYGSPEVPAQTEADRQAARGGADELMKAVSQIEARLARDPNDARGWAVLAPV
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YMRTGRFDDAARAYANIARIKGETADLLADQGEALTAAGNGTVSPEARALFEKAQAKEPN
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCC
APKPRFYLARAAEQAGDTGEAIRQLTELEASSPPSAPWLGIVKQSLARLKGEPPPPAAPQ
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
TAPQIPAEQQAAIRGMVDGLDARLKTGGGTPDEWLRLVRSRAVLGEREQAADALARARAA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAGDPQGLAQVEQGARAVGLGAEGEAPAPAGSGQPGSGAQSEKEAAMAAVRAMPQAEQQA
HCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
AIRGMVEGLDRRLAARGGTPDEWMRLVRSYSALGERDQAVKALDRARMALAANSEAVTRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
DGLARELDLPAKPNP
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
TAIWFILAAMTAAAVLGLLWPMSRRAAVPTGEAGGSGLATETAFYEDQIAEIERDLERG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LIAPDEAETAKAEAGRRLLRSSREAQREAEDAGIAEAARPAEPRLRRRRAASAFALSTIP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHH
LVALIAYGLYGSPEVPAQTEADRQAARGGADELMKAVSQIEARLARDPNDARGWAVLAPV
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
YMRTGRFDDAARAYANIARIKGETADLLADQGEALTAAGNGTVSPEARALFEKAQAKEPN
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCC
APKPRFYLARAAEQAGDTGEAIRQLTELEASSPPSAPWLGIVKQSLARLKGEPPPPAAPQ
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
TAPQIPAEQQAAIRGMVDGLDARLKTGGGTPDEWLRLVRSRAVLGEREQAADALARARAA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAGDPQGLAQVEQGARAVGLGAEGEAPAPAGSGQPGSGAQSEKEAAMAAVRAMPQAEQQA
HCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
AIRGMVEGLDRRLAARGGTPDEWMRLVRSYSALGERDQAVKALDRARMALAANSEAVTRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
DGLARELDLPAKPNP
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]