| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170751302
Identifier: 170751302
GI number: 170751302
Start: 5240054
End: 5242063
Strand: Direct
Name: 170751302
Synonym: Mrad2831_4919
Alternate gene names: NA
Gene position: 5240054-5242063 (Clockwise)
Preceding gene: 170751299
Following gene: 170751303
Centisome position: 86.22
GC content: 73.03
Gene sequence:
>2010_bases ATGGACGCCCGCAGCCCGACGATCACGCCGAAGACGCAGGACCGTCAGGCCGAGCTGACCCTGCGGGGGATCGCGCTCGG CGCGGCCATCACCGTCGTGTTCATGGCCGCCAACCTCTACATGGGCCTGAAGACCGGGATGACGTTCTCGTCCTCGATCC CGGCCGCGATGATCTCGATGGGCGCCTTCCGGCTTATGGGCGGCGCCGGCATCCTCGAGAACAACATCGTGCAGACCCAG GCCTCGGCGGCCGGCACCCTGTGCAACGTCATCCTGGCTCTCCCCGGCCTCGTCCTCGTCGGCCACTGGCACGGCTTCCC GTTCTGGCAGACCACGGCGGTCTGCCTGCTGGGCGGTCTGCTCGGCGTCGCCTTCTCGATCCCGCTCCGCCGCGCCCTCG TGTCGGGCAGCGATCTCCCCTATCCCGAGGGCATCGCCGCCGCGGAGGTTCTCAAGACCGGGCACGAGGAGCAGGGCGGC CGCGGCCTGCGCGACCTGCTCGGGGCCGCCGCGGCCGCCGGGACGATCGGGCTCGCCACCACGGGGCTGAAGGTCCTGGG CGAGGGCCTCAACGGCGCGGTCAGCCTCGGCGGCGCGGTGTTCCGCACCGGGACCGGCTTCTCGCTGGCGCTGGTCGGCG TCGGCTACCTCGTGGGCATCGGCGCCTGCCTCGCGCTGCTGACCGGCGTCCTGATCGCCTGGGGGATCGCGGTCCCGATC CTGACCGCCCTGTCGCCCGACCCCGGCAAGTCCGCGGGTGCGGCCGCCGAGGCGGTCTGGTCCGGGCAGGTGCGCCTCAT GGGCGCCGGCATCATCGCGGTGGGCGGGCTCTGGACCGTGGGCTCGCTGGCGCGCCCGATCTTCGGAAGCATCCGCGCCG CCCTGTCCGGGAGCGGCGGTCTCGGCAAGGATCATCCGCGCGAGGAGCGCGACCTGCCGATCACCTGGGTCGCCGCCGCG ACGCTGGCCCTGTGCGTGCCGCTCGCGATCCTGTTCGCGTACTTCGCCGCGCCGGCCGACCTCGGCGGCCTGATGATCGT GCTGGCGGTGGCCGCGACCCTGTTCACGGTGCTGTTCGGCTTCCTGATGGCGGCGGCCTGCGGCTACCTCGCGGGCCTGC TGGGCTCCTCGTCCAGCCCGATCTCGGGGATCGGCATCCTGACCACGATGGCGACCGCGCTGCTCCTGCCCCTGATCCTG GGGCATTCCGCGGGGCCCGAGGGGGACCGGTTCGTGACCGGCATGGCGCTGCTGCTGACGTCCGTGATCATCACCACCTC GTCGATCGCCAACGACAACCTGCAGGACCTGAAGACCGGGCAGGTGCTGGGCGCCACGCCCTGGCACCAGCAGGTCGCGC TCATCCTCGGCGTCGGGGTCGGCGCCGTGGTGATCGCCCCGCTCCTGTCGCTGCTCTACGAGGCCTACGGCTTCGTCGGC GCGCCCGCGCATGACGGGCAGGACGCGGGGAGCGCCATGCCGGCGCCCCAGGCGGCCCTGATGACCCAGATCGCCAACGG CATCACGCACGGCGAGCTGCCCTGGACCATGGTGCTGATCGGGGCCGGGCTCGGGGTGGTGCTGGTGGCGGCCGAGACCT GGCTGAAGCGGCGCGACCTCACCTTCCCGGCCCTGACGGTCGGGATCGGCATGTACCTGCCGCTGTCGGTGGAGATGACG ATCGCGATCGGCGGCGTCCTCGGCTGGATCGCCGAGCGCCGGCTGCGCGCCCGCGTCGGACCGAAGGGGGACGCGAAGGC CGACAAGGCAGTGGGGTACGCCCGCCGGCGGGGGGTGCTCCTCGCCTCCGGATTCCTCGTCGGCGAGAGCTGCATCGGCG TGCTGCTCGCCGGCACCGATCTCCTGGCTGGGCACAGTTCGGCGATCGCCGTCGCCGGCAAGGGCTTCGCGCCCTACGCC ACGGGGCTCGGCCTCGCCGTGTTCCTGGCGGGCCTCGCCGTCTACCTGCGGATGGTCTCGACGCCGGCCGCGGCCCAGCG GGGGGCGTGA
Upstream 100 bases:
>100_bases ACAGATCGCCCCAGGGACCGGGCGAGGCCGCCCGGCCGGCGACGGCGCGGGAACGTTTCCGGCCCCTCGCGTGCTGTGCC TTCCGCAGCCCGAGTGGATG
Downstream 100 bases:
>100_bases CGGATCCGCCGGGTTCCGGAGCGGGTTCCCCCAGGACGCCGTCGTCCGCGCGGGCGGAGCGAAGCCGCCCGGACGACACG ACGCTCACGGATGCCGCGTG
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA TGLGLAVFLAGLAVYLRMVSTPAAAQRGA
Sequences:
>Translated_669_residues MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA TGLGLAVFLAGLAVYLRMVSTPAAAQRGA >Mature_669_residues MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA TGLGLAVFLAGLAVYLRMVSTPAAAQRGA
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 67496; Mature: 67496
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISM CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GAFRLMGGAGILENNIVQTQASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGL HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH LGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGGRGLRDLLGAAAAAGTIGLAT HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH TGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI HHHHHHHCCCCCHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGG HHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC LGKDHPREERDLPITWVAAATLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLILGHSAGPEGDRFVTGMALLLT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG HHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC TFPALTVGIGMYLPLSVEMTIAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVL CCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEE LASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYATGLGLAVFLAGLAVYLRMVS EECCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC TPAAAQRGA CCCHHCCCC >Mature Secondary Structure MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISM CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GAFRLMGGAGILENNIVQTQASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGL HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH LGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGGRGLRDLLGAAAAAGTIGLAT HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH TGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI HHHHHHHCCCCCHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGG HHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC LGKDHPREERDLPITWVAAATLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLILGHSAGPEGDRFVTGMALLLT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG HHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC TFPALTVGIGMYLPLSVEMTIAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVL CCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEE LASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYATGLGLAVFLAGLAVYLRMVS EECCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC TPAAAQRGA CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]