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The map label for this gene is ydbM [H]

Identifier: 170751223

GI number: 170751223

Start: 5171208

End: 5172353

Strand: Direct

Name: ydbM [H]

Synonym: Mrad2831_4840

Alternate gene names: 170751223

Gene position: 5171208-5172353 (Clockwise)

Preceding gene: 170751219

Following gene: 170751224

Centisome position: 85.08

GC content: 78.27

Gene sequence:

>1146_bases
ATGACCGTCGCCGTCCCGCCCCCCGACATCGTCAGCAGCCTCGCCGGGCGGCTCGCCGCCCGCGCGGCCGACCACGACCG
CGCGGGGACCTTCCCGCACGACTCCCTCGCGGCGCTCCGGGAGGCCGGGCTCCTGGCTCTCACCGTGCCGCGGCGTCTCG
GCGGCGGCGGTGCGGGCCTCGCGCGGGCCGCCGCTCTGGTGCGGGCGCTCGGCGCCGCCGACCCGGCGACCGCCCTGGTC
GTGGCGATGCAGTATCTCCAGCACGGGCTGATCCACCGGCCGGATACCCCGTGGCCGCGCGCGCTCGCCGACGCGGTCGG
CGCGGCGGCGGTGGCGCGGGGGGCGCTGATCAACGCCCTGCGGGTCGAGTCCGAACTCGGCACGCCCGCGCGGGGCGGCC
TGCCGGCCACGGTCGCCCGCCGCGACGGCGCGGGCTGGCGGATCTCCGGGCACAAGATCTACGCGACCGGCGCGCCGGGG
CTCGCCTACGGCCTCGTCTTCGTCCGCACCGACGAGGCGGAGCCGCGCACCGGCAACGTCCTGGTGCCGTTCGACGCGCC
GGGCATCCGCATCGCGGAGACCTGGGACCATCTCGGCCTGCGCGCCTCCGGCAGCCACGACGTCCACTTCACGGACGTGC
CGATCCCCGGGGACCACGCCGTCGACCTGCGGCCGCCGGGCGGCTGGTCGGGGCCCGATCCCTGGCAGCAGGCCTGGAGC
TGCACCCTGCTCGCCGCCCTCTACGACGGCGTGGCCCGGGCGGCGCAGGACTGGTTCACCGGCTTCCTGCGGGCGCGCCG
GCCCGGCAGCCTCGGTGCGCCGCTGGCGAGCCTGCCGCGCTTCCACGAGGCGGTCGGCGAGAACGAGCGGCTGCTCGCCG
TCAACGCGCGCCTCGTCGCCGCGCTCGCCGCCGAGGTCGACGCGGGACATCCCCCGCCGCCGCGCGAGTCCGGATTCGTG
AAGCTCACGGCAACGGAGAACGCTGTCGCGGCGGTCCAGCGCGCCGCGGAGCTGTGCGGCAACGCCGCCCTGTCCCGGGC
GAACCCGCTGGAGCGGCACCTGCGCGACGTCCTGTGCGCGCGCATCCACTGGCCGCAAGGGGACGCCGTCCGCGCCGCCG
CCGGCAGGGCCGCCCTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GGAACGGCATTCCGTTGACGCGATCCGGGTCCGGGCGGACCATCGCGGCTCCCGGGATGGCGCCGCGCGGCCGCCCGCCG
ATCACGTCGCCGAACACCCC

Downstream 100 bases:

>100_bases
ACCCGCCCTCGACCCGGAGATCGCCCCATGAGCCTGCTTCCCCCCGACGCCGTCGAGTTCATCGGCTTCGTCGCCCCCCG
CCACACCTCCGAGATCCACC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTVAVPPPDIVSSLAGRLAARAADHDRAGTFPHDSLAALREAGLLALTVPRRLGGGGAGLARAAALVRALGAADPATALV
VAMQYLQHGLIHRPDTPWPRALADAVGAAAVARGALINALRVESELGTPARGGLPATVARRDGAGWRISGHKIYATGAPG
LAYGLVFVRTDEAEPRTGNVLVPFDAPGIRIAETWDHLGLRASGSHDVHFTDVPIPGDHAVDLRPPGGWSGPDPWQQAWS
CTLLAALYDGVARAAQDWFTGFLRARRPGSLGAPLASLPRFHEAVGENERLLAVNARLVAALAAEVDAGHPPPPRESGFV
KLTATENAVAAVQRAAELCGNAALSRANPLERHLRDVLCARIHWPQGDAVRAAAGRAALGA

Sequences:

>Translated_381_residues
MTVAVPPPDIVSSLAGRLAARAADHDRAGTFPHDSLAALREAGLLALTVPRRLGGGGAGLARAAALVRALGAADPATALV
VAMQYLQHGLIHRPDTPWPRALADAVGAAAVARGALINALRVESELGTPARGGLPATVARRDGAGWRISGHKIYATGAPG
LAYGLVFVRTDEAEPRTGNVLVPFDAPGIRIAETWDHLGLRASGSHDVHFTDVPIPGDHAVDLRPPGGWSGPDPWQQAWS
CTLLAALYDGVARAAQDWFTGFLRARRPGSLGAPLASLPRFHEAVGENERLLAVNARLVAALAAEVDAGHPPPPRESGFV
KLTATENAVAAVQRAAELCGNAALSRANPLERHLRDVLCARIHWPQGDAVRAAAGRAALGA
>Mature_380_residues
TVAVPPPDIVSSLAGRLAARAADHDRAGTFPHDSLAALREAGLLALTVPRRLGGGGAGLARAAALVRALGAADPATALVV
AMQYLQHGLIHRPDTPWPRALADAVGAAAVARGALINALRVESELGTPARGGLPATVARRDGAGWRISGHKIYATGAPGL
AYGLVFVRTDEAEPRTGNVLVPFDAPGIRIAETWDHLGLRASGSHDVHFTDVPIPGDHAVDLRPPGGWSGPDPWQQAWSC
TLLAALYDGVARAAQDWFTGFLRARRPGSLGAPLASLPRFHEAVGENERLLAVNARLVAALAAEVDAGHPPPPRESGFVK
LTATENAVAAVQRAAELCGNAALSRANPLERHLRDVLCARIHWPQGDAVRAAAGRAALGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=355, Percent_Identity=27.3239436619718, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=354, Percent_Identity=24.0112994350282, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=337, Percent_Identity=22.8486646884273, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=371, Percent_Identity=25.0673854447439, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=372, Percent_Identity=24.4623655913978, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646207, Length=369, Percent_Identity=23.8482384823848, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356377, Length=358, Percent_Identity=22.6256983240223, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39570; Mature: 39439

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAVPPPDIVSSLAGRLAARAADHDRAGTFPHDSLAALREAGLLALTVPRRLGGGGAGL
CEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCHHCCCCCHHH
ARAAALVRALGAADPATALVVAMQYLQHGLIHRPDTPWPRALADAVGAAAVARGALINAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVESELGTPARGGLPATVARRDGAGWRISGHKIYATGAPGLAYGLVFVRTDEAEPRTGNV
HHHHHCCCCCCCCCCCHHEECCCCCEEEECCEEEEECCCCHHEEEEEEECCCCCCCCCCE
LVPFDAPGIRIAETWDHLGLRASGSHDVHFTDVPIPGDHAVDLRPPGGWSGPDPWQQAWS
EEECCCCCCEEEEHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHH
CTLLAALYDGVARAAQDWFTGFLRARRPGSLGAPLASLPRFHEAVGENERLLAVNARLVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
ALAAEVDAGHPPPPRESGFVKLTATENAVAAVQRAAELCGNAALSRANPLERHLRDVLCA
HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RIHWPQGDAVRAAAGRAALGA
HHCCCCCCCHHHHCCCHHCCC
>Mature Secondary Structure 
TVAVPPPDIVSSLAGRLAARAADHDRAGTFPHDSLAALREAGLLALTVPRRLGGGGAGL
EECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEECCHHCCCCCHHH
ARAAALVRALGAADPATALVVAMQYLQHGLIHRPDTPWPRALADAVGAAAVARGALINAL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RVESELGTPARGGLPATVARRDGAGWRISGHKIYATGAPGLAYGLVFVRTDEAEPRTGNV
HHHHHCCCCCCCCCCCHHEECCCCCEEEECCEEEEECCCCHHEEEEEEECCCCCCCCCCE
LVPFDAPGIRIAETWDHLGLRASGSHDVHFTDVPIPGDHAVDLRPPGGWSGPDPWQQAWS
EEECCCCCCEEEEHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHH
CTLLAALYDGVARAAQDWFTGFLRARRPGSLGAPLASLPRFHEAVGENERLLAVNARLVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
ALAAEVDAGHPPPPRESGFVKLTATENAVAAVQRAAELCGNAALSRANPLERHLRDVLCA
HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RIHWPQGDAVRAAAGRAALGA
HHCCCCCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]