| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ssuD [H]
Identifier: 170751224
GI number: 170751224
Start: 5172381
End: 5173475
Strand: Direct
Name: ssuD [H]
Synonym: Mrad2831_4841
Alternate gene names: 170751224
Gene position: 5172381-5173475 (Clockwise)
Preceding gene: 170751223
Following gene: 170751225
Centisome position: 85.1
GC content: 75.98
Gene sequence:
>1095_bases ATGAGCCTGCTTCCCCCCGACGCCGTCGAGTTCATCGGCTTCGTCGCCCCCCGCCACACCTCCGAGATCCACCCGGCCGC GGGGCCGGCCATCGACCGCGACTACCTGAAGCTCCTGGCGCAGGCCCACGAATGGGGCGGGTTCGACCGGGTGCTGGTGG CCTTCCACGCGACCACGCCGGACGCGCTCCTGCTCGCAGGACAGGTCGCCGCCGTGACCGAGCGGCTGGGGCTGATGATC GCCCACCGCACCGGATTCACGGCACCGACCGTGGCGGCGCGGCAGTTCGCGACCCTCGACCAGCTCACCGGCGGCCGGGT CGCGATCCACGTGATCAGCGGCGGCGACGACCGGGAACTCGCCCAGGACGGCGACCACCTCACCAAGGACGCGCGCTACG CCCGCACCCGGGAGTTCCTCGACATCGTCCGGCAGAGCTGGACCGCCGCGGAGCCGTTCGACTACGCGGGCGATCACTAC CGGGTGGAGCGCGGCTTCTCCGAGGTGAAGCCGGTCAACGCGATCCCGGTCTATTTCGGCGGCGCCTCGCCGGCGGCGCT GGCGGTGGCCGGCCGCCACGCCGACACCTACGCCCTCTGGGGCGAGACGCACGCGCAGGTCGCCGAGCTGATCGGCCGGG TGCGGGCGGCGGCCGCGCCCCACGGGCGGGCGCCGCGCTTCAGCCTGTCGGTCCGGCCGATCCTGGCCGAGACGGAGGCG CGCGCCTGGGAGCGCGCCGAGGACATCCTGGCCCGGACGCGGGCGGTCCGGGCCGCCAGGGGGCTCGGCCCGGCCGCGAC GCCGCAGAACGAGGGCTCCCGGCGGCTCCTCGCGGCCGCCGCCGCGGGGCCGCGCCACGACAAGCGCCTGTTCACCGCCA TCGCGGCCGAGACCGGGGCGGCGGGCAACTCGACCGCCCTGGTCGGCACCCCCGAGCAGGTCGCCGACGCCCTGCTCGAC TATCACGACCTGGGCGTGCGGACCTTCCTGATCCGCGGCTTCGACCCGCTGGAGGACGCGCTCCAGTACGGCCGGGCGCT GCTGCCCGCCTTCCGGGACGCCCTCGGGCGCCGCGGCGCCGCCGAGGCCGCCTGA
Upstream 100 bases:
>100_bases GTGCGCGCGCATCCACTGGCCGCAAGGGGACGCCGTCCGCGCCGCCGCCGGCAGGGCCGCCCTCGGCGCCTGAACCCGCC CTCGACCCGGAGATCGCCCC
Downstream 100 bases:
>100_bases TGCGCGCCGTCATCCTCGCCCTGCTGGCGATCCTGGCGGTCCGGCCGGCGCAGGCCCAGGACGTGCTCCGGGTCGGCGAC CAGCGCGGCAATGCCCGCGC
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSLLPPDAVEFIGFVAPRHTSEIHPAAGPAIDRDYLKLLAQAHEWGGFDRVLVAFHATTPDALLLAGQVAAVTERLGLMI AHRTGFTAPTVAARQFATLDQLTGGRVAIHVISGGDDRELAQDGDHLTKDARYARTREFLDIVRQSWTAAEPFDYAGDHY RVERGFSEVKPVNAIPVYFGGASPAALAVAGRHADTYALWGETHAQVAELIGRVRAAAAPHGRAPRFSLSVRPILAETEA RAWERAEDILARTRAVRAARGLGPAATPQNEGSRRLLAAAAAGPRHDKRLFTAIAAETGAAGNSTALVGTPEQVADALLD YHDLGVRTFLIRGFDPLEDALQYGRALLPAFRDALGRRGAAEAA
Sequences:
>Translated_364_residues MSLLPPDAVEFIGFVAPRHTSEIHPAAGPAIDRDYLKLLAQAHEWGGFDRVLVAFHATTPDALLLAGQVAAVTERLGLMI AHRTGFTAPTVAARQFATLDQLTGGRVAIHVISGGDDRELAQDGDHLTKDARYARTREFLDIVRQSWTAAEPFDYAGDHY RVERGFSEVKPVNAIPVYFGGASPAALAVAGRHADTYALWGETHAQVAELIGRVRAAAAPHGRAPRFSLSVRPILAETEA RAWERAEDILARTRAVRAARGLGPAATPQNEGSRRLLAAAAAGPRHDKRLFTAIAAETGAAGNSTALVGTPEQVADALLD YHDLGVRTFLIRGFDPLEDALQYGRALLPAFRDALGRRGAAEAA >Mature_363_residues SLLPPDAVEFIGFVAPRHTSEIHPAAGPAIDRDYLKLLAQAHEWGGFDRVLVAFHATTPDALLLAGQVAAVTERLGLMIA HRTGFTAPTVAARQFATLDQLTGGRVAIHVISGGDDRELAQDGDHLTKDARYARTREFLDIVRQSWTAAEPFDYAGDHYR VERGFSEVKPVNAIPVYFGGASPAALAVAGRHADTYALWGETHAQVAELIGRVRAAAAPHGRAPRFSLSVRPILAETEAR AWERAEDILARTRAVRAARGLGPAATPQNEGSRRLLAAAAAGPRHDKRLFTAIAAETGAAGNSTALVGTPEQVADALLDY HDLGVRTFLIRGFDPLEDALQYGRALLPAFRDALGRRGAAEAA
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=332, Percent_Identity=36.144578313253, Blast_Score=168, Evalue=5e-43, Organism=Escherichia coli, GI1787247, Length=168, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 38945; Mature: 38814
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLPPDAVEFIGFVAPRHTSEIHPAAGPAIDRDYLKLLAQAHEWGGFDRVLVAFHATTP CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC DALLLAGQVAAVTERLGLMIAHRTGFTAPTVAARQFATLDQLTGGRVAIHVISGGDDREL CHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH AQDGDHLTKDARYARTREFLDIVRQSWTAAEPFDYAGDHYRVERGFSEVKPVNAIPVYFG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCHHHCCCCCCEEEEEC GASPAALAVAGRHADTYALWGETHAQVAELIGRVRAAAAPHGRAPRFSLSVRPILAETEA CCCCHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHH RAWERAEDILARTRAVRAARGLGPAATPQNEGSRRLLAAAAAGPRHDKRLFTAIAAETGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEHHCCCCCHHHHHHHHHHHHCCC AGNSTALVGTPEQVADALLDYHDLGVRTFLIRGFDPLEDALQYGRALLPAFRDALGRRGA CCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC AEAA CCCC >Mature Secondary Structure SLLPPDAVEFIGFVAPRHTSEIHPAAGPAIDRDYLKLLAQAHEWGGFDRVLVAFHATTP CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC DALLLAGQVAAVTERLGLMIAHRTGFTAPTVAARQFATLDQLTGGRVAIHVISGGDDREL CHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH AQDGDHLTKDARYARTREFLDIVRQSWTAAEPFDYAGDHYRVERGFSEVKPVNAIPVYFG HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHCCHHHCCCCCCEEEEEC GASPAALAVAGRHADTYALWGETHAQVAELIGRVRAAAAPHGRAPRFSLSVRPILAETEA CCCCHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHH RAWERAEDILARTRAVRAARGLGPAATPQNEGSRRLLAAAAAGPRHDKRLFTAIAAETGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEHHCCCCCHHHHHHHHHHHHCCC AGNSTALVGTPEQVADALLDYHDLGVRTFLIRGFDPLEDALQYGRALLPAFRDALGRRGA CCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC AEAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA