| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is trg [C]
Identifier: 170751197
GI number: 170751197
Start: 5139879
End: 5141162
Strand: Direct
Name: trg [C]
Synonym: Mrad2831_4814
Alternate gene names: 170751197
Gene position: 5139879-5141162 (Clockwise)
Preceding gene: 170751189
Following gene: 170751198
Centisome position: 84.57
GC content: 73.83
Gene sequence:
>1284_bases ATGTCCTTCCAAGCCGCCCACGACATTCTCAGGCAGGTCCCGGGCCGGTTTCGCCGGCCCCAGATGCGTTCCGAGCTGCG GCCCGATGGCCGGGGCGATGGCCGGGTCGAAGACCGGCCCGGATCGGGCGCGGCGCCCGGCGCCGCGATCCCGCCGGCCC CGCCCGCGGAGGCGGCCGCGTCATCCATCGAGTCCGAGCCCGTGCCGCCGCACGTCGCGATGCCGGCCGAGCCGGCGCCC GCCGCGGGGGCGGCCGACCTGCTCCAGGCCTGGCTCGGCCTCTCGGCGCAGCAGCGGGCGCTGCTCGACGCCCTCGTCGC CGAACTCGGGATCGTCTCCACCGACGTGGAGGCCAACGTCCACGGCCTGTCCAACCGCTTCCAGAACATCGCCGCCTCGA CCTGCGAGCAGTCGGAGATCGTCCGGGGGCTCGTCGCCTCGGTTCAGACCGTCCAGATCGACGACAAGACCCTGCAGCTC GGCGACGTCGCCGCCGGCCTCGGCGAGACGCTCACCGCGCTGATCGAGCGGATCACCCTGATGTCGTCCCGCGGCTCGAC CCTCGCCCAGGGGCTCACGGGGGTGCTCGAGGGCCTGACGTCGGTCGAGGGCAGCGTCGCGCAGATCGAGCGGATCAACC GCCAGACCAACCTCCTCGCCCTGAACGCCAAGATCGAGGCGGCCCGGGCCGGCGCCAGCGGCGCGGCCTTCGCGGTGGTC GCCGACGAGGTGCGCGGCCTCGCCACGACCATCAACGCCCTGTCGGACGTGATCAAGCAGCAGATCGGCACCATGGCGGC CGGCCTGCGCAGCAGCCACGCCCTGCTGGGCGACATCGCGGCGATCGACATGTCCGAGGAGAGCCGGACCGCCGAGACGC GCGTCCGCATGGTGATGCGGGCGCTGGTCGAGCAGAACGCGCAGGTCGCGGGCATCCTGCAGCAGACCGCCGAGACCACG CAGGCCATCACGCAGGATGTGTCGGCGGCGATCGTGGCGATGCAGTTCCAGGACCGGGCCAAGCAGCGCATCCAGAACGT CGAGGGCCTGCTGCGCTCGGCCGGAGCGGAACTCGGCCGGCTCTCCGCCGACAGCGCGGACCGCGTCGCGGCGCCGGGTG CGGCGGCCGACCCGGCCTGGATCGAGGCGGCGATCGGGAGCTGCACGCTGGGTGAGGTTCGGGCGCGCCTGACGGAGCGC CTGCTCGGCGGTGCCCCGGCCACCGCGAAGCCGGCCGCCGACGCTGCGGCCGCCGACGATCTGGACGGCATCGACCTGTT CTAG
Upstream 100 bases:
>100_bases CGCTTTCTTTAACGGCGATCCTTAGCCTCGGGCGGGCACCGACCGTCGGATTGCCGCTTGACCCGCGCGCATCGGTCGAC GCCGAGAGATCCGCCCGCCG
Downstream 100 bases:
>100_bases GCGCCGGCGCGCCGCGCAGCCGCGGTCCGGGCGCGGCCCGCTCCGGCCCGGCCGGCGGTCGCATCGCGGCCGGGCCTGCC CGCGCCGGTTAGGCCGCGAC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSFQAAHDILRQVPGRFRRPQMRSELRPDGRGDGRVEDRPGSGAAPGAAIPPAPPAEAAASSIESEPVPPHVAMPAEPAP AAGAADLLQAWLGLSAQQRALLDALVAELGIVSTDVEANVHGLSNRFQNIAASTCEQSEIVRGLVASVQTVQIDDKTLQL GDVAAGLGETLTALIERITLMSSRGSTLAQGLTGVLEGLTSVEGSVAQIERINRQTNLLALNAKIEAARAGASGAAFAVV ADEVRGLATTINALSDVIKQQIGTMAAGLRSSHALLGDIAAIDMSEESRTAETRVRMVMRALVEQNAQVAGILQQTAETT QAITQDVSAAIVAMQFQDRAKQRIQNVEGLLRSAGAELGRLSADSADRVAAPGAAADPAWIEAAIGSCTLGEVRARLTER LLGGAPATAKPAADAAAADDLDGIDLF
Sequences:
>Translated_427_residues MSFQAAHDILRQVPGRFRRPQMRSELRPDGRGDGRVEDRPGSGAAPGAAIPPAPPAEAAASSIESEPVPPHVAMPAEPAP AAGAADLLQAWLGLSAQQRALLDALVAELGIVSTDVEANVHGLSNRFQNIAASTCEQSEIVRGLVASVQTVQIDDKTLQL GDVAAGLGETLTALIERITLMSSRGSTLAQGLTGVLEGLTSVEGSVAQIERINRQTNLLALNAKIEAARAGASGAAFAVV ADEVRGLATTINALSDVIKQQIGTMAAGLRSSHALLGDIAAIDMSEESRTAETRVRMVMRALVEQNAQVAGILQQTAETT QAITQDVSAAIVAMQFQDRAKQRIQNVEGLLRSAGAELGRLSADSADRVAAPGAAADPAWIEAAIGSCTLGEVRARLTER LLGGAPATAKPAADAAAADDLDGIDLF >Mature_426_residues SFQAAHDILRQVPGRFRRPQMRSELRPDGRGDGRVEDRPGSGAAPGAAIPPAPPAEAAASSIESEPVPPHVAMPAEPAPA AGAADLLQAWLGLSAQQRALLDALVAELGIVSTDVEANVHGLSNRFQNIAASTCEQSEIVRGLVASVQTVQIDDKTLQLG DVAAGLGETLTALIERITLMSSRGSTLAQGLTGVLEGLTSVEGSVAQIERINRQTNLLALNAKIEAARAGASGAAFAVVA DEVRGLATTINALSDVIKQQIGTMAAGLRSSHALLGDIAAIDMSEESRTAETRVRMVMRALVEQNAQVAGILQQTAETTQ AITQDVSAAIVAMQFQDRAKQRIQNVEGLLRSAGAELGRLSADSADRVAAPGAAADPAWIEAAIGSCTLGEVRARLTERL LGGAPATAKPAADAAAADDLDGIDLF
Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44062; Mature: 43931
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQAAHDILRQVPGRFRRPQMRSELRPDGRGDGRVEDRPGSGAAPGAAIPPAPPAEAAA CCHHHHHHHHHHCCHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SSIESEPVPPHVAMPAEPAPAAGAADLLQAWLGLSAQQRALLDALVAELGIVSTDVEANV HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHH HGLSNRFQNIAASTCEQSEIVRGLVASVQTVQIDDKTLQLGDVAAGLGETLTALIERITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH MSSRGSTLAQGLTGVLEGLTSVEGSVAQIERINRQTNLLALNAKIEAARAGASGAAFAVV HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCHHHHHCCCCCCCHHHH ADEVRGLATTINALSDVIKQQIGTMAAGLRSSHALLGDIAAIDMSEESRTAETRVRMVMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALVEQNAQVAGILQQTAETTQAITQDVSAAIVAMQFQDRAKQRIQNVEGLLRSAGAELGR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSADSADRVAAPGAAADPAWIEAAIGSCTLGEVRARLTERLLGGAPATAKPAADAAAADD CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC LDGIDLF CCCCCCC >Mature Secondary Structure SFQAAHDILRQVPGRFRRPQMRSELRPDGRGDGRVEDRPGSGAAPGAAIPPAPPAEAAA CHHHHHHHHHHCCHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SSIESEPVPPHVAMPAEPAPAAGAADLLQAWLGLSAQQRALLDALVAELGIVSTDVEANV HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHH HGLSNRFQNIAASTCEQSEIVRGLVASVQTVQIDDKTLQLGDVAAGLGETLTALIERITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH MSSRGSTLAQGLTGVLEGLTSVEGSVAQIERINRQTNLLALNAKIEAARAGASGAAFAVV HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCHHHHHCCCCCCCHHHH ADEVRGLATTINALSDVIKQQIGTMAAGLRSSHALLGDIAAIDMSEESRTAETRVRMVMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALVEQNAQVAGILQQTAETTQAITQDVSAAIVAMQFQDRAKQRIQNVEGLLRSAGAELGR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSADSADRVAAPGAAADPAWIEAAIGSCTLGEVRARLTERLLGGAPATAKPAADAAAADD CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC LDGIDLF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA