| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170751189
Identifier: 170751189
GI number: 170751189
Start: 5132488
End: 5133603
Strand: Direct
Name: 170751189
Synonym: Mrad2831_4806
Alternate gene names: NA
Gene position: 5132488-5133603 (Clockwise)
Preceding gene: 170751188
Following gene: 170751197
Centisome position: 84.45
GC content: 68.64
Gene sequence:
>1116_bases ATGCTCCGGTCGGTGTCCCGGGTGAGCCCGCTCTCGGCTGCGGGGCTGCTGATCCTGGCCTGCGGGACCGGGCTGGCCGG TCCGGCCCGCGCCGAGCCCGAGCCGGCCCCGGCCACCGCCTCAGCCGCGGCGCCGACGCCGGCCGCGGCCCGCACGAGGC GCCAGGAGGCCGGCGTTCCCGTCGCGGCCGCCACCGTGATGGCGGCGCCGCCGCCGTCCGTCTTCGCCTTCTCCGACACT GTGGTGAGCTACCGCTTCCAGGGGCCCTCCGCGGAGCCCGGCCTCCGGGTCCAGCGTCCCGACGGCCAGTTCGTGGGGCG CGAGGTCCCCAAGAACGTGATCAACCTGTTCCACGCCAATTCGTGGGCCTACGGGACGAACCTGCTCTCCCTCGACATCC TCCGGTCCGGATCCCAGGACCCGGCGGGCAATCGGGTCGGCAGGTTCGAGGGCGTCGGCGCCACCGAGTTCTACCTGATC TACCGGGGCGTCCTGAGCCTCAACCAGGTCTTCGACACGCAGGCCCTCGCCGTTCCCGGTATCGTCAAGGATATCGGCCT GTCGTTCGGGGCCGACGTCAACACCAAGGACACGATCTTCGATTCCGAGAAGCGCGCCGGCACCTTTGGGTTGAGCTTCG CCTTCGACGTGCCGGCCGGGTTCGTGAACCTGAAGGTCCAGGGCTACAAGGAATTCTCCCGCAACGGCTTGGCGGGGAAC GGTCCCGTACCGGGCAATTCCGGGCGCGATGCCGTACCGGGCTTCGACTACGCGCACTTCCGCAGCGTCGAGTTCAAGAT GACGCCGGAATTCGAGATCACCTACACGATCCCGCTGCCGTTCACCGGGCTGCCGCTGTCGCTGGCCGGCTTCAACACCA TCGTCCTGCCCAAGGGCCGCTACGGCACGATCAACCAGTACGACACGCAGCTGGAATTCGTCTCGCAGACCAACCTCGTG CTCGATGTCGGGCAGCTGCTCGCCGAGACGCCCAACCGGGTCGAGGTCTTCGCCGGCTTCCAGTACTGGCACAACAAGTT CGGCGGCGACCCGCGGCGCACCCTCAACACCGAGGAGAAGGCGCTGATCGCCGGGGTGGCCTACCACCTGAAATGA
Upstream 100 bases:
>100_bases TGATCCTCGTGTTCTGGAAGCTGTTGTGACCGGCGTCGCGCCGGGGCGGTCGCGGTCCGCGGGGCGCCGTTCAGAGGACG GGCCAGGGGAGGGGCGCGCG
Downstream 100 bases:
>100_bases GACGGCCGGTCGCGGCGCGGGCCGTTCCGCGCGGCTTCAGCAATCCAAGGTCGTGTCCCGCTCCCACTGGGTGAGGTGCT GGCAGTAGGCGTTCCACTCC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MLRSVSRVSPLSAAGLLILACGTGLAGPARAEPEPAPATASAAAPTPAAARTRRQEAGVPVAAATVMAAPPPSVFAFSDT VVSYRFQGPSAEPGLRVQRPDGQFVGREVPKNVINLFHANSWAYGTNLLSLDILRSGSQDPAGNRVGRFEGVGATEFYLI YRGVLSLNQVFDTQALAVPGIVKDIGLSFGADVNTKDTIFDSEKRAGTFGLSFAFDVPAGFVNLKVQGYKEFSRNGLAGN GPVPGNSGRDAVPGFDYAHFRSVEFKMTPEFEITYTIPLPFTGLPLSLAGFNTIVLPKGRYGTINQYDTQLEFVSQTNLV LDVGQLLAETPNRVEVFAGFQYWHNKFGGDPRRTLNTEEKALIAGVAYHLK
Sequences:
>Translated_371_residues MLRSVSRVSPLSAAGLLILACGTGLAGPARAEPEPAPATASAAAPTPAAARTRRQEAGVPVAAATVMAAPPPSVFAFSDT VVSYRFQGPSAEPGLRVQRPDGQFVGREVPKNVINLFHANSWAYGTNLLSLDILRSGSQDPAGNRVGRFEGVGATEFYLI YRGVLSLNQVFDTQALAVPGIVKDIGLSFGADVNTKDTIFDSEKRAGTFGLSFAFDVPAGFVNLKVQGYKEFSRNGLAGN GPVPGNSGRDAVPGFDYAHFRSVEFKMTPEFEITYTIPLPFTGLPLSLAGFNTIVLPKGRYGTINQYDTQLEFVSQTNLV LDVGQLLAETPNRVEVFAGFQYWHNKFGGDPRRTLNTEEKALIAGVAYHLK >Mature_371_residues MLRSVSRVSPLSAAGLLILACGTGLAGPARAEPEPAPATASAAAPTPAAARTRRQEAGVPVAAATVMAAPPPSVFAFSDT VVSYRFQGPSAEPGLRVQRPDGQFVGREVPKNVINLFHANSWAYGTNLLSLDILRSGSQDPAGNRVGRFEGVGATEFYLI YRGVLSLNQVFDTQALAVPGIVKDIGLSFGADVNTKDTIFDSEKRAGTFGLSFAFDVPAGFVNLKVQGYKEFSRNGLAGN GPVPGNSGRDAVPGFDYAHFRSVEFKMTPEFEITYTIPLPFTGLPLSLAGFNTIVLPKGRYGTINQYDTQLEFVSQTNLV LDVGQLLAETPNRVEVFAGFQYWHNKFGGDPRRTLNTEEKALIAGVAYHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39661; Mature: 39661
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSVSRVSPLSAAGLLILACGTGLAGPARAEPEPAPATASAAAPTPAAARTRRQEAGVP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC VAAATVMAAPPPSVFAFSDTVVSYRFQGPSAEPGLRVQRPDGQFVGREVPKNVINLFHAN EEHEEEEECCCCCEEEECCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC SWAYGTNLLSLDILRSGSQDPAGNRVGRFEGVGATEFYLIYRGVLSLNQVFDTQALAVPG CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCC IVKDIGLSFGADVNTKDTIFDSEKRAGTFGLSFAFDVPAGFVNLKVQGYKEFSRNGLAGN HHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCC GPVPGNSGRDAVPGFDYAHFRSVEFKMTPEFEITYTIPLPFTGLPLSLAGFNTIVLPKGR CCCCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEECCCCCCCCEEECCCCEEEECCCC YGTINQYDTQLEFVSQTNLVLDVGQLLAETPNRVEVFAGFQYWHNKFGGDPRRTLNTEEK CCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCHHHCCCCCHH ALIAGVAYHLK HEEEEEEEECC >Mature Secondary Structure MLRSVSRVSPLSAAGLLILACGTGLAGPARAEPEPAPATASAAAPTPAAARTRRQEAGVP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC VAAATVMAAPPPSVFAFSDTVVSYRFQGPSAEPGLRVQRPDGQFVGREVPKNVINLFHAN EEHEEEEECCCCCEEEECCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCC SWAYGTNLLSLDILRSGSQDPAGNRVGRFEGVGATEFYLIYRGVLSLNQVFDTQALAVPG CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCC IVKDIGLSFGADVNTKDTIFDSEKRAGTFGLSFAFDVPAGFVNLKVQGYKEFSRNGLAGN HHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCC GPVPGNSGRDAVPGFDYAHFRSVEFKMTPEFEITYTIPLPFTGLPLSLAGFNTIVLPKGR CCCCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEECCCCCCCCEEECCCCEEEECCCC YGTINQYDTQLEFVSQTNLVLDVGQLLAETPNRVEVFAGFQYWHNKFGGDPRRTLNTEEK CCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCHHHCCCCCHH ALIAGVAYHLK HEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA