| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750955
Identifier: 170750955
GI number: 170750955
Start: 4860912
End: 4861826
Strand: Reverse
Name: 170750955
Synonym: Mrad2831_4566
Alternate gene names: NA
Gene position: 4861826-4860912 (Counterclockwise)
Preceding gene: 170750956
Following gene: 170750954
Centisome position: 79.99
GC content: 73.55
Gene sequence:
>915_bases ATGGACACCGCCCCTGACGATCCCCGCCGGCCCGAGAACCGCCTCGCCTACCGCGCCGCCGTGGACCGGCCGCGCCTGAC GCTGCCCGGGGGCCGGCACGTCGCCGTCTGGCCGGTGGTCAACGTCGAGCACTGGCTGATCGACCACCCGATGCCGCGCC AGATCCTGGCGCCGCCGACCGGGGCCAGCCTGCTGCCGGACATCCCGAACTGGGCGTGGCACGAGTACGGCATGCGGGTC GGCTTCTGGCGGTTCCTCGAGGCGTTCGAGAGCCGGGGCATCCGCCCGACCCTGTCGATCAACGGCTCGGTCTGCACGGC CTATCCGCGCATCGCCGAGGCCGCCCACGCGGCCGGCTGGGAGTTCATGGCCCACGGCTTCCACCAGGTCCCGACCCACA GGGTCGCGGACCAGCCGGAGATGATCGCCCGCACCGTCGCAGCGATCACCGGAACCACGGGGCGCCCGCCGCGCGGCTGG CTGGGGCCGGGCCTCACCGAGACCCTCGACACGCCCGACCACCTGCGCGCGGCCGGGCTCGAGTACGTCGGCGACTTCGT GGTCGACGATCGCCCCTGCCGGGTGGCGACGCGCACGGGCGACCTCGTCGCCCTCCCCTACTCGGTCGAGCTCAACGACA TCCCGCTGCTGGCCATCCAGCACCACCGGGCCGACGAGTTCGTGGAGCGGGCGCTCGCCCATCTCGACCGGCTCGCCGCC GAGGCTGCCGGCTCCGGCCCCCTCGGCGGCGCCAAGGTGATGGGCTTCGCGATCCACCCCTACATCACCGGCGTCCCGCA CCGGATCCACCTGCTGGAGCGGCTGCTCGACGCCATCCTGGCCCGCGACGACGCGGTGTTCATGCAGGGGGTCGAGATCC TCGACTGGTACCGCGCCACCGGCGACGCATCCTGA
Upstream 100 bases:
>100_bases TGCCGCGGCGGCGCGACGTGTCGAGCCCGGCCTTCAACGACCTGCGCCGGATGCTCGCGGCCCAGCTCCACAGCCACCAC GCCCCGCGGGCCGCTGCCTG
Downstream 100 bases:
>100_bases GCCGTCCGGGCGCATCGGGCCGCGGGGGAGGACGACCGTGCGATCCACCGCTGCACCTCGAGATGCGGGCGCGGGCAGGG CCTAGCCCCCCGCGCGCCGA
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Chitin Deacetylase; Deacetylase Protein; Polysaccharide Deacetylase Family
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS
Sequences:
>Translated_304_residues MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS >Mature_304_residues MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33564; Mature: 33564
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPT CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEECCHHHCCCCCCCHHHCCCCC GASLLPDIPNWAWHEYGMRVGFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGW CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCH EFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGWLGPGLTETLDTPDHLRAAGL HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH EYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA HHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRAT HHCCCCCCCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GDAS CCCC >Mature Secondary Structure MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPT CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEECCHHHCCCCCCCHHHCCCCC GASLLPDIPNWAWHEYGMRVGFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGW CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCH EFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGWLGPGLTETLDTPDHLRAAGL HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH EYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA HHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRAT HHCCCCCCCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GDAS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA