| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ygiB [C]
Identifier: 170750668
GI number: 170750668
Start: 4530356
End: 4531096
Strand: Reverse
Name: ygiB [C]
Synonym: Mrad2831_4278
Alternate gene names: 170750668
Gene position: 4531096-4530356 (Counterclockwise)
Preceding gene: 170750669
Following gene: 170750667
Centisome position: 74.55
GC content: 79.76
Gene sequence:
>741_bases GTGACGGAGACCGCGCCAGCTCCCGACGCGGCCCCCGATGCTGCCGGCCGCGCCGCCGGCGGGTCCGCGACCGGCTTCGC CGCCGCCCGCCGCTCCAAGCGCTCGGCCGCCGTGTCTCTGGTCCTGGTCGCGGGCGCCGGCGCGGCCGCCCTGACGCTCG GCGGCCTCGACCCGTCCCAGCGGGAGGAGGAGGCGCTCGTCTACGGGACGCTCGGCGCCTGCATCGCCCAGCAGCTGCGC GGCGCCGAGGCCTGCAGCGCCGCCTACACGAGCGCGCAGGAGACCTACGCGGCGACGGCGCCGCGCTACGAGACCGAGGC CGATTGCCAGCGCCACCACGGGACCGGCGGCTGCACGCCGGGCGCGCAGGTCACGGAGGCCGCGCGCGGCCGCTACCTGC CGGTGATGGCCGCCTTCATGATGGGGCGGACGGACGCGCAGGACCTGCCGGTCCAGCCGCTCTACCCGCACGCGCCCGAG GAGGAGCGCGACGAGGCCGGGACCGCGACGGCCGGGCACGGGGGCGGCTACTGCACCGGTGCGGGCGGCCGGGTCGCCTA CGCGGGCGGCGCCTCGCGGGTCCACGTCCCCGCCTCGGTCGCCCGCACCGCGAGCACGACGAGCACGACGACGAGCACGA CCCCGCGCACGGTCAGCCGCGGCGGCTTCGGCGGCACCGGGCGGGCGACGGCGTTCTCCGGAGGCTCGGGCGGCCGCGCG GGCGGGTTCGGCGGCGGCTGA
Upstream 100 bases:
>100_bases CGCATCGAGGAGGACCGCGCCGCCGCCGCGATCCTCCTCGGCGCGGCCTCGCTGGCGGGGGGCGTCGTGAACGCCGCCTC GATGACCTATTGAGGGGCCG
Downstream 100 bases:
>100_bases TGCGCCGCGTGCCGATCCCGGAGCGGCCCGACTGGCGGCTCCACGCCGCGCGCGCCGGCTTCACCTTCCACACGTTCGAC GGCGCCCCCTACTGGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLR GAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPE EERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA GGFGGG
Sequences:
>Translated_246_residues MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLR GAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPE EERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA GGFGGG >Mature_245_residues TETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLRG AEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEE ERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRAG GFGGG
Specific function: Unknown
COG id: COG5463
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24201; Mature: 24069
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHEEEECCCCCCC REEEALVYGTLGACIAQQLRGAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTP CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC GAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEEERDEAGTATAGHGGGYCTG CHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEC AGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA CCCEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC GGFGGG CCCCCC >Mature Secondary Structure TETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHEEEECCCCCCC REEEALVYGTLGACIAQQLRGAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTP CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC GAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEEERDEAGTATAGHGGGYCTG CHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEC AGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA CCCEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC GGFGGG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA