| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750625
Identifier: 170750625
GI number: 170750625
Start: 4488432
End: 4489922
Strand: Reverse
Name: 170750625
Synonym: Mrad2831_4235
Alternate gene names: NA
Gene position: 4489922-4488432 (Counterclockwise)
Preceding gene: 170750626
Following gene: 170750624
Centisome position: 73.87
GC content: 71.03
Gene sequence:
>1491_bases ATGAGCGAGGCCTGCATCTTCTCGGCCGGCTGCAGCGAACTCGCCGACCTCGTCCGGACCTACGACTGGGCGGAGACGCC GCTCGGTCCCATCGCCGGCTGGCCGCGGAGCCTGGTCTTCGCGGTCAGCACGCTGCTGCAATCGCCGGTGCCGATCGTGC TGCTCTGGGGCGAGGACGGCATCATGATCTACAACGATGCCTATTCGAGCTTCGCGGGCGGGCGCCATCCCGCGCTCCTC GGCTCCAAGGTGCGCGAGGGCTGGCCGGAGGTCGCCGACTTCAACGACAACGTCATGCGCGTCGGCCTGGCCGGCGGGAC GCTGTCGTACAAGGACCAGGAACTCACCCTGCACCGCTACGGCCGGCCCGAGCGGGTCTGGATGAATCTCGACTATTCGC CGGTCTTCGGCGAGGACGGGCGCCCCGCCGGCGTCATCGCCATCGTGGTCGAGAGCACCGAGCGCGTGCTGGCCGAGCGC CGCCTGCGCGCGAGCGAGGAGCTGTTCCGCACCCTCGCCCAGGGCATTCCGCAACTCGTCTGGCGCGCCGCGATCGACGG AGCCTGCATCTGGTCGAGCCCGCAATGGCAGGCCTATACCGGGCAGACCGACGCGACGAGCCTCGGCTGGGGCTGGCTGG AGGCGGTCCATCCGGGCGATGATGCGGTCGCCGAGGCCGCGTGGCGCGAGGCGCCGGTGAGCGGCCACCTCTCCTTCGAG CACCGGCTCCGCAACGCGGCCGAGGACCGCTTCTGCTGGTTCCAGACCCGGGCCGCGCCGGTCCGCGACGCGCAGGGCCG GATCGTCGAGTGGCTCGGCACCTCGACCGACATCGACGATCTGCGCCAGCTTCAGGAGCGGCAGCAGGTCATGGTCGCCG AATTGCAGCACCGGACCCGCAACCTGCTCGGCGTCGTGCGCTCCATCGCCAAGCAGACGATGGCCCAGACCGGGCCCGGC GAGACGTTCCGGCAGCGGTTCAACGACCGCCTGTCCGCCCTGTCCCGGGTTCAGGGCCTCCTCTCGCGCTCCGACCAGGA GCCGATCACGCTCCGCTCCCTGATCGAGACGGAACTCGCCGCCCTCGATGCTCCGGCCATGCAGGCGCGCATCCGGCTCC ACGGGCCGGTGGTGCGGCTGCGCAAGGCGACGGTGCAGACCTTCGCGCTGGCCCTGCACGAGCTCGCCACCAACGCGCTG AAATACGGCGCGCTCACCACCGCGCACGGGCGCCTGAGCGTGACGTGGCGGACCTACAGGGCGGACGATGGCGGCGGCCG GCTGCTGGTGGAATGGGTGGAGGAAGGCCTCGTCCGCGGACCGGAGCTGGCGGACGCGGTGCCGCGCGGCGGCTACGGGC GGGAGCTGATCGAGCACGCCCTGCCCTACGCCCTGAAGGCGACGACCAGCTACGAACTCGGCGCAACGGCGCTACATTGC TCGATCAACATCCCGCTCCCCGAGGGAGAAGCCACAGGCAGCCCCGCATGA
Upstream 100 bases:
>100_bases GACCCGCCCGCCGGGACGGCCCACCCGGCCGGTCGCGGAACGGGCTTCCGCCATCCGCGCTGCGCTCGCCCGAGCTGGAG CCTCACGAGTCGGTCACCGC
Downstream 100 bases:
>100_bases CTCCGAAACCACGCGCGCTGGCCGGCAGGCGGGTCCTGCTGGTCGAGGACGATTACTTCATCGCCGTCGATCTCAAGTCC GGCTTCGAGGAGGGCGGCGC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSEACIFSAGCSELADLVRTYDWAETPLGPIAGWPRSLVFAVSTLLQSPVPIVLLWGEDGIMIYNDAYSSFAGGRHPALL GSKVREGWPEVADFNDNVMRVGLAGGTLSYKDQELTLHRYGRPERVWMNLDYSPVFGEDGRPAGVIAIVVESTERVLAER RLRASEELFRTLAQGIPQLVWRAAIDGACIWSSPQWQAYTGQTDATSLGWGWLEAVHPGDDAVAEAAWREAPVSGHLSFE HRLRNAAEDRFCWFQTRAAPVRDAQGRIVEWLGTSTDIDDLRQLQERQQVMVAELQHRTRNLLGVVRSIAKQTMAQTGPG ETFRQRFNDRLSALSRVQGLLSRSDQEPITLRSLIETELAALDAPAMQARIRLHGPVVRLRKATVQTFALALHELATNAL KYGALTTAHGRLSVTWRTYRADDGGGRLLVEWVEEGLVRGPELADAVPRGGYGRELIEHALPYALKATTSYELGATALHC SINIPLPEGEATGSPA
Sequences:
>Translated_496_residues MSEACIFSAGCSELADLVRTYDWAETPLGPIAGWPRSLVFAVSTLLQSPVPIVLLWGEDGIMIYNDAYSSFAGGRHPALL GSKVREGWPEVADFNDNVMRVGLAGGTLSYKDQELTLHRYGRPERVWMNLDYSPVFGEDGRPAGVIAIVVESTERVLAER RLRASEELFRTLAQGIPQLVWRAAIDGACIWSSPQWQAYTGQTDATSLGWGWLEAVHPGDDAVAEAAWREAPVSGHLSFE HRLRNAAEDRFCWFQTRAAPVRDAQGRIVEWLGTSTDIDDLRQLQERQQVMVAELQHRTRNLLGVVRSIAKQTMAQTGPG ETFRQRFNDRLSALSRVQGLLSRSDQEPITLRSLIETELAALDAPAMQARIRLHGPVVRLRKATVQTFALALHELATNAL KYGALTTAHGRLSVTWRTYRADDGGGRLLVEWVEEGLVRGPELADAVPRGGYGRELIEHALPYALKATTSYELGATALHC SINIPLPEGEATGSPA >Mature_495_residues SEACIFSAGCSELADLVRTYDWAETPLGPIAGWPRSLVFAVSTLLQSPVPIVLLWGEDGIMIYNDAYSSFAGGRHPALLG SKVREGWPEVADFNDNVMRVGLAGGTLSYKDQELTLHRYGRPERVWMNLDYSPVFGEDGRPAGVIAIVVESTERVLAERR LRASEELFRTLAQGIPQLVWRAAIDGACIWSSPQWQAYTGQTDATSLGWGWLEAVHPGDDAVAEAAWREAPVSGHLSFEH RLRNAAEDRFCWFQTRAAPVRDAQGRIVEWLGTSTDIDDLRQLQERQQVMVAELQHRTRNLLGVVRSIAKQTMAQTGPGE TFRQRFNDRLSALSRVQGLLSRSDQEPITLRSLIETELAALDAPAMQARIRLHGPVVRLRKATVQTFALALHELATNALK YGALTTAHGRLSVTWRTYRADDGGGRLLVEWVEEGLVRGPELADAVPRGGYGRELIEHALPYALKATTSYELGATALHCS INIPLPEGEATGSPA
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54667; Mature: 54536
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEACIFSAGCSELADLVRTYDWAETPLGPIAGWPRSLVFAVSTLLQSPVPIVLLWGEDG CCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC IMIYNDAYSSFAGGRHPALLGSKVREGWPEVADFNDNVMRVGLAGGTLSYKDQELTLHRY EEEECCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHHHC GRPERVWMNLDYSPVFGEDGRPAGVIAIVVESTERVLAERRLRASEELFRTLAQGIPQLV CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRAAIDGACIWSSPQWQAYTGQTDATSLGWGWLEAVHPGDDAVAEAAWREAPVSGHLSFE HHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH HRLRNAAEDRFCWFQTRAAPVRDAQGRIVEWLGTSTDIDDLRQLQERQQVMVAELQHRTR HHHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH NLLGVVRSIAKQTMAQTGPGETFRQRFNDRLSALSRVQGLLSRSDQEPITLRSLIETELA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ALDAPAMQARIRLHGPVVRLRKATVQTFALALHELATNALKYGALTTAHGRLSVTWRTYR HCCCHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEEEEE ADDGGGRLLVEWVEEGLVRGPELADAVPRGGYGRELIEHALPYALKATTSYELGATALHC CCCCCCEEHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEE SINIPLPEGEATGSPA EEECCCCCCCCCCCCC >Mature Secondary Structure SEACIFSAGCSELADLVRTYDWAETPLGPIAGWPRSLVFAVSTLLQSPVPIVLLWGEDG CCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC IMIYNDAYSSFAGGRHPALLGSKVREGWPEVADFNDNVMRVGLAGGTLSYKDQELTLHRY EEEECCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHHHC GRPERVWMNLDYSPVFGEDGRPAGVIAIVVESTERVLAERRLRASEELFRTLAQGIPQLV CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRAAIDGACIWSSPQWQAYTGQTDATSLGWGWLEAVHPGDDAVAEAAWREAPVSGHLSFE HHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCHHH HRLRNAAEDRFCWFQTRAAPVRDAQGRIVEWLGTSTDIDDLRQLQERQQVMVAELQHRTR HHHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH NLLGVVRSIAKQTMAQTGPGETFRQRFNDRLSALSRVQGLLSRSDQEPITLRSLIETELA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ALDAPAMQARIRLHGPVVRLRKATVQTFALALHELATNALKYGALTTAHGRLSVTWRTYR HCCCHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEEEEE ADDGGGRLLVEWVEEGLVRGPELADAVPRGGYGRELIEHALPYALKATTSYELGATALHC CCCCCCEEHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEE SINIPLPEGEATGSPA EEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA