| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yciF [C]
Identifier: 170750626
GI number: 170750626
Start: 4490125
End: 4490619
Strand: Reverse
Name: yciF [C]
Synonym: Mrad2831_4236
Alternate gene names: 170750626
Gene position: 4490619-4490125 (Counterclockwise)
Preceding gene: 170750627
Following gene: 170750625
Centisome position: 73.89
GC content: 69.7
Gene sequence:
>495_bases ATGTCGGGACCCGACAGCCTGAAAGAGATCTATCTCGACGAGATGCAGGATCTCTGGTCGGCGAACGACCAGATGGTCCG GGCCGTGCAGGAACTCGGCGGCCAGGTCAGCGACGCCAACCTGAAGCGGATGCTCGACCGCTCCGTGGACGGGATCCGGA AGCACACCGACGTGCTGAAGAGCCTGATCCGGGCCAATGGCGGCGAGCCCCGACCGGAGCCCTGCAAGGGCATGGAGGGC CTCGTCGCCGAGGCGCTGAAGCACGGGATCAAGGCGGCCTCGCCCGACCCCCGTCTGCGCGACGTGGCGATCATCGCGCA GTATCAGCGCATGTCGCATTACGGCCTCGCCGGCTTCGGCTCGGCGGCCGCCTACGCCAAGGCCCTCGGCCGCACCGACG ACGCGTCCAAGCTGAAGCAGGCGGTGGACGAGATCGACGAGGGCGACGCGGCCGCGAGCCAGCTCGCCGAGGCGGTGGAG CGCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases GCGGCCGTCCATGGCGGCGCCCGGGCCGGATCGGTCCGGCGGCCCGGAACAGCGCCCGGCCCCCCGGGTTCGCCGGGCAT CGCGGACACAGGAGGCGACG
Downstream 100 bases:
>100_bases GGAGGCTGCGGGGCGCGGGATTTGGTCATCCGAACCTGGCGGGCCGGGTCGGCACCGACCGGTCCCCTATCAGGCACGGG GGCGGTGTAGTAGCCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSGPDSLKEIYLDEMQDLWSANDQMVRAVQELGGQVSDANLKRMLDRSVDGIRKHTDVLKSLIRANGGEPRPEPCKGMEG LVAEALKHGIKAASPDPRLRDVAIIAQYQRMSHYGLAGFGSAAAYAKALGRTDDASKLKQAVDEIDEGDAAASQLAEAVE RAAA
Sequences:
>Translated_164_residues MSGPDSLKEIYLDEMQDLWSANDQMVRAVQELGGQVSDANLKRMLDRSVDGIRKHTDVLKSLIRANGGEPRPEPCKGMEG LVAEALKHGIKAASPDPRLRDVAIIAQYQRMSHYGLAGFGSAAAYAKALGRTDDASKLKQAVDEIDEGDAAASQLAEAVE RAAA >Mature_163_residues SGPDSLKEIYLDEMQDLWSANDQMVRAVQELGGQVSDANLKRMLDRSVDGIRKHTDVLKSLIRANGGEPRPEPCKGMEGL VAEALKHGIKAASPDPRLRDVAIIAQYQRMSHYGLAGFGSAAAYAKALGRTDDASKLKQAVDEIDEGDAAASQLAEAVER AAA
Specific function: Unknown
COG id: COG3685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787512, Length=152, Percent_Identity=24.3421052631579, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17591; Mature: 17460
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPDSLKEIYLDEMQDLWSANDQMVRAVQELGGQVSDANLKRMLDRSVDGIRKHTDVLK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLIRANGGEPRPEPCKGMEGLVAEALKHGIKAASPDPRLRDVAIIAQYQRMSHYGLAGFG HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH SAAAYAKALGRTDDASKLKQAVDEIDEGDAAASQLAEAVERAAA HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SGPDSLKEIYLDEMQDLWSANDQMVRAVQELGGQVSDANLKRMLDRSVDGIRKHTDVLK CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLIRANGGEPRPEPCKGMEGLVAEALKHGIKAASPDPRLRDVAIIAQYQRMSHYGLAGFG HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH SAAAYAKALGRTDDASKLKQAVDEIDEGDAAASQLAEAVERAAA HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA