| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750609
Identifier: 170750609
GI number: 170750609
Start: 4468087
End: 4469484
Strand: Reverse
Name: 170750609
Synonym: Mrad2831_4219
Alternate gene names: NA
Gene position: 4469484-4468087 (Counterclockwise)
Preceding gene: 170750610
Following gene: 170750608
Centisome position: 73.54
GC content: 75.46
Gene sequence:
>1398_bases ATGGCGACCCTCCCCGCCTGGATCCTGCGCCGGGAGACCCTGCTCCTGGCCGGGGCCGCCCTCCTGGGCGCGGGCGGGGT CGCGGCCTGGGTCCTGCTCCAGGCGACGGTCCTGACCATCGCGGTCGCGCCGCGCGACGGCACCGAGCCCGGCCTGATCA AGGCCTACGCGGACGCGCTCGACGCCGCGCACGAGAAGGTCCGGCTGAGGATCCTGTCCTTCGACGACGTGCGCGAGAGC GCCGCCGCCTTGCAGGACGGGCGGGCCGACCTCGCGGTGGTCCGCCCCGACGTGCTGCTCCCGACCAACGGCCTGACCCT GGCGATCCTGCGCGACCAGGCGATGGTCATCGCCTCGCCCGAGCAGGCCGGGATCACCAGCTTCCCGAAGCTCGCCGGCA AGCGGCTCGGCATCGCGGCGCACCGGGACGCCGATCTCTGGCTGCTCCGGAATCTCCTCGGCTATTACGGGCTCACCCTG GAGGAGGCCGCCGGCCCGGCCCGGGACTCGGCGGTCCTGCTGGTCCCGGTCGACCAGGAGGCGGTGGCCGCCGCCTTCCG CGAGCGGCGGATCGACGCCTTCGTCAGCATCATCGCGCCCTCGGCACCCAAGGCGCTGGCCCTGGTCTCGGCCGTGCAGG GCGTCGCCCGCGGCGGCAAGGTGGCGTTCGTCGCCGTGGAGGATGACGGCGCCGTGATCGAGCGCTTCCCGCGGCTCCAG GCGGTCACGGTCCCGGGCGGCCTGTTCGGCGGCCGGCCGAAGCTGCCGGCCGACGACGTGAAGACGGTGGGCGCCTCGTA CCGGCTGATGGCCCGCGCCTCCCTGAGCCGGGTCGTGGCAGCCGACGTGACCCAGCAGCTCTTCGAGAAGCGCACCGCCG CCGCGCAGGCGACGGACGCCGCCGAGTACGTCCAGGCCCCGGCCTACGACACGACCGTGGCGGCCACCAGCGCCCGGATC CCGATCCATCCGGGGGCGATCGACTACTACGAGCGCGACCAGCACGGCTTCATCGAGCGCTACGGCGACACGCTCTACCT ACTCGGCGCGCTGGCGGGCGGGCTCGTCTCGGTGCTGGCCTGGATCCGGCAGCGCCTCGCCGGCCTGCGCCGCGAGCGCA TCGACGAGATCATGGACCGGCTCCTGGAGATCGCCGGGCAGGCCCGGGCGCTGCGCGACCCGGCGGCGATCGAGGCGCTC ACCGTCGAGGTCGACGCGCTGGCCATGGACGTGGTGCGCTACGCCCGGGCGCGGGAGCCGGACACCCGGACCATGTCGGC GGCGTCCGTCGCCATCGACACGGCGCGGGCGACCATCGCGGATTGCCGGGCGCGGGCGGCCGGGGACGGGGGGCGGACCG GGCGCGCCGTCCGGCTGCACGGCGCGGGCGGGGCCTGA
Upstream 100 bases:
>100_bases CGGCATGAAGCGGGTCAAGGCCGGGCCGCCGCGCCTGATCGGCGCCGCCCTGATGGTCGGCGGCATCGTGCTGATCTCGC TGTTCTGAGCGCCCGGGCCG
Downstream 100 bases:
>100_bases CATGTCCGCTCCAGCCACCGCGCCCGCAGCGGACGGGAGCGAGGCCGCGACGCGTGCCTCCGTCCGGGCACGCGTCGCGG CGCGGGTGCAGCGGTCCCTG
Product: TRAP-type transport system periplasmic component-like protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRES AAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTL EEAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARI PIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEAL TVEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA
Sequences:
>Translated_465_residues MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRES AAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTL EEAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARI PIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEAL TVEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA >Mature_464_residues ATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRESA AALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLE EAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQA VTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARIP IHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALT VEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49134; Mature: 49003
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADAL CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH DAAHEKVRLRILSFDDVRESAAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASP HHHHHEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEECCEEEEECC EQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLEEAAGPARDSAVLLVPVDQE CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHH AVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCE AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDA EEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEYVQAPAYDTTVAATSARIPIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLA HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH WIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALTVEVDALAMDVVRYARAREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHCCCC DTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure ATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADAL CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH DAAHEKVRLRILSFDDVRESAAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASP HHHHHEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEECCEEEEECC EQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLEEAAGPARDSAVLLVPVDQE CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHH AVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCE AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDA EEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEYVQAPAYDTTVAATSARIPIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLA HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH WIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALTVEVDALAMDVVRYARAREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHCCCC DTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA