| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is livJ [C]
Identifier: 170750164
GI number: 170750164
Start: 4008098
End: 4009234
Strand: Reverse
Name: livJ [C]
Synonym: Mrad2831_3766
Alternate gene names: 170750164
Gene position: 4009234-4008098 (Counterclockwise)
Preceding gene: 170750165
Following gene: 170750162
Centisome position: 65.96
GC content: 71.86
Gene sequence:
>1137_bases ATGAAGATCGGACGTTTCGTCCCCGCCCGCGGGCCGCTCCGGCCCGCGCTGATCGCCCTGAGCCTGTGTCTCGCGCTCCT GCCGGCCTCCCGCGCGGCGGCCGACGTGGTGATCGGCGTGGCGGTTCCGCGGTCTGGCCCCTACGTGGCGGTCGGCGAGC AGGTCCTGCGCGGCGTCGAGGCCGCGGCCCGGGACGCCAACGCCATGGGCGGCCTCGACGGCCAGCCCGTGACCCTGGAC GTGCAGGACGATGCCTGCGACTCGAACACCGCGATGGCGGTGGCCAACCACTTCGTCCGGTCCAACGTCCGGCTCGTCGT CGGCCATGTCTGCTCGAACGCCTCCATCGCGGCCTCCGACATCTACGCGCAGAACGGGGTGGTGATGATCACCGCGGCCT CGGTGGCGGCGCGGCTCACCGACCGGGGATTGCCGAACATCTTCCGGGTCTGCGGCCGCGACGACGATCAGGCCCGCCTG TCCGCCGCCGTGCTGGCCGAGCGGTTCCGCGACCGGAAGATCGCGCTGATCCAGGACCAGACGCCGGCGGCCCGCAGCCT CGCCGCCGCCACCAAGGACAACCTCAACCGCATCGGCGTGAACGAGGCGCTGTTCCTGTCGTTCTCGCCGAGCGACGCCG ACGACGCCGCCCTGGCCGACCGCCTCAAGAGCGCGGGGATCGAGGTCGTCTACTACGGCGGCGACGCCGCCGAGATGGGC CGCCTCGTGAAGATCGCGGCGGACCGGGGCTTCCGCCCCCAATGGTTCGGCACCTCGGCGATCGCCACGCCGGACTTCGC CAAGATCGCCGGGTCCGCGAGCAACGGCGTTCTGATGACCTTCTACCTCGACCCGAGCCGGCAGCCCGCCGCCGCGGCCG TCGTGAAGGCCTTCAAGGCCGAGGGCGTCGATCCCACCGGCTCCACGATCTACGGGTACGCGGCCATGCAGGCCCTGGTG GCGGCCGGCAACTTCGCCCACTCCACCGAGCCGAGGCCCATCGCGCAGGCGCTGCACACCGAGCGCTTCGATCTCGTGCT CGGCACCGTCGGCTTCGACGCCAAGGGCGACGTCACCGCGCAGGGCTACGTGCTCTACGTGTGGAAGGACGGGAGCTTCA CGCCGGCCGGCAAGTGA
Upstream 100 bases:
>100_bases GTCCTCGCGTATGGGCACTGGGTGCGGGGCGGGATCGAGGCTACGGAGCCGCATCCGCCGTCGCGCCGACGTGTCGCGCA AGGATGCCCAGAAGAGCCCG
Downstream 100 bases:
>100_bases GGGGCGGGCTCCTCATCACAGGGCCTGCGCGGCGTCGACCTCCGCGCCGCGGCCGAGCCCGCGCAGCAGCTCGGCGAGAT GCGGGCGAACCCGCAACTGC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKIGRFVPARGPLRPALIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGLDGQPVTLD VQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITAASVAARLTDRGLPNIFRVCGRDDDQARL SAAVLAERFRDRKIALIQDQTPAARSLAAATKDNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMG RLVKIAADRGFRPQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAEGVDPTGSTIYGYAAMQALV AAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWKDGSFTPAGK
Sequences:
>Translated_378_residues MKIGRFVPARGPLRPALIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGLDGQPVTLD VQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITAASVAARLTDRGLPNIFRVCGRDDDQARL SAAVLAERFRDRKIALIQDQTPAARSLAAATKDNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMG RLVKIAADRGFRPQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAEGVDPTGSTIYGYAAMQALV AAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWKDGSFTPAGK >Mature_378_residues MKIGRFVPARGPLRPALIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVEAAARDANAMGGLDGQPVTLD VQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASDIYAQNGVVMITAASVAARLTDRGLPNIFRVCGRDDDQARL SAAVLAERFRDRKIALIQDQTPAARSLAAATKDNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMG RLVKIAADRGFRPQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKAEGVDPTGSTIYGYAAMQALV AAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTAQGYVLYVWKDGSFTPAGK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=351, Percent_Identity=35.6125356125356, Blast_Score=217, Evalue=9e-58, Organism=Escherichia coli, GI1789867, Length=362, Percent_Identity=33.4254143646409, Blast_Score=202, Evalue=3e-53,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39494; Mature: 39494
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGRFVPARGPLRPALIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHH AAARDANAMGGLDGQPVTLDVQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASD HHHHCCHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEHHH IYAQNGVVMITAASVAARLTDRGLPNIFRVCGRDDDQARLSAAVLAERFRDRKIALIQDQ HEECCCEEEEEHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECC TPAARSLAAATKDNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMG CCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHHHHC RLVKIAADRGFRPQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKA CEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EGVDPTGSTIYGYAAMQALVAAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTA CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCEEE QGYVLYVWKDGSFTPAGK CCEEEEEEECCCCCCCCC >Mature Secondary Structure MKIGRFVPARGPLRPALIALSLCLALLPASRAAADVVIGVAVPRSGPYVAVGEQVLRGVE CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHH AAARDANAMGGLDGQPVTLDVQDDACDSNTAMAVANHFVRSNVRLVVGHVCSNASIAASD HHHHCCHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEHHH IYAQNGVVMITAASVAARLTDRGLPNIFRVCGRDDDQARLSAAVLAERFRDRKIALIQDQ HEECCCEEEEEHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECC TPAARSLAAATKDNLNRIGVNEALFLSFSPSDADDAALADRLKSAGIEVVYYGGDAAEMG CCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHHHHC RLVKIAADRGFRPQWFGTSAIATPDFAKIAGSASNGVLMTFYLDPSRQPAAAAVVKAFKA CEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EGVDPTGSTIYGYAAMQALVAAGNFAHSTEPRPIAQALHTERFDLVLGTVGFDAKGDVTA CCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCEEE QGYVLYVWKDGSFTPAGK CCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA