| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yiaO [C]
Identifier: 170750162
GI number: 170750162
Start: 4006232
End: 4007371
Strand: Reverse
Name: yiaO [C]
Synonym: Mrad2831_3764
Alternate gene names: 170750162
Gene position: 4007371-4006232 (Counterclockwise)
Preceding gene: 170750164
Following gene: 170750161
Centisome position: 65.93
GC content: 72.63
Gene sequence:
>1140_bases ATGCCGTTGGACGAACCTCACCTCGCGCGATCCCCCGCGGCCGGGACGCGGCGCCGCAGCGTGCTGACCGCCGGCCTCGG CGCGGCCGCGGCGCTCACCGGTCCGCTCGCCGCGCCGGCCCGGGCCGAATCCGCCCCGGAGCTGCGCTGGCGGCTGTCCT CCGCCTACGCCAAGACCCTCGACATCCTGTACGGTGCGCCCGAGGCGCTCAGCCGGATCGTCGCGGAGGCCACCGACGGG CGCTTCCAGATCCAGGTTCAGGGGCCCGGCGAGCCGGTCCCGGCCGAGGGCCTGCTCGACGCCGTGGCCGCCGGCACCGT CGAGATGGGCCACGGGCCGGCGACCCTCGGCATGGCCAAGGATCCGACCTTCGCGCTGGCGACTGCGGTGCCCTTCGGCC TCAATGCCCGGGGCGCCGCCGCGTGGTGGCAGGCGGGCGGCGCCGCCGAACTGTTCGCCGAGGTCTTCGCCAAGGCCGGG CTGGTCTGCCTGCCGGGCGGCAACACCGGCGCCCAGATGGGCGGCTGGTTCCGCCGCGAGATCAAGAGCCTCTCCGACCT GCAGGGGCTGAAGTTCCGGATCGGCGGCATGGGCGGGCAAGTGCTCGCCAAGTTCGGCGTGCAGCCGCAGGCGGTCCCGG GTCCCGAGATCTACGCGGCCCTGGAGAGCAAGAAGCTCGACGCCGCCGAGTGGATCGGCCCCTACGACGACGAGCGGCTC GGCCTGCAGAAGGTCGCGCCGATCTACCACTATCCCGGCTTCTGGGAGGGTGGCGCCATGCTGCACTTCTGGTTCAACGC CGAGAAGTGGAAGGCGCTGCCGAAATCCTACCAGGGGATCCTCCGGGCCGCGGCGGCCGAGGTCGGCGCCGACGTCCAGG CGAAGTACGACGCCCGCAACCCGCAGGCCCTGCGCCGGCTGGTGGCCGGCGGCGCGCAGCTGCGGCCGTTCCCCCAGGAC GTCATGGAGGCCGCCCTCAAGAACGCCAACGACGTCTACGCCGAGATGGCCGCCAAGAACGCCGATTTCCGCCGCGTCTA CGAGGCGATGCGGACCTTCCGCAACGAGGAGTACCTCTGGTTCCAGGTGGCGGAGTACACCTACGACAACTTCATGATCC GCGCCCGGGCGCGGGGCTGA
Upstream 100 bases:
>100_bases ACGGAACTGCCCCGGCCGCCCGCGGCTTTCGAGAACCGGCACGCACGTGCTACCTGCGACCCCCGATCCGGCCCGGCCGG GCCGGACCTGATCGGACGAG
Downstream 100 bases:
>100_bases GGCGCGCGCCGCCGCGGGAGGCCGGCTCGGCGCCGCGGGTCCGTCAAAGATGGGGACGTCGGGGGCGCGCCCGATTGCAA CGCGATCGGGAACGGCCTTA
Product: TRAP dicarboxylate transporter subunit DctP
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDG RFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAG LVCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQD VMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG
Sequences:
>Translated_379_residues MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDG RFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAG LVCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQD VMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG >Mature_378_residues PLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDGR FQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGL VCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERLG LQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQDV MEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG
Specific function: Unknown
COG id: COG4663
COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40767; Mature: 40636
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTL CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH DILYGAPEALSRIVAEATDGRFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAK HHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCC DPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGLVCLPGGNTGAQMGGWFRRE CCCEEEEHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH IKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARN CHHHHCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC PQALRRLVAGGAQLRPFPQDVMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLW HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE FQVAEYTYDNFMIRARARG EEEEEECCCCEEEEEECCC >Mature Secondary Structure PLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTL CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH DILYGAPEALSRIVAEATDGRFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAK HHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCC DPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGLVCLPGGNTGAQMGGWFRRE CCCEEEEHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH IKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARN CHHHHCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC PQALRRLVAGGAQLRPFPQDVMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLW HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE FQVAEYTYDNFMIRARARG EEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA