Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yiaO [C]

Identifier: 170750162

GI number: 170750162

Start: 4006232

End: 4007371

Strand: Reverse

Name: yiaO [C]

Synonym: Mrad2831_3764

Alternate gene names: 170750162

Gene position: 4007371-4006232 (Counterclockwise)

Preceding gene: 170750164

Following gene: 170750161

Centisome position: 65.93

GC content: 72.63

Gene sequence:

>1140_bases
ATGCCGTTGGACGAACCTCACCTCGCGCGATCCCCCGCGGCCGGGACGCGGCGCCGCAGCGTGCTGACCGCCGGCCTCGG
CGCGGCCGCGGCGCTCACCGGTCCGCTCGCCGCGCCGGCCCGGGCCGAATCCGCCCCGGAGCTGCGCTGGCGGCTGTCCT
CCGCCTACGCCAAGACCCTCGACATCCTGTACGGTGCGCCCGAGGCGCTCAGCCGGATCGTCGCGGAGGCCACCGACGGG
CGCTTCCAGATCCAGGTTCAGGGGCCCGGCGAGCCGGTCCCGGCCGAGGGCCTGCTCGACGCCGTGGCCGCCGGCACCGT
CGAGATGGGCCACGGGCCGGCGACCCTCGGCATGGCCAAGGATCCGACCTTCGCGCTGGCGACTGCGGTGCCCTTCGGCC
TCAATGCCCGGGGCGCCGCCGCGTGGTGGCAGGCGGGCGGCGCCGCCGAACTGTTCGCCGAGGTCTTCGCCAAGGCCGGG
CTGGTCTGCCTGCCGGGCGGCAACACCGGCGCCCAGATGGGCGGCTGGTTCCGCCGCGAGATCAAGAGCCTCTCCGACCT
GCAGGGGCTGAAGTTCCGGATCGGCGGCATGGGCGGGCAAGTGCTCGCCAAGTTCGGCGTGCAGCCGCAGGCGGTCCCGG
GTCCCGAGATCTACGCGGCCCTGGAGAGCAAGAAGCTCGACGCCGCCGAGTGGATCGGCCCCTACGACGACGAGCGGCTC
GGCCTGCAGAAGGTCGCGCCGATCTACCACTATCCCGGCTTCTGGGAGGGTGGCGCCATGCTGCACTTCTGGTTCAACGC
CGAGAAGTGGAAGGCGCTGCCGAAATCCTACCAGGGGATCCTCCGGGCCGCGGCGGCCGAGGTCGGCGCCGACGTCCAGG
CGAAGTACGACGCCCGCAACCCGCAGGCCCTGCGCCGGCTGGTGGCCGGCGGCGCGCAGCTGCGGCCGTTCCCCCAGGAC
GTCATGGAGGCCGCCCTCAAGAACGCCAACGACGTCTACGCCGAGATGGCCGCCAAGAACGCCGATTTCCGCCGCGTCTA
CGAGGCGATGCGGACCTTCCGCAACGAGGAGTACCTCTGGTTCCAGGTGGCGGAGTACACCTACGACAACTTCATGATCC
GCGCCCGGGCGCGGGGCTGA

Upstream 100 bases:

>100_bases
ACGGAACTGCCCCGGCCGCCCGCGGCTTTCGAGAACCGGCACGCACGTGCTACCTGCGACCCCCGATCCGGCCCGGCCGG
GCCGGACCTGATCGGACGAG

Downstream 100 bases:

>100_bases
GGCGCGCGCCGCCGCGGGAGGCCGGCTCGGCGCCGCGGGTCCGTCAAAGATGGGGACGTCGGGGGCGCGCCCGATTGCAA
CGCGATCGGGAACGGCCTTA

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDG
RFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAG
LVCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL
GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQD
VMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG

Sequences:

>Translated_379_residues
MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDG
RFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAG
LVCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL
GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQD
VMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG
>Mature_378_residues
PLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTLDILYGAPEALSRIVAEATDGR
FQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAKDPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGL
VCLPGGNTGAQMGGWFRREIKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERLG
LQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARNPQALRRLVAGGAQLRPFPQDV
MEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLWFQVAEYTYDNFMIRARARG

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40767; Mature: 40636

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTL
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DILYGAPEALSRIVAEATDGRFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAK
HHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCC
DPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGLVCLPGGNTGAQMGGWFRRE
CCCEEEEHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH
IKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL
HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARN
CHHHHCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PQALRRLVAGGAQLRPFPQDVMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLW
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
FQVAEYTYDNFMIRARARG
EEEEEECCCCEEEEEECCC
>Mature Secondary Structure 
PLDEPHLARSPAAGTRRRSVLTAGLGAAAALTGPLAAPARAESAPELRWRLSSAYAKTL
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
DILYGAPEALSRIVAEATDGRFQIQVQGPGEPVPAEGLLDAVAAGTVEMGHGPATLGMAK
HHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCCC
DPTFALATAVPFGLNARGAAAWWQAGGAAELFAEVFAKAGLVCLPGGNTGAQMGGWFRRE
CCCEEEEHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH
IKSLSDLQGLKFRIGGMGGQVLAKFGVQPQAVPGPEIYAALESKKLDAAEWIGPYDDERL
HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
GLQKVAPIYHYPGFWEGGAMLHFWFNAEKWKALPKSYQGILRAAAAEVGADVQAKYDARN
CHHHHCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PQALRRLVAGGAQLRPFPQDVMEAALKNANDVYAEMAAKNADFRRVYEAMRTFRNEEYLW
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEE
FQVAEYTYDNFMIRARARG
EEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA