| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is foxA [H]
Identifier: 170749807
GI number: 170749807
Start: 3615854
End: 3618022
Strand: Direct
Name: foxA [H]
Synonym: Mrad2831_3406
Alternate gene names: 170749807
Gene position: 3615854-3618022 (Clockwise)
Preceding gene: 170749806
Following gene: 170749811
Centisome position: 59.49
GC content: 69.06
Gene sequence:
>2169_bases GTGGTACGGCGTAACTGTGCAAATCCTTGCACACAGGCTTCGCGCGGCGTTTCTGCGCGCGCAGTCAAGATCTCCCTGAT CCTCGCACCGGTATTCCTTCCGTCCTCAGGCTCGGCACAATCTGCCGTTGACAGCGCCCAGGAGATCGAGCTGGAGGAGC TCTCGGTGGCGGGGATCGGCGACGGGAATACCCGCGTCGACGGCTACCGGGTCGCGCGCGCGGTGAGCGCCACGCGGACC GACACGCCCGTGCGCGAGGTGCCCCAGACCATCGTGGCGGTACCGCAGGAGGTGCTGGAGGACGCCGCGGCCACGCGGAT CGACACGGCCCTCGACCTCGCGGGTGTCGGCCGCGGCAACAATTTCGGTGGCCTCGGTCTGACCGAGTTCACGATCCGCG GCGTGGCCACCGGCGAGTATTACCGCAACGGATTCCCGATCAATCGCGGTTACCCGAACAGCCCCGACATCGTCTCCATC GAGCGCATCGAGGTGCTGAAAGGCCCCTCGGCCTTCCTGTACGGCCGCGGCGATCCCGGCGGCACCTTCAACATCGTGAC CAAGCAGCCCCTCGCGGCGCGCTCCCTCACGATCGGCACGCAGTACGGCAGCTTCGGCGCCAAGCGGAGCACCTTCGACG CCACGGGCGCCCTCGACGAGAGCGGGCAGGTGCTGGCGCGCGTCACCGGCGCCGTCGAGGACAACGGCAGCTTCCGGGAC TTCGTCACCAGCGACCGCTACGCCCTCGCCCCGGTCATCGCCTGGAAGCCGAATGCGGACACGACCATCACCCTGGAGGG TGACTTCATCAGCACGGCGCAGACCTTCGACCGCGGCATCGTGCCGTTGGGAGGCAACGTGCGCGCCCTGCCGCGCAGCC GCTTCATCGGCGAGCCGGGCCTGCCGCCGGCCCATGTCGACAACGCCCTCGGCCAGCTGCGCGTCGAGCACCGGTTCGAC CAGGACTGGGTGCTGAACGCCGGCGCGCAGGTGCTCGGCGGGAACCTGTCGGGTTACGGGGTCGGCGCCATCGGCCTGCT GCCGGATGGCCGGACCCAGCGGCGAACCCTGGAATGGCGGGACCTGACGTGGTCCGATCTCGACCTGCAGGCGAATCTCG CGGGCAAATTCGAGACCGGCCCGTTCCGCCACACGCTCCTGCTCGGGCTGGAATACGACAGCTACCGCTACCGCGAGGTG TTCAACCGCTCGAACGTCGCGACGAACCCGTTCCTCCTCGACCTGCTGGCACCGCGCTACGGCCAGCCGTTGCCGCCGAT CACCGCGCGGGTCACGAACTTCCTGCAGAAGACCGAGAGCTACGCCGGCTACGTGCAGGACCAGATCGACCTGACGCCCC GCCTCCACGCGCTCCTGGGTGTGCGGGTCGAGGATCTCGGGCTGGTCTCGACGAACAACCTCACGAAGGGCACCACCAGC CTGCAGGGCCTGGTGGCGACGCCGCGCTTCGGCCTGCTCTACGACCTGACCGACACGGTCTCGGTCTACGGCAATTACGC CCGCTCCTTCCGGCCCAATATCGGCACGGATCGCAGCGGCCGGCCCTTCGCGTTCGAGGAGGGTGAGGGCTACGAGGCCG GCGCGAAGGTCAGCCTCCTCGACGGCCGCCTCGACGCCACCGCCGCCCTGTTCGAGATCCGGCGGTCCAACGTCCTCAGC ACCGACCCGGTCGATCCGAACTTCAGCGTCGCCACCGGCGCAATCCGCAGCCGCGGCTTCGATCTGACCGCGGCGGGCTA CCTCGCACCGGGCTGGCGCGTGATCGGGACCTACACGCGCGTCGACGCGGCCGTCGCCCGCGACAACACCCTTCCGGTCG GCACGCGCATCGCCAACGTGCCCGCCAACAGCCTCGCGTTCCAGACGGTCTACGAGTTCCAGAGCGGCGAGCTGAAGGGT CTGGGGCTCGGCGGCGGCCTCGACTTCGTCGGTCGTCGCGCCGCGGGGACGGCGCTCGCGACCTTCAACCTGCCGCAATA CACGCTGGTCAACCTGATCTCGTACTACCAGATCGCGCCGGGCGTGCGGATCTACCTGAACGTCGACAACGTGTTCGACG CGACGTTCTACGACCGGGCATTCCAGAACCGCTACGCGACGCCGGGGCAGCCGCGCACGATCATCGGCGGCGTCGCGGCC CGGTTCTGA
Upstream 100 bases:
>100_bases TTATTCGAAATCCAGCCTTCGGGATGACCTCGAGAGCAAGCTTGACCGTGAGTGTTTCTCTACCGTATCTGGCGCCACTC GAAACAGAATGGTCGACATC
Downstream 100 bases:
>100_bases GCCCCCGGCCTACGCCGCGTCCGCCCTCATCCAGCCGAGCCCCGCCTCGGTGCCGGCCGCGGGATGGTACTCGCAGCCGA CGAAGCCGGAATAGCCGACC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MVRRNCANPCTQASRGVSARAVKISLILAPVFLPSSGSAQSAVDSAQEIELEELSVAGIGDGNTRVDGYRVARAVSATRT DTPVREVPQTIVAVPQEVLEDAAATRIDTALDLAGVGRGNNFGGLGLTEFTIRGVATGEYYRNGFPINRGYPNSPDIVSI ERIEVLKGPSAFLYGRGDPGGTFNIVTKQPLAARSLTIGTQYGSFGAKRSTFDATGALDESGQVLARVTGAVEDNGSFRD FVTSDRYALAPVIAWKPNADTTITLEGDFISTAQTFDRGIVPLGGNVRALPRSRFIGEPGLPPAHVDNALGQLRVEHRFD QDWVLNAGAQVLGGNLSGYGVGAIGLLPDGRTQRRTLEWRDLTWSDLDLQANLAGKFETGPFRHTLLLGLEYDSYRYREV FNRSNVATNPFLLDLLAPRYGQPLPPITARVTNFLQKTESYAGYVQDQIDLTPRLHALLGVRVEDLGLVSTNNLTKGTTS LQGLVATPRFGLLYDLTDTVSVYGNYARSFRPNIGTDRSGRPFAFEEGEGYEAGAKVSLLDGRLDATAALFEIRRSNVLS TDPVDPNFSVATGAIRSRGFDLTAAGYLAPGWRVIGTYTRVDAAVARDNTLPVGTRIANVPANSLAFQTVYEFQSGELKG LGLGGGLDFVGRRAAGTALATFNLPQYTLVNLISYYQIAPGVRIYLNVDNVFDATFYDRAFQNRYATPGQPRTIIGGVAA RF
Sequences:
>Translated_722_residues MVRRNCANPCTQASRGVSARAVKISLILAPVFLPSSGSAQSAVDSAQEIELEELSVAGIGDGNTRVDGYRVARAVSATRT DTPVREVPQTIVAVPQEVLEDAAATRIDTALDLAGVGRGNNFGGLGLTEFTIRGVATGEYYRNGFPINRGYPNSPDIVSI ERIEVLKGPSAFLYGRGDPGGTFNIVTKQPLAARSLTIGTQYGSFGAKRSTFDATGALDESGQVLARVTGAVEDNGSFRD FVTSDRYALAPVIAWKPNADTTITLEGDFISTAQTFDRGIVPLGGNVRALPRSRFIGEPGLPPAHVDNALGQLRVEHRFD QDWVLNAGAQVLGGNLSGYGVGAIGLLPDGRTQRRTLEWRDLTWSDLDLQANLAGKFETGPFRHTLLLGLEYDSYRYREV FNRSNVATNPFLLDLLAPRYGQPLPPITARVTNFLQKTESYAGYVQDQIDLTPRLHALLGVRVEDLGLVSTNNLTKGTTS LQGLVATPRFGLLYDLTDTVSVYGNYARSFRPNIGTDRSGRPFAFEEGEGYEAGAKVSLLDGRLDATAALFEIRRSNVLS TDPVDPNFSVATGAIRSRGFDLTAAGYLAPGWRVIGTYTRVDAAVARDNTLPVGTRIANVPANSLAFQTVYEFQSGELKG LGLGGGLDFVGRRAAGTALATFNLPQYTLVNLISYYQIAPGVRIYLNVDNVFDATFYDRAFQNRYATPGQPRTIIGGVAA RF >Mature_722_residues MVRRNCANPCTQASRGVSARAVKISLILAPVFLPSSGSAQSAVDSAQEIELEELSVAGIGDGNTRVDGYRVARAVSATRT DTPVREVPQTIVAVPQEVLEDAAATRIDTALDLAGVGRGNNFGGLGLTEFTIRGVATGEYYRNGFPINRGYPNSPDIVSI ERIEVLKGPSAFLYGRGDPGGTFNIVTKQPLAARSLTIGTQYGSFGAKRSTFDATGALDESGQVLARVTGAVEDNGSFRD FVTSDRYALAPVIAWKPNADTTITLEGDFISTAQTFDRGIVPLGGNVRALPRSRFIGEPGLPPAHVDNALGQLRVEHRFD QDWVLNAGAQVLGGNLSGYGVGAIGLLPDGRTQRRTLEWRDLTWSDLDLQANLAGKFETGPFRHTLLLGLEYDSYRYREV FNRSNVATNPFLLDLLAPRYGQPLPPITARVTNFLQKTESYAGYVQDQIDLTPRLHALLGVRVEDLGLVSTNNLTKGTTS LQGLVATPRFGLLYDLTDTVSVYGNYARSFRPNIGTDRSGRPFAFEEGEGYEAGAKVSLLDGRLDATAALFEIRRSNVLS TDPVDPNFSVATGAIRSRGFDLTAAGYLAPGWRVIGTYTRVDAAVARDNTLPVGTRIANVPANSLAFQTVYEFQSGELKG LGLGGGLDFVGRRAAGTALATFNLPQYTLVNLISYYQIAPGVRIYLNVDNVFDATFYDRAFQNRYATPGQPRTIIGGVAA RF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=695, Percent_Identity=26.4748201438849, Blast_Score=188, Evalue=1e-48, Organism=Escherichia coli, GI1787024, Length=711, Percent_Identity=25.1758087201125, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI1787344, Length=751, Percent_Identity=24.1011984021305, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77750; Mature: 77750
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRNCANPCTQASRGVSARAVKISLILAPVFLPSSGSAQSAVDSAQEIELEELSVAGIG CCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECC DGNTRVDGYRVARAVSATRTDTPVREVPQTIVAVPQEVLEDAAATRIDTALDLAGVGRGN CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC NFGGLGLTEFTIRGVATGEYYRNGFPINRGYPNSPDIVSIERIEVLKGPSAFLYGRGDPG CCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCC GTFNIVTKQPLAARSLTIGTQYGSFGAKRSTFDATGALDESGQVLARVTGAVEDNGSFRD CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH FVTSDRYALAPVIAWKPNADTTITLEGDFISTAQTFDRGIVPLGGNVRALPRSRFIGEPG HHCCCCEEEEEEEEECCCCCEEEEEECCEECHHHHHHCCCEECCCCEEECCHHHCCCCCC LPPAHVDNALGQLRVEHRFDQDWVLNAGAQVLGGNLSGYGVGAIGLLPDGRTQRRTLEWR CCHHHHHHHHHHEEHHHCCCCCCEECCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEEC DLTWSDLDLQANLAGKFETGPFRHTLLLGLEYDSYRYREVFNRSNVATNPFLLDLLAPRY CCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCCCC GQPLPPITARVTNFLQKTESYAGYVQDQIDLTPRLHALLGVRVEDLGLVSTNNLTKGTTS CCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCEEHHEEEEECCCCCCCCCC LQGLVATPRFGLLYDLTDTVSVYGNYARSFRPNIGTDRSGRPFAFEEGEGYEAGAKVSLL CCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE DGRLDATAALFEIRRSNVLSTDPVDPNFSVATGAIRSRGFDLTAAGYLAPGWRVIGTYTR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCCCEEECCCCCCCCEEEEEHHH VDAAVARDNTLPVGTRIANVPANSLAFQTVYEFQSGELKGLGLGGGLDFVGRRAAGTALA HHHHHHCCCCCCCCCEEECCCCCHHHHHHHEECCCCCEEEEECCCCHHHHCCCCCCCEEE TFNLPQYTLVNLISYYQIAPGVRIYLNVDNVFDATFYDRAFQNRYATPGQPRTIIGGVAA EECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEECHHHH RF CC >Mature Secondary Structure MVRRNCANPCTQASRGVSARAVKISLILAPVFLPSSGSAQSAVDSAQEIELEELSVAGIG CCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECC DGNTRVDGYRVARAVSATRTDTPVREVPQTIVAVPQEVLEDAAATRIDTALDLAGVGRGN CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC NFGGLGLTEFTIRGVATGEYYRNGFPINRGYPNSPDIVSIERIEVLKGPSAFLYGRGDPG CCCCCCCEEEEEEEEEECCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCC GTFNIVTKQPLAARSLTIGTQYGSFGAKRSTFDATGALDESGQVLARVTGAVEDNGSFRD CEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH FVTSDRYALAPVIAWKPNADTTITLEGDFISTAQTFDRGIVPLGGNVRALPRSRFIGEPG HHCCCCEEEEEEEEECCCCCEEEEEECCEECHHHHHHCCCEECCCCEEECCHHHCCCCCC LPPAHVDNALGQLRVEHRFDQDWVLNAGAQVLGGNLSGYGVGAIGLLPDGRTQRRTLEWR CCHHHHHHHHHHEEHHHCCCCCCEECCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEEC DLTWSDLDLQANLAGKFETGPFRHTLLLGLEYDSYRYREVFNRSNVATNPFLLDLLAPRY CCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCCCC GQPLPPITARVTNFLQKTESYAGYVQDQIDLTPRLHALLGVRVEDLGLVSTNNLTKGTTS CCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCEEHHEEEEECCCCCCCCCC LQGLVATPRFGLLYDLTDTVSVYGNYARSFRPNIGTDRSGRPFAFEEGEGYEAGAKVSLL CCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE DGRLDATAALFEIRRSNVLSTDPVDPNFSVATGAIRSRGFDLTAAGYLAPGWRVIGTYTR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHCCCCEEECCCCCCCCEEEEEHHH VDAAVARDNTLPVGTRIANVPANSLAFQTVYEFQSGELKGLGLGGGLDFVGRRAAGTALA HHHHHHCCCCCCCCCEEECCCCCHHHHHHHEECCCCCEEEEECCCCHHHHCCCCCCCEEE TFNLPQYTLVNLISYYQIAPGVRIYLNVDNVFDATFYDRAFQNRYATPGQPRTIIGGVAA EECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEECHHHH RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]