| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yfbT [H]
Identifier: 170749784
GI number: 170749784
Start: 3592398
End: 3593063
Strand: Direct
Name: yfbT [H]
Synonym: Mrad2831_3383
Alternate gene names: 170749784
Gene position: 3592398-3593063 (Clockwise)
Preceding gene: 170749779
Following gene: 170749785
Centisome position: 59.11
GC content: 74.62
Gene sequence:
>666_bases ATGCCCGAGTCAGCCCTCCCGTCGCGCCCCCTGGCGGCGCTCCTGTTCGACATGGACGGGACGATCATCAGCTCGATCGC CTCCGCGGAGCGGATCTGGTCGCGCTGGGCCGAGGCGCACGGCCTCGACGCGGCGTCCTTCCTGCCGACGATCCACGGCG TGCAGTCGGTCGAGACCATCCGGCGGCTGAACCTGCCGGGCGTCGATCCCGTGGCCGAGGCCGCCGCGATCACCGAGGCC GAGATGGCGGATGTCGACGACATCGTGGCCATCCCGGGGGCGCGGGCCTTCCTGGAGGCGCTGCCGCGCCACCGCTGGGC GATCGTCACCTCGGCGCCCCGGCGGCTGGCGGAGCGCCGCCTCGCGGCGGCCGGCATGCCGGTCCCCGACCTTCTCGTGG CCGCCGAGGACGTAGCGCGGGGCAAGCCCGCGCCGGACTGCTTCCTGCTGGCGGCCGGACGCCTCGGCGTCGCGGCGGCG GACTGCCTCGTGTTCGAGGACGCCCCGGCCGGCATCCGTGCGGCCGAGGCCGCGGATGCGGCCGTCGTGGTCGTCACCGC CACCCATCACGAGCCGGTGAGGACCAATCATCCCACGATTGCCGACTACACCGGGCTGCGCGTCGCGGCCGCGGCGGAGG GGATCCGGGTGACACAAACCGCCTGA
Upstream 100 bases:
>100_bases GACCCCGGGCGAAGGCGTCCCGGAGGCCCGGCCGCCCGCGAGACGCGGCCATGCGCGCGGGCCGGTTGCCGGGACGGCGG CGCCGGCCTAGCCCTCGCCC
Downstream 100 bases:
>100_bases GCCTTTCCATCCCAGCCGCGGACCGCTGGCGGCCGGTCCCGCCCGGTCGTATCGCCCGCATGCGGCGCACGGATCGCGGT GAAGGGACAGAGGCATGGCA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MPESALPSRPLAALLFDMDGTIISSIASAERIWSRWAEAHGLDAASFLPTIHGVQSVETIRRLNLPGVDPVAEAAAITEA EMADVDDIVAIPGARAFLEALPRHRWAIVTSAPRRLAERRLAAAGMPVPDLLVAAEDVARGKPAPDCFLLAAGRLGVAAA DCLVFEDAPAGIRAAEAADAAVVVVTATHHEPVRTNHPTIADYTGLRVAAAAEGIRVTQTA
Sequences:
>Translated_221_residues MPESALPSRPLAALLFDMDGTIISSIASAERIWSRWAEAHGLDAASFLPTIHGVQSVETIRRLNLPGVDPVAEAAAITEA EMADVDDIVAIPGARAFLEALPRHRWAIVTSAPRRLAERRLAAAGMPVPDLLVAAEDVARGKPAPDCFLLAAGRLGVAAA DCLVFEDAPAGIRAAEAADAAVVVVTATHHEPVRTNHPTIADYTGLRVAAAAEGIRVTQTA >Mature_220_residues PESALPSRPLAALLFDMDGTIISSIASAERIWSRWAEAHGLDAASFLPTIHGVQSVETIRRLNLPGVDPVAEAAAITEAE MADVDDIVAIPGARAFLEALPRHRWAIVTSAPRRLAERRLAAAGMPVPDLLVAAEDVARGKPAPDCFLLAAGRLGVAAAD CLVFEDAPAGIRAAEAADAAVVVVTATHHEPVRTNHPTIADYTGLRVAAAAEGIRVTQTA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=179, Percent_Identity=41.8994413407821, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1789046, Length=176, Percent_Identity=36.9318181818182, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790151, Length=205, Percent_Identity=27.8048780487805, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321833, Length=241, Percent_Identity=30.7053941908714, Blast_Score=101, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6321834, Length=232, Percent_Identity=30.6034482758621, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320905, Length=183, Percent_Identity=27.8688524590164, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322136, Length=181, Percent_Identity=28.7292817679558, Blast_Score=68, Evalue=9e-13, Organism=Drosophila melanogaster, GI116008157, Length=216, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI17137324, Length=211, Percent_Identity=28.436018957346, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23096; Mature: 22964
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESALPSRPLAALLFDMDGTIISSIASAERIWSRWAEAHGLDAASFLPTIHGVQSVETI CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RRLNLPGVDPVAEAAAITEAEMADVDDIVAIPGARAFLEALPRHRWAIVTSAPRRLAERR HHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCEEEEEHHHHHHHHHH LAAAGMPVPDLLVAAEDVARGKPAPDCFLLAAGRLGVAAADCLVFEDAPAGIRAAEAADA HHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHEEEECCCCCCCCHHCCCCC AVVVVTATHHEPVRTNHPTIADYTGLRVAAAAEGIRVTQTA EEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHCCEEEECCC >Mature Secondary Structure PESALPSRPLAALLFDMDGTIISSIASAERIWSRWAEAHGLDAASFLPTIHGVQSVETI CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RRLNLPGVDPVAEAAAITEAEMADVDDIVAIPGARAFLEALPRHRWAIVTSAPRRLAERR HHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCEEEEEHHHHHHHHHH LAAAGMPVPDLLVAAEDVARGKPAPDCFLLAAGRLGVAAADCLVFEDAPAGIRAAEAADA HHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHEEEECCCCCCCCHHCCCCC AVVVVTATHHEPVRTNHPTIADYTGLRVAAAAEGIRVTQTA EEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]