| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gsiB [H]
Identifier: 170749646
GI number: 170749646
Start: 3435796
End: 3437325
Strand: Reverse
Name: gsiB [H]
Synonym: Mrad2831_3243
Alternate gene names: 170749646
Gene position: 3437325-3435796 (Counterclockwise)
Preceding gene: 170749647
Following gene: 170749645
Centisome position: 56.56
GC content: 66.54
Gene sequence:
>1530_bases ATGTTCGAGCGCTTCCTCCTCGCCGCCGGCCTGCTCGCCGTGGCGGCCGCGCCCGCCGCCGCGGCGGGCGACCCGATCCT GGCGATCAGCGGCCAGCCCGAGACTCTCGACCCGTACAACACGAACACCACGCTCACGACCGCCGTCACCAAGTCGTTCT ACGAGGGCCTCTTCGGCTTCGACAAGGACCTGAAGGTCCGCAACGTCCTGGCCGAGAGCTACGAGACCTCGCCCGACGGC CTGGTCTACACGTTCAAGCTGCGCGAGGGCGTCAAATTCCACGACGGCACGACGTTCGACGCCGCTGCGGTGAAGGCCAA TCTCGACCGCGTCCTCGACCCGGAGAACCACCTCGCGCGGTACAACCAGTTCAACCGCATCAAGACGATCGAGGTGCTCT CGCCCACGAGCCTGCGCATCACCCTGAAGGAGCCCTTCGGGCCGTTCATCAACTCGCTGGCCCACGCCTCGGCGGCGATC ATCTCGCCCACGGCCCTGAAGAAGTACGGCAAGGACATCGCCTTCCACCCGGTCGGCACCGGGCCGTTCACCTTCGTCGA CTGGAAGCAGACCGACTACGTCAAGGGCGCGAAGTTTGCCGATTATTGGCAGGCCGGCTTCCCGAAGGTCGACACCATCA CGTGGAAGCCGGTGCCCGAGAACGGCACACGCGCCGCCATGCTGCAGACCGGAGAGGCCGACTTCGCCTTCCCGCTGCCG TACGAGCAGGCCAAGATGCTCGAATCCAACAAGAAGCTGAAGATCGAGGTCCACGCCTCGATCATCGAGCGGTATCTCAG CATGAACGTGCTGCAGAAGCCGTTCGACGACCTGCGCGTCCGCCAGGCGATCAACTACGCGATCAACAAGGAGGCGTTGG CCAAGGTCGCCTTCTCGGGCTACGCCTTCCCCGCCCAGGGCATCGTCCCGCAGGGCGTGCTCTACGCCCACAAGATGGAT CCGTGGCCCTACGATCCGGCCAAGGCGCGCCAGCTCCTGAAGGAGGCCGGCTACGCGAACGGCTTCGAGGCGACCCTCTG GAGCGCCTACACCACCACCACCGCCCAGAAGGCGATCCAGTTCCTCCAGCAGCAGCTCGGGCAGGTCGGCATCAAGGTCC AGACCCTGGCCCTGGAGCCCGGCCAGCGCACCGAGTGGGTGCAGACCGCTCCGGATCCGAAGACCGCCCGCGTCCGCCTC TACTATGCCGGCTGGTCGTCCTCGACCGGCGAGGCCGATTGGGGCCTGCGGCCGCTGCTGGCGACGGAGGCCTGGCCGCC CAAGCTCAACAACACCGCCTATTACAGCAACGCCGAGTTCGACGCCCTCCTCGCCAGGGCGCTGGTCTCAACGAACGACG CGGAGCGGGCCGAACTCTACGCCAAGGCCCAGGAGATCGTGATGAAGGACGCGCCCTGGGCGCCGCTGGTCACCGAGCAG AACCTCTACGCGACCTCCGCGCGGCTTTCCGGCGTGTACGTCATGCCCGACGGCAACATCGATTCCGGCGAAATCGCCGT CGCTCAGTAG
Upstream 100 bases:
>100_bases GGCCCCGGCCATCTCGTCGCCCGCCACACCGTCGGCGGCCTCGCCGCCTGATATTGCCTATCCCCGCCAGCAGGATCGTC CCATGCCCCGAGGTCTGACC
Downstream 100 bases:
>100_bases CCGCCGATCGCGGCCCCTGCGCCGGGCGGCCCGATCGATGGCCGGCCCGGCGCGGCGCTCCCGCGCGATCGCCTCACGGA AACCCCGGATCCCGGGCGCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MFERFLLAAGLLAVAAAPAAAAGDPILAISGQPETLDPYNTNTTLTTAVTKSFYEGLFGFDKDLKVRNVLAESYETSPDG LVYTFKLREGVKFHDGTTFDAAAVKANLDRVLDPENHLARYNQFNRIKTIEVLSPTSLRITLKEPFGPFINSLAHASAAI ISPTALKKYGKDIAFHPVGTGPFTFVDWKQTDYVKGAKFADYWQAGFPKVDTITWKPVPENGTRAAMLQTGEADFAFPLP YEQAKMLESNKKLKIEVHASIIERYLSMNVLQKPFDDLRVRQAINYAINKEALAKVAFSGYAFPAQGIVPQGVLYAHKMD PWPYDPAKARQLLKEAGYANGFEATLWSAYTTTTAQKAIQFLQQQLGQVGIKVQTLALEPGQRTEWVQTAPDPKTARVRL YYAGWSSSTGEADWGLRPLLATEAWPPKLNNTAYYSNAEFDALLARALVSTNDAERAELYAKAQEIVMKDAPWAPLVTEQ NLYATSARLSGVYVMPDGNIDSGEIAVAQ
Sequences:
>Translated_509_residues MFERFLLAAGLLAVAAAPAAAAGDPILAISGQPETLDPYNTNTTLTTAVTKSFYEGLFGFDKDLKVRNVLAESYETSPDG LVYTFKLREGVKFHDGTTFDAAAVKANLDRVLDPENHLARYNQFNRIKTIEVLSPTSLRITLKEPFGPFINSLAHASAAI ISPTALKKYGKDIAFHPVGTGPFTFVDWKQTDYVKGAKFADYWQAGFPKVDTITWKPVPENGTRAAMLQTGEADFAFPLP YEQAKMLESNKKLKIEVHASIIERYLSMNVLQKPFDDLRVRQAINYAINKEALAKVAFSGYAFPAQGIVPQGVLYAHKMD PWPYDPAKARQLLKEAGYANGFEATLWSAYTTTTAQKAIQFLQQQLGQVGIKVQTLALEPGQRTEWVQTAPDPKTARVRL YYAGWSSSTGEADWGLRPLLATEAWPPKLNNTAYYSNAEFDALLARALVSTNDAERAELYAKAQEIVMKDAPWAPLVTEQ NLYATSARLSGVYVMPDGNIDSGEIAVAQ >Mature_509_residues MFERFLLAAGLLAVAAAPAAAAGDPILAISGQPETLDPYNTNTTLTTAVTKSFYEGLFGFDKDLKVRNVLAESYETSPDG LVYTFKLREGVKFHDGTTFDAAAVKANLDRVLDPENHLARYNQFNRIKTIEVLSPTSLRITLKEPFGPFINSLAHASAAI ISPTALKKYGKDIAFHPVGTGPFTFVDWKQTDYVKGAKFADYWQAGFPKVDTITWKPVPENGTRAAMLQTGEADFAFPLP YEQAKMLESNKKLKIEVHASIIERYLSMNVLQKPFDDLRVRQAINYAINKEALAKVAFSGYAFPAQGIVPQGVLYAHKMD PWPYDPAKARQLLKEAGYANGFEATLWSAYTTTTAQKAIQFLQQQLGQVGIKVQTLALEPGQRTEWVQTAPDPKTARVRL YYAGWSSSTGEADWGLRPLLATEAWPPKLNNTAYYSNAEFDALLARALVSTNDAERAELYAKAQEIVMKDAPWAPLVTEQ NLYATSARLSGVYVMPDGNIDSGEIAVAQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=493, Percent_Identity=58.0121703853955, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI1789966, Length=523, Percent_Identity=28.6806883365201, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1787551, Length=538, Percent_Identity=26.9516728624535, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1789887, Length=345, Percent_Identity=30.7246376811594, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1787495, Length=533, Percent_Identity=24.577861163227, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1787762, Length=530, Percent_Identity=25.8490566037736, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1789397, Length=471, Percent_Identity=22.0806794055202, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87081878, Length=476, Percent_Identity=20.7983193277311, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56117; Mature: 56117
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS01040 SBP_BACTERIAL_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERFLLAAGLLAVAAAPAAAAGDPILAISGQPETLDPYNTNTTLTTAVTKSFYEGLFGF CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHCC DKDLKVRNVLAESYETSPDGLVYTFKLREGVKFHDGTTFDAAAVKANLDRVLDPENHLAR CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCHHHHHH YNQFNRIKTIEVLSPTSLRITLKEPFGPFINSLAHASAAIISPTALKKYGKDIAFHPVGT HHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCC GPFTFVDWKQTDYVKGAKFADYWQAGFPKVDTITWKPVPENGTRAAMLQTGEADFAFPLP CCEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCEECCCC YEQAKMLESNKKLKIEVHASIIERYLSMNVLQKPFDDLRVRQAINYAINKEALAKVAFSG HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCC YAFPAQGIVPQGVLYAHKMDPWPYDPAKARQLLKEAGYANGFEATLWSAYTTTTAQKAIQ CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FLQQQLGQVGIKVQTLALEPGQRTEWVQTAPDPKTARVRLYYAGWSSSTGEADWGLRPLL HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH ATEAWPPKLNNTAYYSNAEFDALLARALVSTNDAERAELYAKAQEIVMKDAPWAPLVTEQ HCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECC NLYATSARLSGVYVMPDGNIDSGEIAVAQ CCEEEHHHCCEEEEEECCCCCCCCEEEEC >Mature Secondary Structure MFERFLLAAGLLAVAAAPAAAAGDPILAISGQPETLDPYNTNTTLTTAVTKSFYEGLFGF CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHCC DKDLKVRNVLAESYETSPDGLVYTFKLREGVKFHDGTTFDAAAVKANLDRVLDPENHLAR CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCHHHHHH YNQFNRIKTIEVLSPTSLRITLKEPFGPFINSLAHASAAIISPTALKKYGKDIAFHPVGT HHHCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCC GPFTFVDWKQTDYVKGAKFADYWQAGFPKVDTITWKPVPENGTRAAMLQTGEADFAFPLP CCEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCEECCCC YEQAKMLESNKKLKIEVHASIIERYLSMNVLQKPFDDLRVRQAINYAINKEALAKVAFSG HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCC YAFPAQGIVPQGVLYAHKMDPWPYDPAKARQLLKEAGYANGFEATLWSAYTTTTAQKAIQ CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FLQQQLGQVGIKVQTLALEPGQRTEWVQTAPDPKTARVRLYYAGWSSSTGEADWGLRPLL HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHH ATEAWPPKLNNTAYYSNAEFDALLARALVSTNDAERAELYAKAQEIVMKDAPWAPLVTEQ HCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECC NLYATSARLSGVYVMPDGNIDSGEIAVAQ CCEEEHHHCCEEEEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA