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The map label for this gene is yfdE [H]

Identifier: 170749321

GI number: 170749321

Start: 3071119

End: 3072339

Strand: Reverse

Name: yfdE [H]

Synonym: Mrad2831_2914

Alternate gene names: 170749321

Gene position: 3072339-3071119 (Counterclockwise)

Preceding gene: 170749322

Following gene: 170749320

Centisome position: 50.55

GC content: 72.56

Gene sequence:

>1221_bases
ATGGCGGAAACGATGAAGCGGTCGGGCCCGCTCGCCGGGATGCGGGTGATCGAGCTCGCCCACATCATGGCCGGGCCGGT
CTGCGGGTTGATGCTCGCCGACATGGGCGCGGAGGTGATCAAGGTCGAGAAGATGGAGGGCGACGACACCCGTCGCACCG
TCCCGCCCGCCCTCGAGGGCGAGAGCGCCGCCTACATGATGATGAACCGCGGCAAGCGCGGCATCAGCCTCGACCTGAAG
GATCCGGACGGCGTCGCGGTCCTGCGCCGCCTGCTCAAGGGCGCGGACGCCCTGATCGAGAACTACCGCGGCGGCACGAT
GGAGCGCCTCGGGATCGGGTACGAGACCCTGAAGGTCGAGTTCCCCGAGCTGGTCTACTGCTCGCTCTCCGGCTTCGGCC
GCACCGGTCCCTACGCCGACCGGGCCGGATTCGACCTCGTGGCGCAGGGCATGAGCGGCCTCATGTCGGTGACCGGGGAG
GGCCCCGGGCGACCGCCGATGAAGTGCGGGCCGCCGGTCACCGACATCACCGCCGGCATCCTGGCCGCCATGGGCGTCCT
GGCCGCCTACGCGAACCGGCTCCGGACGGGCCGGGGGCAGGCGGTCGACACGTCGCTGTTCGAGGCCGGCATCACCCACA
CCTACTGGCAGTCGGCCATCGCCATGGCGACCGGGATCGCGCCCGGCCCGATGGGCTCGGCCCATCCGCTGAACGCCCCC
TACGAGGCCTTCGAGACCGCCGACGGCTGGATCACGATCGGCGCGGCCAACCAGACCAACTGGCTGCGCCTGCTCAAGGC
CATCGGCGCCGACGACCTCGCCGAGGACCCGCGCTTCGCGCTCAACCGCGACCGGATGGCCAACCGGCACGACCTCGCCG
CGACCCTCGCGCCGATCTTCCGGGCCCACAGCTCGGCCGAGTGGCTCGCCCGGCTCGAGGCCGGCGGCGTGCCGGCCGGA
CCGGTCCTCGACGTGAACGCGATGCACCGCGACCCGCAGGCGCTCGCCCGCGAGATGGTGGTCGAGGTGGATCACCCGCG
GGTCGGGCGCATGAAGACCCTGGGCCTGCCGGTGAAGTTCTCCGAGACGCCGGGACGCGTGCATGGGCCGGCCCCGTTGC
TCGGCGAGCATTCCCGGGCGATCCTGGCCGAGGCCGGGTACGCGCCGGCCGAGATCGACGCGCTGATCGCGCGGGGCGTG
GTCCGCGAGACCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCGCTGGCCTTCACCATGCACCCCGAGCGGGAGTTCGTGGATCCCGTCACGCCGCCGGTCGCCCCCGCGGCCACCGTGC
CGGCCGGGGAGTAGGGCGCG

Downstream 100 bases:

>100_bases
CGCCGCCACCCGGAGACGCCGCGCATGACCGCCAAGCCCGCGACCGACGAGCTGCTGTTCACCATCGACGAGGCCGGCAT
CGCCCGCATCGTCCTGAACC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAETMKRSGPLAGMRVIELAHIMAGPVCGLMLADMGAEVIKVEKMEGDDTRRTVPPALEGESAAYMMMNRGKRGISLDLK
DPDGVAVLRRLLKGADALIENYRGGTMERLGIGYETLKVEFPELVYCSLSGFGRTGPYADRAGFDLVAQGMSGLMSVTGE
GPGRPPMKCGPPVTDITAGILAAMGVLAAYANRLRTGRGQAVDTSLFEAGITHTYWQSAIAMATGIAPGPMGSAHPLNAP
YEAFETADGWITIGAANQTNWLRLLKAIGADDLAEDPRFALNRDRMANRHDLAATLAPIFRAHSSAEWLARLEAGGVPAG
PVLDVNAMHRDPQALAREMVVEVDHPRVGRMKTLGLPVKFSETPGRVHGPAPLLGEHSRAILAEAGYAPAEIDALIARGV
VRETAA

Sequences:

>Translated_406_residues
MAETMKRSGPLAGMRVIELAHIMAGPVCGLMLADMGAEVIKVEKMEGDDTRRTVPPALEGESAAYMMMNRGKRGISLDLK
DPDGVAVLRRLLKGADALIENYRGGTMERLGIGYETLKVEFPELVYCSLSGFGRTGPYADRAGFDLVAQGMSGLMSVTGE
GPGRPPMKCGPPVTDITAGILAAMGVLAAYANRLRTGRGQAVDTSLFEAGITHTYWQSAIAMATGIAPGPMGSAHPLNAP
YEAFETADGWITIGAANQTNWLRLLKAIGADDLAEDPRFALNRDRMANRHDLAATLAPIFRAHSSAEWLARLEAGGVPAG
PVLDVNAMHRDPQALAREMVVEVDHPRVGRMKTLGLPVKFSETPGRVHGPAPLLGEHSRAILAEAGYAPAEIDALIARGV
VRETAA
>Mature_405_residues
AETMKRSGPLAGMRVIELAHIMAGPVCGLMLADMGAEVIKVEKMEGDDTRRTVPPALEGESAAYMMMNRGKRGISLDLKD
PDGVAVLRRLLKGADALIENYRGGTMERLGIGYETLKVEFPELVYCSLSGFGRTGPYADRAGFDLVAQGMSGLMSVTGEG
PGRPPMKCGPPVTDITAGILAAMGVLAAYANRLRTGRGQAVDTSLFEAGITHTYWQSAIAMATGIAPGPMGSAHPLNAPY
EAFETADGWITIGAANQTNWLRLLKAIGADDLAEDPRFALNRDRMANRHDLAATLAPIFRAHSSAEWLARLEAGGVPAGP
VLDVNAMHRDPQALAREMVVEVDHPRVGRMKTLGLPVKFSETPGRVHGPAPLLGEHSRAILAEAGYAPAEIDALIARGVV
RETAA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=401, Percent_Identity=34.9127182044888, Blast_Score=268, Evalue=5e-72,
Organism=Homo sapiens, GI300863124, Length=427, Percent_Identity=32.7868852459016, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI300863126, Length=401, Percent_Identity=33.1670822942643, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI13376042, Length=427, Percent_Identity=30.2107728337237, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI266456254, Length=410, Percent_Identity=29.7560975609756, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI42794625, Length=405, Percent_Identity=29.8765432098765, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI266458393, Length=265, Percent_Identity=34.3396226415094, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI266458397, Length=259, Percent_Identity=33.5907335907336, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI42822893, Length=143, Percent_Identity=41.2587412587413, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI266458395, Length=143, Percent_Identity=41.2587412587413, Blast_Score=108, Evalue=7e-24,
Organism=Escherichia coli, GI87082093, Length=357, Percent_Identity=37.5350140056022, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1788717, Length=411, Percent_Identity=30.1703163017032, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1786222, Length=409, Percent_Identity=26.8948655256724, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI32564160, Length=351, Percent_Identity=27.0655270655271, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI115535051, Length=349, Percent_Identity=26.3610315186246, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24648431, Length=397, Percent_Identity=38.2871536523929, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI24585488, Length=408, Percent_Identity=29.4117647058824, Blast_Score=139, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43112; Mature: 42981

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETMKRSGPLAGMRVIELAHIMAGPVCGLMLADMGAEVIKVEKMEGDDTRRTVPPALEG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
ESAAYMMMNRGKRGISLDLKDPDGVAVLRRLLKGADALIENYRGGTMERLGIGYETLKVE
CCCEEHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEE
FPELVYCSLSGFGRTGPYADRAGFDLVAQGMSGLMSVTGEGPGRPPMKCGPPVTDITAGI
CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHH
LAAMGVLAAYANRLRTGRGQAVDTSLFEAGITHTYWQSAIAMATGIAPGPMGSAHPLNAP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEAFETADGWITIGAANQTNWLRLLKAIGADDLAEDPRFALNRDRMANRHDLAATLAPIF
HHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHHH
RAHSSAEWLARLEAGGVPAGPVLDVNAMHRDPQALAREMVVEVDHPRVGRMKTLGLPVKF
HHCCCHHHHHHHHCCCCCCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEE
SETPGRVHGPAPLLGEHSRAILAEAGYAPAEIDALIARGVVRETAA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AETMKRSGPLAGMRVIELAHIMAGPVCGLMLADMGAEVIKVEKMEGDDTRRTVPPALEG
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
ESAAYMMMNRGKRGISLDLKDPDGVAVLRRLLKGADALIENYRGGTMERLGIGYETLKVE
CCCEEHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEE
FPELVYCSLSGFGRTGPYADRAGFDLVAQGMSGLMSVTGEGPGRPPMKCGPPVTDITAGI
CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHH
LAAMGVLAAYANRLRTGRGQAVDTSLFEAGITHTYWQSAIAMATGIAPGPMGSAHPLNAP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEAFETADGWITIGAANQTNWLRLLKAIGADDLAEDPRFALNRDRMANRHDLAATLAPIF
HHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHHH
RAHSSAEWLARLEAGGVPAGPVLDVNAMHRDPQALAREMVVEVDHPRVGRMKTLGLPVKF
HHCCCHHHHHHHHCCCCCCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEE
SETPGRVHGPAPLLGEHSRAILAEAGYAPAEIDALIARGVVRETAA
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]