| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rcp1 [H]
Identifier: 170749192
GI number: 170749192
Start: 2923957
End: 2924409
Strand: Reverse
Name: rcp1 [H]
Synonym: Mrad2831_2785
Alternate gene names: 170749192
Gene position: 2924409-2923957 (Counterclockwise)
Preceding gene: 170749193
Following gene: 170749191
Centisome position: 48.12
GC content: 65.34
Gene sequence:
>453_bases ATGAGCGTGGAGCCGCCCGTGCACCCCGTCAGCATCGTGATGATCGAGGATGACGAGGGACATGCGCGCCTGATCGAGCG GAACATTCGCCGCGCCGGCGTCAACAACGACATCGTGCAGTTCCGGAACGGCACGTCGGCGCTGGACTATCTGCTCGGCG CGGACGGCTCCGGCGAGGCGAGCGCCCGACGTCACCTGCTGATCCTGCTCGATCTCAACCTGCCGGACATGACCGGCCTC GACATCCTCGAGAAGGTCAAGGCGAACCCGCACACGCGGCGGTCACCGGTGGTGGTGCTGACCACGACGGACGACAGCCG CGAGATCCAGCGCTGCTACGATCTCGGGGCCAACGTCTACATCACCAAGCCGGTGAGCTACGACGGCTTCGCGAACGCGA TCCGCCAGCTCGGGCTGTTCTTCTCGGTCATGCAGGTTCCGCAGAACCCATGA
Upstream 100 bases:
>100_bases GTTCAGAACTCGGCGTCGGCACGACGTTCGACGTGACCTTGCCGCGCGGGACAGCTACAGCGGTCCGGTTAGACCCTGAA CCGGCGCCCATCGCCGCCGA
Downstream 100 bases:
>100_bases GTGCCGGGCGTGCCAGCGTGGGCGGCACCGCTGCGGCGGCACGCATCCTCTACATCGACGACGATCCCGGCCTCGGCCGC CTGGTCCGGCGCGCCCTGGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSVEPPVHPVSIVMIEDDEGHARLIERNIRRAGVNNDIVQFRNGTSALDYLLGADGSGEASARRHLLILLDLNLPDMTGL DILEKVKANPHTRRSPVVVLTTTDDSREIQRCYDLGANVYITKPVSYDGFANAIRQLGLFFSVMQVPQNP
Sequences:
>Translated_150_residues MSVEPPVHPVSIVMIEDDEGHARLIERNIRRAGVNNDIVQFRNGTSALDYLLGADGSGEASARRHLLILLDLNLPDMTGL DILEKVKANPHTRRSPVVVLTTTDDSREIQRCYDLGANVYITKPVSYDGFANAIRQLGLFFSVMQVPQNP >Mature_149_residues SVEPPVHPVSIVMIEDDEGHARLIERNIRRAGVNNDIVQFRNGTSALDYLLGADGSGEASARRHLLILLDLNLPDMTGLD ILEKVKANPHTRRSPVVVLTTTDDSREIQRCYDLGANVYITKPVSYDGFANAIRQLGLFFSVMQVPQNP
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16624; Mature: 16493
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEPPVHPVSIVMIEDDEGHARLIERNIRRAGVNNDIVQFRNGTSALDYLLGADGSGEA CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCC SARRHLLILLDLNLPDMTGLDILEKVKANPHTRRSPVVVLTTTDDSREIQRCYDLGANVY CCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEE ITKPVSYDGFANAIRQLGLFFSVMQVPQNP EECCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVEPPVHPVSIVMIEDDEGHARLIERNIRRAGVNNDIVQFRNGTSALDYLLGADGSGEA CCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCC SARRHLLILLDLNLPDMTGLDILEKVKANPHTRRSPVVVLTTTDDSREIQRCYDLGANVY CCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEE ITKPVSYDGFANAIRQLGLFFSVMQVPQNP EECCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]