| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rprY [H]
Identifier: 170749191
GI number: 170749191
Start: 2922896
End: 2923960
Strand: Reverse
Name: rprY [H]
Synonym: Mrad2831_2784
Alternate gene names: 170749191
Gene position: 2923960-2922896 (Counterclockwise)
Preceding gene: 170749192
Following gene: 170749189
Centisome position: 48.11
GC content: 73.99
Gene sequence:
>1065_bases ATGAGTGCCGGGCGTGCCAGCGTGGGCGGCACCGCTGCGGCGGCACGCATCCTCTACATCGACGACGATCCCGGCCTCGG CCGCCTGGTCCGGCGCGCCCTGGAGGCGCGCGGCTACGCCGTCGAGCTCTGTCCCGACGGTGCCGCGGGGCTGGCGCGAC TGGCGCAGGGCGGGATCGACGCCGTCGCCCTCGACCACCACATGCCCGGGCAGACGGGCCTCGACCTGCTGCCGGAGATC CGCGCGCTGCCCGAGGCGCCGCCGGTCATCTACGTGACCGGTTCCGAGGACAGCCGCGTCGCCGTGGCGGCCCTGAAGGC GGGGGCGGTGGACTACGTCTGGAAGGACGTCCAGGGGCAGTTCCGGGAGCTGCTCGGCGAGGCCGTCGCCACCGCCCTCC GGCAGGAGAGCCTGCGGCGCGACAAGGAGCGGGCCGAGGCCGAGATGCGCGAGGCGCGCGACCGCGCCGAGCTGCTGCTG CGCGAGGTCAATCACCGCGTGGCCAACTCCCTGGCCCTCGTCGCCGCCCTGGCGCACATGCAGCGCAACGCCGTCACGGA TCCGGCCGCCAAGGCGGCGCTCGACGAGATGCAGGCCCGGATCTCGGCGATCGCCGGCATCCACCGGCGCCTCTACACCT CGGACGACGTCGAGTCCGTCGAGCTCGACGCCTACCTGCAGAGCCTCGTCGAGGAATTGCAGGCCGCCATGCGGGCGAGC GGGCGGGACCACGCGATCCGCCTCCGGGCCGAGCCGGTGCGGCTCTCGACCGACAAGGCTGTCTCGGTCGGCGTGGTCGT GACCGAGCTCGTCACCAACGCTTACAAGTACGCCTACCCGGTCGGCACCTCGGGCGAGATCCGCGTGGCGGTCGAGCGGG ACGCCGCCGACACCGTGCTGCTCGCCGTCGAGGACGACGGCATCGGCTGGACCGGGGAGGGCGAGATCCGCGGCACCGGG CTCGGGTCGCGCATCGTGCGCGCCATGGCGTCGAACCTGCGCTCGGCCCTCTCGTACGCCCCCGGCCGTCCCGGCACCCG GGCGATCCTGGCGTTCCAAGCCTGA
Upstream 100 bases:
>100_bases CCAACGTCTACATCACCAAGCCGGTGAGCTACGACGGCTTCGCGAACGCGATCCGCCAGCTCGGGCTGTTCTTCTCGGTC ATGCAGGTTCCGCAGAACCC
Downstream 100 bases:
>100_bases GCCCGAGGATGAGCGTCGGGCTCTAGCCGCCCGCTCGCCCGGCGATGCGGTCGAGCGCGTCGAGCATCGGCGCCAGGGTG TCCTCGTCGAGTTGCTGGAA
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSAGRASVGGTAAAARILYIDDDPGLGRLVRRALEARGYAVELCPDGAAGLARLAQGGIDAVALDHHMPGQTGLDLLPEI RALPEAPPVIYVTGSEDSRVAVAALKAGAVDYVWKDVQGQFRELLGEAVATALRQESLRRDKERAEAEMREARDRAELLL REVNHRVANSLALVAALAHMQRNAVTDPAAKAALDEMQARISAIAGIHRRLYTSDDVESVELDAYLQSLVEELQAAMRAS GRDHAIRLRAEPVRLSTDKAVSVGVVVTELVTNAYKYAYPVGTSGEIRVAVERDAADTVLLAVEDDGIGWTGEGEIRGTG LGSRIVRAMASNLRSALSYAPGRPGTRAILAFQA
Sequences:
>Translated_354_residues MSAGRASVGGTAAAARILYIDDDPGLGRLVRRALEARGYAVELCPDGAAGLARLAQGGIDAVALDHHMPGQTGLDLLPEI RALPEAPPVIYVTGSEDSRVAVAALKAGAVDYVWKDVQGQFRELLGEAVATALRQESLRRDKERAEAEMREARDRAELLL REVNHRVANSLALVAALAHMQRNAVTDPAAKAALDEMQARISAIAGIHRRLYTSDDVESVELDAYLQSLVEELQAAMRAS GRDHAIRLRAEPVRLSTDKAVSVGVVVTELVTNAYKYAYPVGTSGEIRVAVERDAADTVLLAVEDDGIGWTGEGEIRGTG LGSRIVRAMASNLRSALSYAPGRPGTRAILAFQA >Mature_353_residues SAGRASVGGTAAAARILYIDDDPGLGRLVRRALEARGYAVELCPDGAAGLARLAQGGIDAVALDHHMPGQTGLDLLPEIR ALPEAPPVIYVTGSEDSRVAVAALKAGAVDYVWKDVQGQFRELLGEAVATALRQESLRRDKERAEAEMREARDRAELLLR EVNHRVANSLALVAALAHMQRNAVTDPAAKAALDEMQARISAIAGIHRRLYTSDDVESVELDAYLQSLVEELQAAMRASG RDHAIRLRAEPVRLSTDKAVSVGVVVTELVTNAYKYAYPVGTSGEIRVAVERDAADTVLLAVEDDGIGWTGEGEIRGTGL GSRIVRAMASNLRSALSYAPGRPGTRAILAFQA
Specific function: Member of the two-component regulatory system rprX/rprY [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 37732; Mature: 37601
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGRASVGGTAAAARILYIDDDPGLGRLVRRALEARGYAVELCPDGAAGLARLAQGGID CCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC AVALDHHMPGQTGLDLLPEIRALPEAPPVIYVTGSEDSRVAVAALKAGAVDYVWKDVQGQ EEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHCCCHHHHHHHHHHH FRELLGEAVATALRQESLRRDKERAEAEMREARDRAELLLREVNHRVANSLALVAALAHM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRNAVTDPAAKAALDEMQARISAIAGIHRRLYTSDDVESVELDAYLQSLVEELQAAMRAS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GRDHAIRLRAEPVRLSTDKAVSVGVVVTELVTNAYKYAYPVGTSGEIRVAVERDAADTVL CCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEE LAVEDDGIGWTGEGEIRGTGLGSRIVRAMASNLRSALSYAPGRPGTRAILAFQA EEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC >Mature Secondary Structure SAGRASVGGTAAAARILYIDDDPGLGRLVRRALEARGYAVELCPDGAAGLARLAQGGID CCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC AVALDHHMPGQTGLDLLPEIRALPEAPPVIYVTGSEDSRVAVAALKAGAVDYVWKDVQGQ EEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHCCCHHHHHHHHHHH FRELLGEAVATALRQESLRRDKERAEAEMREARDRAELLLREVNHRVANSLALVAALAHM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRNAVTDPAAKAALDEMQARISAIAGIHRRLYTSDDVESVELDAYLQSLVEELQAAMRAS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GRDHAIRLRAEPVRLSTDKAVSVGVVVTELVTNAYKYAYPVGTSGEIRVAVERDAADTVL CCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEE LAVEDDGIGWTGEGEIRGTGLGSRIVRAMASNLRSALSYAPGRPGTRAILAFQA EEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]