| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is tyrC [H]
Identifier: 170748292
GI number: 170748292
Start: 2002338
End: 2003279
Strand: Reverse
Name: tyrC [H]
Synonym: Mrad2831_1874
Alternate gene names: 170748292
Gene position: 2003279-2002338 (Counterclockwise)
Preceding gene: 170748293
Following gene: 170748290
Centisome position: 32.96
GC content: 73.99
Gene sequence:
>942_bases ATGGCTGAGACATCCGAGGGCGTCCCCGCGATCGACCGCCTCGCCATCGTCGGCCTCGGGCTGATCGGCTCCTCGATCGC CCGGGCGGCGCGGCGCTACGGCCTCGCCCGCACCATCGTGGCGGTGGACCGGGACGAGGCCGTGCGCGCCCGGGTGCGCG ACCTCGGCATCGCCGACGTCGTCACGGGCGACCCGGCGGAGGGGGCCGCCGGCACCGACCTCGCGATCCTGTGCGTGCCG GTGGGCGCCATCGGGGCGGCGGCGGCCGAGATGGCGCCTTACCTCAAGCCCGGCGCGATCGTGTCGGATGTCGGTTCGGT GAAGGGTGCCGTGGTGGCGGCGGTCCGGCCGCACCTGCCCGACGGCGTCGCGCTGGTCCCCGGCCACCCGATCGCCGGCA CCGAGTTCTCGGGCCCGGACGCGGGCTTCGCGACCCTGTTCCAGGGCCGCTGGTGCATCCTGACCCCGCCCGAGGGCACC GACCCGGCCGCGATCGAGACCGTCCGCGCCCTGTGGGCGGGGATGGGCGCCGACGTCGAGACGATGAGCGCCGAGCACCA CGACCACGTGCTCGCCATCACCAGCCACCTGCCGCACCTGATCGCCTACAACATCGTGGGCACCGCGGCCGACCTCGAAT CGGCGACGCAGTCCGAGGTGATCAAGTTCTCGGCGAGCGGGTTCCGCGACTTCACCCGCATCGCGGCGTCGGACCCGACC ATGTGGCGGGACATCTTCCTCAACAACCGCGACGCGGTGCTGGAGATGCTCGGCCGGTTCAACGAGGACCTGTCGGCGCT CGCCAAGGCGGTGCGCTGGGGCGACGGCGACGCGCTCCACGCGATGTTCACCCGCACCCGGGCGATCCGGCGCAGCATCG TGGCGCAGGGCCAGGAGACCGCGGCCCCGGATTTCGGCCGGCCGCGGCCGCCGGAGGAGTAG
Upstream 100 bases:
>100_bases ACCGCCTACGGCCTGCCCAACGCCCTGCGGGTGACGGTGGCGGGCGCCGAGGCGAACGAAGCCTTCCTGGCGGCGCTCGG CGACTTCGTGCGGGGCCACC
Downstream 100 bases:
>100_bases GGACCGCCGGCGCTCACGCCGGCGGGCGGTTGACCAGCACCGGCTGCGCCGCCGCCCGCTCCGGGAACAGGTGCTTCAGG GCTTCGAGCTTCGGCGCGTC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAETSEGVPAIDRLAIVGLGLIGSSIARAARRYGLARTIVAVDRDEAVRARVRDLGIADVVTGDPAEGAAGTDLAILCVP VGAIGAAAAEMAPYLKPGAIVSDVGSVKGAVVAAVRPHLPDGVALVPGHPIAGTEFSGPDAGFATLFQGRWCILTPPEGT DPAAIETVRALWAGMGADVETMSAEHHDHVLAITSHLPHLIAYNIVGTAADLESATQSEVIKFSASGFRDFTRIAASDPT MWRDIFLNNRDAVLEMLGRFNEDLSALAKAVRWGDGDALHAMFTRTRAIRRSIVAQGQETAAPDFGRPRPPEE
Sequences:
>Translated_313_residues MAETSEGVPAIDRLAIVGLGLIGSSIARAARRYGLARTIVAVDRDEAVRARVRDLGIADVVTGDPAEGAAGTDLAILCVP VGAIGAAAAEMAPYLKPGAIVSDVGSVKGAVVAAVRPHLPDGVALVPGHPIAGTEFSGPDAGFATLFQGRWCILTPPEGT DPAAIETVRALWAGMGADVETMSAEHHDHVLAITSHLPHLIAYNIVGTAADLESATQSEVIKFSASGFRDFTRIAASDPT MWRDIFLNNRDAVLEMLGRFNEDLSALAKAVRWGDGDALHAMFTRTRAIRRSIVAQGQETAAPDFGRPRPPEE >Mature_312_residues AETSEGVPAIDRLAIVGLGLIGSSIARAARRYGLARTIVAVDRDEAVRARVRDLGIADVVTGDPAEGAAGTDLAILCVPV GAIGAAAAEMAPYLKPGAIVSDVGSVKGAVVAAVRPHLPDGVALVPGHPIAGTEFSGPDAGFATLFQGRWCILTPPEGTD PAAIETVRALWAGMGADVETMSAEHHDHVLAITSHLPHLIAYNIVGTAADLESATQSEVIKFSASGFRDFTRIAASDPTM WRDIFLNNRDAVLEMLGRFNEDLSALAKAVRWGDGDALHAMFTRTRAIRRSIVAQGQETAAPDFGRPRPPEE
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 32797; Mature: 32665
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETSEGVPAIDRLAIVGLGLIGSSIARAARRYGLARTIVAVDRDEAVRARVRDLGIADV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCHHHHHHHHHHCCCHHE VTGDPAEGAAGTDLAILCVPVGAIGAAAAEMAPYLKPGAIVSDVGSVKGAVVAAVRPHLP ECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCC DGVALVPGHPIAGTEFSGPDAGFATLFQGRWCILTPPEGTDPAAIETVRALWAGMGADVE CCEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHH TMSAEHHDHVLAITSHLPHLIAYNIVGTAADLESATQSEVIKFSASGFRDFTRIAASDPT HHCCCCCCCEEEHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC MWRDIFLNNRDAVLEMLGRFNEDLSALAKAVRWGDGDALHAMFTRTRAIRRSIVAQGQET HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC AAPDFGRPRPPEE CCCCCCCCCCCCC >Mature Secondary Structure AETSEGVPAIDRLAIVGLGLIGSSIARAARRYGLARTIVAVDRDEAVRARVRDLGIADV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCHHHHHHHHHHCCCHHE VTGDPAEGAAGTDLAILCVPVGAIGAAAAEMAPYLKPGAIVSDVGSVKGAVVAAVRPHLP ECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCC DGVALVPGHPIAGTEFSGPDAGFATLFQGRWCILTPPEGTDPAAIETVRALWAGMGADVE CCEEEECCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHH TMSAEHHDHVLAITSHLPHLIAYNIVGTAADLESATQSEVIKFSASGFRDFTRIAASDPT HHCCCCCCCEEEHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC MWRDIFLNNRDAVLEMLGRFNEDLSALAKAVRWGDGDALHAMFTRTRAIRRSIVAQGQET HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC AAPDFGRPRPPEE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]