Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yjhH [H]

Identifier: 170747946

GI number: 170747946

Start: 1609791

End: 1610726

Strand: Reverse

Name: yjhH [H]

Synonym: Mrad2831_1528

Alternate gene names: 170747946

Gene position: 1610726-1609791 (Counterclockwise)

Preceding gene: 170747947

Following gene: 170747943

Centisome position: 26.5

GC content: 72.01

Gene sequence:

>936_bases
ATGCCTCTCACCAGCGACATCGGCGGCGTCGTCCCGATCGCGCCGACGCCGTTCCATCCGGACGGCCGGATCGACGAGGT
CTCCCTCGACCGGATGACCGACTTCTTCGGGGCGGCCGGCGTCGACGGCCTGACGATCCTCGGCCAGCTCGGCGAGGCCG
GCAAGCTCGACCACGCGGAGGGGATCGCGGTGGCGCGGCGCGTCCTCGGGCGCACCCGGCTGCCGGTGATCGTCGGCGTC
ACGGCGCCGGGCTTCGCGGCCATGCGGGCGCTCGCCCGGGAGGTGATGGAGCTGGGCGCGGCCGGCGTGATGATCGCGCC
GCCCAACACGCTCCGCACCGACGACCAGGTGGTCGGCTATTTTCGGAATGCCGCCGAGGCCGTGGGCCCGGACGTGCCCT
TCGTGCTTCAGGACTACCCCCTCACCTTCTCGGTCCAGATGACCCCCGGCGTGATCCGCCGGATCGTGTCCGAGAACCCC
TCCTGCGTGATGCTCAAGCACGAGGACTGGCCGGGCCTGGAGAAGATCTCCACGCTGCGCGGCTTCGAGGCGGACGGCTC
GATGCGCCACATCTCCATCCTCGTGGGCAATGGCGGCCTGTTCCTCGACTTCGAGACCGAGCGCGGCGCCGACGGGGCCA
ATACCGGCTACGCCTTCCCGGAGATGCTGGTCGACGTGGTCCGCCTCGGCCGGGCGGGGCAGCGCGACGCTGCCCACGAC
CTGTTCGACGCCCACCTCCCCTATCTCCGCTACGAGCAGCAGCAGGGCCCGCTGGGGCTCGCGGTGCGCAAATACGTGTT
CATGCGCCGGGGGATCTTCGCGTCCGACGCGCAGCGCAAGCCGTCGCAGGCGCTGACCGCGCAGGCGAAGGCCGAGGTCG
AGTACCTGCTGGCCCGCCTCGCCCGCACCGACGCGCGGGCCCGGCTCGCGGCCTAG

Upstream 100 bases:

>100_bases
CCGATCCCGTCCCGGGCGCGTCGCGTCGCCCGGGATTTTTTAGTATGGGGCATGCCACCCGGCGGCCGGCGGCCGCCGCA
GCAGCAGCGCGGAGACCGGC

Downstream 100 bases:

>100_bases
ACCGCCGCCCCGGCCGGAAGGGCCGGGGCCTCGCCGAAGCCGCCGCAGCGCCCGCTTCGGCGGCCGGCCGGCGCGCGACG
GCTCACTCCAGCCTGAAGGC

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGV
TAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENP
SCVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD
LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA

Sequences:

>Translated_311_residues
MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGV
TAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENP
SCVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD
LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA
>Mature_310_residues
PLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAEGIAVARRVLGRTRLPVIVGVT
APGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGYFRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPS
CVMLKHEDWPGLEKISTLRGFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHDL
FDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARLARTDARARLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=305, Percent_Identity=26.5573770491803, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786463, Length=240, Percent_Identity=24.5833333333333, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: NA

Molecular weight: Translated: 33580; Mature: 33449

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAE
CCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHH
GIAVARRVLGRTRLPVIVGVTAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGY
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
FRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPSCVMLKHEDWPGLEKISTLR
HHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHC
GFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD
CCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARL
HHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARTDARARLAA
HHHHHHHHCCC
>Mature Secondary Structure 
PLTSDIGGVVPIAPTPFHPDGRIDEVSLDRMTDFFGAAGVDGLTILGQLGEAGKLDHAE
CCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHH
GIAVARRVLGRTRLPVIVGVTAPGFAAMRALAREVMELGAAGVMIAPPNTLRTDDQVVGY
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
FRNAAEAVGPDVPFVLQDYPLTFSVQMTPGVIRRIVSENPSCVMLKHEDWPGLEKISTLR
HHHHHHHHCCCCCEEEECCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHC
GFEADGSMRHISILVGNGGLFLDFETERGADGANTGYAFPEMLVDVVRLGRAGQRDAAHD
CCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
LFDAHLPYLRYEQQQGPLGLAVRKYVFMRRGIFASDAQRKPSQALTAQAKAEVEYLLARL
HHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARTDARARLAA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]