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The map label for this gene is yodQ [H]

Identifier: 170747512

GI number: 170747512

Start: 1137875

End: 1139167

Strand: Reverse

Name: yodQ [H]

Synonym: Mrad2831_1080

Alternate gene names: 170747512

Gene position: 1139167-1137875 (Counterclockwise)

Preceding gene: 170747513

Following gene: 170747509

Centisome position: 18.74

GC content: 72.08

Gene sequence:

>1293_bases
ATGGCCCTCGACCCCACCCTCGCCGCCGAGATCGAAGCCTCCGTGGCGGAGGGCTTCGCCGATCAGGTCGCCCACACGCA
GGCGCTCGTCCGGTTCGCCTCCCTGCGCGGGGAGGAGCATGCCTGCCAGGATTACGTGTTCGAGCAGTTCCGCGCCCGCG
GCTACGCCACCGAGCGCTTCGCCATGGACCGCGGCGCCATCGCGGCCCATCCGGGCGGCTCGAAGATCGACGACGCGCAC
CACTCGGACGCGCCGATCGTCGTCTGCCACCACCGGCCGGGCACCGAGACCGGGCGCTCGCTGATCCTGCAGGCCCATGT
CGACGTGGTGCCGCCGGGTCCCCTCGACCTCTGGACCCATCGACCCTTCGACCCCGTGATCCAGGGCGACTGGATGTACG
GCCGCGGCGCCGGCGACATGAAGGCCGGCCACGCCGCCAACCTGTTCGCCCTCGACGCCCTGGCCCGGCTCGGCCTGCAG
CCGGCGGCCTCGGTGACGGTGCAGTCCGTGGTCGAGGAGGAATCCACCGGCAACGGCGCCCTGATGACCCACCTGCGCGG
CTACCGGGCCGACGCCGTGCTGATCCCCGAGCCCGAGGACGAGAAGCTCGTGCGCGCCAATACCGGCGTGCTGTGGTTCA
CCGTCGAGGTCCGGGGCGTGCCGGTCCACGTCCGCGAGATGGGCGCGGGCGCCAACGCCATCGACGCCACCTACCGGGTG
ATCGGCGCGCTGCGCGAGGTCGAGGCCCGCTGGAACGCCGAGAAGGCCGCGCACCCGCATTTCGAGACCGAGGACCACCC
GATCAACCTCAACATCGGCAAGATCGAGGGCGGCGACTGGGCCTCCTCGGTCCCGGCCTGGTGCCGGATCCACTGCCGGG
TCGCGCTCTACCCGGGCGTCACCGCCGCGCAGGCCGCCGCCGAGATCGAGGCCGCGGTGGCGTCCTTCTCCCGCACCGAC
CCGTTCCTGGCCAACAGCCCGCCGCGGGTGGTGTTCAACGGCTTCTTCGCCGAGGGCTACGTGCTGGAGGCGGGCTCGGA
GGCCGAGGCGGTGCTCGGCCGGGCCCACGAGCGGGCGATCGGATCGCCGCTCCAGAGCTTCATGACCGCGGGCTACCTCG
ATACCCGCGTCCACGCCCTCTACGACCGGGTGCCGGCCCTCTGCTACGGCCCGACCTCCCAGAACATCCACGGCTTCGAC
GAGCGCGTGAGCCTCGCCTCGGTGAAGCGGATCACGACCACCATGGCGCTGTTCGTGGCCGAGTGGTGCGGGACGGAGCG
CAAGGTCTCCTGA

Upstream 100 bases:

>100_bases
GGGCCTCGGTTCCGGCACGGACCGTGCCCTTGACAACCGCCGGTTGACAGCGGCCCGAGCCCGGGCGCTTCCTCCCGGCC
GCAGACGGTTCGGAGTTCCC

Downstream 100 bases:

>100_bases
TTCGCCGCCGTCTCTGCGAGCGCAGCGAAGCAATCCACGGCAGCGCTGCGCTCACGGGCGTCGTGCATCCCTGGGTCGCT
TCGCTGCGCTCGCGATGACC

Product: acetylornithine deacetylase

Products: acetate; L-ornithine

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MALDPTLAAEIEASVAEGFADQVAHTQALVRFASLRGEEHACQDYVFEQFRARGYATERFAMDRGAIAAHPGGSKIDDAH
HSDAPIVVCHHRPGTETGRSLILQAHVDVVPPGPLDLWTHRPFDPVIQGDWMYGRGAGDMKAGHAANLFALDALARLGLQ
PAASVTVQSVVEEESTGNGALMTHLRGYRADAVLIPEPEDEKLVRANTGVLWFTVEVRGVPVHVREMGAGANAIDATYRV
IGALREVEARWNAEKAAHPHFETEDHPINLNIGKIEGGDWASSVPAWCRIHCRVALYPGVTAAQAAAEIEAAVASFSRTD
PFLANSPPRVVFNGFFAEGYVLEAGSEAEAVLGRAHERAIGSPLQSFMTAGYLDTRVHALYDRVPALCYGPTSQNIHGFD
ERVSLASVKRITTTMALFVAEWCGTERKVS

Sequences:

>Translated_430_residues
MALDPTLAAEIEASVAEGFADQVAHTQALVRFASLRGEEHACQDYVFEQFRARGYATERFAMDRGAIAAHPGGSKIDDAH
HSDAPIVVCHHRPGTETGRSLILQAHVDVVPPGPLDLWTHRPFDPVIQGDWMYGRGAGDMKAGHAANLFALDALARLGLQ
PAASVTVQSVVEEESTGNGALMTHLRGYRADAVLIPEPEDEKLVRANTGVLWFTVEVRGVPVHVREMGAGANAIDATYRV
IGALREVEARWNAEKAAHPHFETEDHPINLNIGKIEGGDWASSVPAWCRIHCRVALYPGVTAAQAAAEIEAAVASFSRTD
PFLANSPPRVVFNGFFAEGYVLEAGSEAEAVLGRAHERAIGSPLQSFMTAGYLDTRVHALYDRVPALCYGPTSQNIHGFD
ERVSLASVKRITTTMALFVAEWCGTERKVS
>Mature_429_residues
ALDPTLAAEIEASVAEGFADQVAHTQALVRFASLRGEEHACQDYVFEQFRARGYATERFAMDRGAIAAHPGGSKIDDAHH
SDAPIVVCHHRPGTETGRSLILQAHVDVVPPGPLDLWTHRPFDPVIQGDWMYGRGAGDMKAGHAANLFALDALARLGLQP
AASVTVQSVVEEESTGNGALMTHLRGYRADAVLIPEPEDEKLVRANTGVLWFTVEVRGVPVHVREMGAGANAIDATYRVI
GALREVEARWNAEKAAHPHFETEDHPINLNIGKIEGGDWASSVPAWCRIHCRVALYPGVTAAQAAAEIEAAVASFSRTDP
FLANSPPRVVFNGFFAEGYVLEAGSEAEAVLGRAHERAIGSPLQSFMTAGYLDTRVHALYDRVPALCYGPTSQNIHGFDE
RVSLASVKRITTTMALFVAEWCGTERKVS

Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1790395, Length=225, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788816, Length=406, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789236, Length=155, Percent_Identity=27.741935483871, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010182
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.16

Molecular weight: Translated: 46486; Mature: 46355

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDPTLAAEIEASVAEGFADQVAHTQALVRFASLRGEEHACQDYVFEQFRARGYATERF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
AMDRGAIAAHPGGSKIDDAHHSDAPIVVCHHRPGTETGRSLILQAHVDVVPPGPLDLWTH
HHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEEEEEECCCCCCCCCCCCC
RPFDPVIQGDWMYGRGAGDMKAGHAANLFALDALARLGLQPAASVTVQSVVEEESTGNGA
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
LMTHLRGYRADAVLIPEPEDEKLVRANTGVLWFTVEVRGVPVHVREMGAGANAIDATYRV
EEHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEEEEECCEEEEECCCCCCCHHHHHHHH
IGALREVEARWNAEKAAHPHFETEDHPINLNIGKIEGGDWASSVPAWCRIHCRVALYPGV
HHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCC
TAAQAAAEIEAAVASFSRTDPFLANSPPRVVFNGFFAEGYVLEAGSEAEAVLGRAHERAI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH
GSPLQSFMTAGYLDTRVHALYDRVPALCYGPTSQNIHGFDERVSLASVKRITTTMALFVA
HHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EWCGTERKVS
HHCCCCCCCC
>Mature Secondary Structure 
ALDPTLAAEIEASVAEGFADQVAHTQALVRFASLRGEEHACQDYVFEQFRARGYATERF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
AMDRGAIAAHPGGSKIDDAHHSDAPIVVCHHRPGTETGRSLILQAHVDVVPPGPLDLWTH
HHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEEEEEECCCCCCCCCCCCC
RPFDPVIQGDWMYGRGAGDMKAGHAANLFALDALARLGLQPAASVTVQSVVEEESTGNGA
CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
LMTHLRGYRADAVLIPEPEDEKLVRANTGVLWFTVEVRGVPVHVREMGAGANAIDATYRV
EEHHHCCCCCCEEECCCCCCCCEEEECCCEEEEEEEEECCEEEEECCCCCCCHHHHHHHH
IGALREVEARWNAEKAAHPHFETEDHPINLNIGKIEGGDWASSVPAWCRIHCRVALYPGV
HHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCC
TAAQAAAEIEAAVASFSRTDPFLANSPPRVVFNGFFAEGYVLEAGSEAEAVLGRAHERAI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHH
GSPLQSFMTAGYLDTRVHALYDRVPALCYGPTSQNIHGFDERVSLASVKRITTTMALFVA
HHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EWCGTERKVS
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Glutathione. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N2-acetyl-L-ornithine; H2O

Specific reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]