| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is coaBC [H]
Identifier: 170747235
GI number: 170747235
Start: 844225
End: 845448
Strand: Reverse
Name: coaBC [H]
Synonym: Mrad2831_0801
Alternate gene names: 170747235
Gene position: 845448-844225 (Counterclockwise)
Preceding gene: 170747236
Following gene: 170747234
Centisome position: 13.91
GC content: 75.33
Gene sequence:
>1224_bases ATGACCGAGACCCTCGCCCAACGCCGCGTCCTCCTCGTCATCGGCGGCGGCATCGCGGCCTACAAGGCCCTCGACCTGAT TCGGCGGCTGCGCGAGCGGGGCGCCAGCGTCTGCCCGGTGCTGACCGCGGGGGCCCAGGAATTCGTGACGCCGCTGGCGG CGGCCGCGCTCGCGGGTGAGCGGGCGCATACCGACCTGTTCGACCGGGCCTCTGAGGCCGAGATCGGCCACATCAAGCTC GCCCGTCAGGCGGATGCCGTGGTGGTGGCGCCCGCGACCGCCAACCTGATGGCCCGGATGGCCGGCGGCCACGCGGCCGA CCTCGCGACCACGATCCTGCTGGCCACGACTCTGCCGATCCTGATCGCGCCGGCCATGAACGTCCAGATGTGGGCGCACC CCGCCACCCGCCGGAACCGCGCGGTCCTGGAGGGGGACGGCGTCCGGATCGTCGGCCCGAACGCCGGCCGGATGGCCGAA CCCGAATCCGGGCCGGGCCGCATGGCCGAGCCCAACGAGATCGCCGACGCGCTGGAACGGATGCTCGGCGCCCCGGCCGG GGACAGGCCCCTGGCCGGCCGCCGGGTGCTCGTGACGTCGGGGCCCACCCACGAGCCGATCGACCCGGTCCGCTACATCG CCAACCGCTCCTCCGGCCGCCAGGGTCACGCCATCGCCGCGGCCGCCGCCGCGGCCGGTGCCGCCGTGACCCTGGTCTCC GGGCCGGTGGCGATCCCCGACCCGCCGGGCGTCGCCGTCGTGCGGGTCGAGACCGCCCGGCAGATGCTGGCCGCCGTCGA GGCGGCGCTGCCGGCCGACATCGCGGTCTTCGCCGCCGCGGTCGCCGACTGGCGCCCGGAGCAGGAGGCCGGCAGCAAGA AGATCAAGAAGGACGGCACCGGGCCGGCGCCGATGCCGCTGGTCGAGAATCCCGACATCCTCGCCACGGTGGCGCGCCGG CCGTCCGGGCGCCCGCCCCTCGTGGTCGGGTTCGCCGCCGAGACCGACGCGGTGGTCGAACACGCCCGGACGAAGATCGC CCGGAAGGGCTGCGACCTGATCGTGGCCAACGACGTGTCGGCGGAGGGCGGCGTCATGGGCGGCGTCGACAACACGGTGC ACCTGATCGGGCGGGACGGCGCGGTAGAGACCTGGCCGCGCCTGGGAAAAGACGAGGTCGCGCGCCGGCTCGTGGCCCAT CTCGCGGCCCTGCTGGCCGGCTGA
Upstream 100 bases:
>100_bases CGCCGCGAGCGCCGGTTCGGCGGGCTGAAGGCACCGGCCGTCCCGGCCGCGGCCTGAGGCCGCTTGACGCGCGCGCGCCG GCGCGCAGAGGGTCGGCGGC
Downstream 100 bases:
>100_bases CGCCGCCCTGCGGGTTCGCCGCCGGTATCCGAGCCGGACTCGCCAAACGGCGTGACTCGTTCCGGGGCCGAAGGCCGTTG CGCACAGGGAAGATAGAAGT
Product: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTETLAQRRVLLVIGGGIAAYKALDLIRRLRERGASVCPVLTAGAQEFVTPLAAAALAGERAHTDLFDRASEAEIGHIKL ARQADAVVVAPATANLMARMAGGHAADLATTILLATTLPILIAPAMNVQMWAHPATRRNRAVLEGDGVRIVGPNAGRMAE PESGPGRMAEPNEIADALERMLGAPAGDRPLAGRRVLVTSGPTHEPIDPVRYIANRSSGRQGHAIAAAAAAAGAAVTLVS GPVAIPDPPGVAVVRVETARQMLAAVEAALPADIAVFAAAVADWRPEQEAGSKKIKKDGTGPAPMPLVENPDILATVARR PSGRPPLVVGFAAETDAVVEHARTKIARKGCDLIVANDVSAEGGVMGGVDNTVHLIGRDGAVETWPRLGKDEVARRLVAH LAALLAG
Sequences:
>Translated_407_residues MTETLAQRRVLLVIGGGIAAYKALDLIRRLRERGASVCPVLTAGAQEFVTPLAAAALAGERAHTDLFDRASEAEIGHIKL ARQADAVVVAPATANLMARMAGGHAADLATTILLATTLPILIAPAMNVQMWAHPATRRNRAVLEGDGVRIVGPNAGRMAE PESGPGRMAEPNEIADALERMLGAPAGDRPLAGRRVLVTSGPTHEPIDPVRYIANRSSGRQGHAIAAAAAAAGAAVTLVS GPVAIPDPPGVAVVRVETARQMLAAVEAALPADIAVFAAAVADWRPEQEAGSKKIKKDGTGPAPMPLVENPDILATVARR PSGRPPLVVGFAAETDAVVEHARTKIARKGCDLIVANDVSAEGGVMGGVDNTVHLIGRDGAVETWPRLGKDEVARRLVAH LAALLAG >Mature_406_residues TETLAQRRVLLVIGGGIAAYKALDLIRRLRERGASVCPVLTAGAQEFVTPLAAAALAGERAHTDLFDRASEAEIGHIKLA RQADAVVVAPATANLMARMAGGHAADLATTILLATTLPILIAPAMNVQMWAHPATRRNRAVLEGDGVRIVGPNAGRMAEP ESGPGRMAEPNEIADALERMLGAPAGDRPLAGRRVLVTSGPTHEPIDPVRYIANRSSGRQGHAIAAAAAAAGAAVTLVSG PVAIPDPPGVAVVRVETARQMLAAVEAALPADIAVFAAAVADWRPEQEAGSKKIKKDGTGPAPMPLVENPDILATVARRP SGRPPLVVGFAAETDAVVEHARTKIARKGCDLIVANDVSAEGGVMGGVDNTVHLIGRDGAVETWPRLGKDEVARRLVAHL AALLAG
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=4e-14, Organism=Escherichia coli, GI87082301, Length=380, Percent_Identity=48.4210526315789, Blast_Score=288, Evalue=5e-79, Organism=Caenorhabditis elegans, GI17560194, Length=172, Percent_Identity=30.8139534883721, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 42017; Mature: 41886
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETLAQRRVLLVIGGGIAAYKALDLIRRLRERGASVCPVLTAGAQEFVTPLAAAALAGE CCCCHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCC RAHTDLFDRASEAEIGHIKLARQADAVVVAPATANLMARMAGGHAADLATTILLATTLPI HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH LIAPAMNVQMWAHPATRRNRAVLEGDGVRIVGPNAGRMAEPESGPGRMAEPNEIADALER HHHCCCCEEEEECCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH MLGAPAGDRPLAGRRVLVTSGPTHEPIDPVRYIANRSSGRQGHAIAAAAAAAGAAVTLVS HHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEE GPVAIPDPPGVAVVRVETARQMLAAVEAALPADIAVFAAAVADWRPEQEAGSKKIKKDGT CCEECCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC GPAPMPLVENPDILATVARRPSGRPPLVVGFAAETDAVVEHARTKIARKGCDLIVANDVS CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCC AEGGVMGGVDNTVHLIGRDGAVETWPRLGKDEVARRLVAHLAALLAG CCCCEECCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TETLAQRRVLLVIGGGIAAYKALDLIRRLRERGASVCPVLTAGAQEFVTPLAAAALAGE CCCHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCC RAHTDLFDRASEAEIGHIKLARQADAVVVAPATANLMARMAGGHAADLATTILLATTLPI HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH LIAPAMNVQMWAHPATRRNRAVLEGDGVRIVGPNAGRMAEPESGPGRMAEPNEIADALER HHHCCCCEEEEECCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH MLGAPAGDRPLAGRRVLVTSGPTHEPIDPVRYIANRSSGRQGHAIAAAAAAAGAAVTLVS HHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEE GPVAIPDPPGVAVVRVETARQMLAAVEAALPADIAVFAAAVADWRPEQEAGSKKIKKDGT CCEECCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCC GPAPMPLVENPDILATVARRPSGRPPLVVGFAAETDAVVEHARTKIARKGCDLIVANDVS CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCC AEGGVMGGVDNTVHLIGRDGAVETWPRLGKDEVARRLVAHLAALLAG CCCCEECCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]