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The map label for this gene is ycbT [H]

Identifier: 170683719

GI number: 170683719

Start: 2184571

End: 2185641

Strand: Reverse

Name: ycbT [H]

Synonym: EcSMS35_2178

Alternate gene names: 170683719

Gene position: 2185641-2184571 (Counterclockwise)

Preceding gene: 170682116

Following gene: 170683162

Centisome position: 43.12

GC content: 47.62

Gene sequence:

>1071_bases
ATGCGAATAATTTCAGGGGATAGTAGTGTGTTAAGACTCCGGCTTCTTTTGACTGCTGTTTTAATGCTGTGGGGATTTCA
TGCCGCCGCTTATACCGGGCAGTGTCATACCACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGG
AGGAGGAAGAGAATACGGCTGGAAAAGTCAAAGATGAATTTTATCAGTGGAGTGAATCGAATGATTATTATGTTTCCTGC
GATTGCGATAAAGACAATGTCAGAAGTGGTCTATGGGCATTCGCTGCGGATTCTCCGTTAGTTTATTTGGGCGACAACTG
GTACAAAATTAACGATTATCTTGCCGCAAAGGTGCTATTAGGAGTGAAAGGTAACACACCTTCGGCCGTACCTTTTGAAA
ATCTCGGTACAGGAAGTGATACCCGATGGCATATTTGCGATCCCGGTGGTCAACGTTTGGGCGGCAAGGGGGCAAGCGGC
AATAGCGGAAGTTTTTCACTGAAAATATTGCAGCCGTTTGTCGGTTCGGTCGTCATTCCTCCTATGGCGCTGGCGCGACT
ATATGAGTGTTACAACATACCCGCAAGTGATTCCTGCACGACTACAGGTACACCGGTTTTAGTGTATTACCTGTCTGGTA
CGATTAATTCACTTGGCTCATGTTCTGTCAATTCTGGAGAGACAATAGAGGTTGATTTGGGGGATGTATTTGCTGCCAAT
TTCCGTGTTGTAGGGCATAAACCGCTTGGATCCAGAACGGCAGAACTCTCAATTCCAGTCAGGTGTAATACCGGAAACGC
AGAGCTGGTTAATGTTAATTTGAGTCTGACGGCAACCAGTGATCCCGATTATCCTCAGGCAATCAAGACATCACGACCAG
GTGTCGGTGTTGTGGTCACCGACAGCCAAAACAACATTATTTCGCCTGCCGGTGGCACACTGCCGCTATCCATCCCTGAC
GACGCGGACAGCTTCGCTCGAATGAATGTTTATCCGGTCAGCACGACAGGTGTACCACCGGAAACCGGGAGCTTTGAAGC
CACAGCAACGGTGAGAATAAACTTTGACTGA

Upstream 100 bases:

>100_bases
TAACTGTACGCTGGGGCGACGCTCCCGATCAAATTTGTCATATCAGTTACGAGCTTACCGAACAACAAATTAACGCTGCG
ATTACGCGGATGGATTCAGT

Downstream 100 bases:

>100_bases
TATGTGAACGTATGAAAAAGAACACAATATTTCAAGTCGTTATCTTATCATTCACTTTGCTTTATATGCATGTCGGGATA
GCTGGACCTGAACAAGTCAG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRIISGDSSVLRLRLLLTAVLMLWGFHAAAYTGQCHTTQGNPYIGVNFGVKTLEEEENTAGKVKDEFYQWSESNDYYVSC
DCDKDNVRSGLWAFAADSPLVYLGDNWYKINDYLAAKVLLGVKGNTPSAVPFENLGTGSDTRWHICDPGGQRLGGKGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPASDSCTTTGTPVLVYYLSGTINSLGSCSVNSGETIEVDLGDVFAAN
FRVVGHKPLGSRTAELSIPVRCNTGNAELVNVNLSLTATSDPDYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSFARMNVYPVSTTGVPPETGSFEATATVRINFD

Sequences:

>Translated_356_residues
MRIISGDSSVLRLRLLLTAVLMLWGFHAAAYTGQCHTTQGNPYIGVNFGVKTLEEEENTAGKVKDEFYQWSESNDYYVSC
DCDKDNVRSGLWAFAADSPLVYLGDNWYKINDYLAAKVLLGVKGNTPSAVPFENLGTGSDTRWHICDPGGQRLGGKGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPASDSCTTTGTPVLVYYLSGTINSLGSCSVNSGETIEVDLGDVFAAN
FRVVGHKPLGSRTAELSIPVRCNTGNAELVNVNLSLTATSDPDYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSFARMNVYPVSTTGVPPETGSFEATATVRINFD
>Mature_356_residues
MRIISGDSSVLRLRLLLTAVLMLWGFHAAAYTGQCHTTQGNPYIGVNFGVKTLEEEENTAGKVKDEFYQWSESNDYYVSC
DCDKDNVRSGLWAFAADSPLVYLGDNWYKINDYLAAKVLLGVKGNTPSAVPFENLGTGSDTRWHICDPGGQRLGGKGASG
NSGSFSLKILQPFVGSVVIPPMALARLYECYNIPASDSCTTTGTPVLVYYLSGTINSLGSCSVNSGETIEVDLGDVFAAN
FRVVGHKPLGSRTAELSIPVRCNTGNAELVNVNLSLTATSDPDYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSFARMNVYPVSTTGVPPETGSFEATATVRINFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787173, Length=356, Percent_Identity=89.8876404494382, Blast_Score=661, Evalue=0.0,
Organism=Escherichia coli, GI145693100, Length=197, Percent_Identity=26.3959390862944, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37949; Mature: 37949

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIISGDSSVLRLRLLLTAVLMLWGFHAAAYTGQCHTTQGNPYIGVNFGVKTLEEEENTA
CEEECCCHHHHHHHHHHHHHHHHHCCHHHEECCEEEECCCCCEEEEECCCEEECCCCCCC
GKVKDEFYQWSESNDYYVSCDCDKDNVRSGLWAFAADSPLVYLGDNWYKINDYLAAKVLL
CCCCHHHEEECCCCCEEEEEECCHHHHCCCEEEEECCCCEEEECCCEEEECCEEEEEEEE
GVKGNTPSAVPFENLGTGSDTRWHICDPGGQRLGGKGASGNSGSFSLKILQPFVGSVVIP
EECCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLYECYNIPASDSCTTTGTPVLVYYLSGTINSLGSCSVNSGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGSRTAELSIPVRCNTGNAELVNVNLSLTATSDPDYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSFARMNVYPVSTTGVPPETGSFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRIISGDSSVLRLRLLLTAVLMLWGFHAAAYTGQCHTTQGNPYIGVNFGVKTLEEEENTA
CEEECCCHHHHHHHHHHHHHHHHHCCHHHEECCEEEECCCCCEEEEECCCEEECCCCCCC
GKVKDEFYQWSESNDYYVSCDCDKDNVRSGLWAFAADSPLVYLGDNWYKINDYLAAKVLL
CCCCHHHEEECCCCCEEEEEECCHHHHCCCEEEEECCCCEEEECCCEEEECCEEEEEEEE
GVKGNTPSAVPFENLGTGSDTRWHICDPGGQRLGGKGASGNSGSFSLKILQPFVGSVVIP
EECCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLYECYNIPASDSCTTTGTPVLVYYLSGTINSLGSCSVNSGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGSRTAELSIPVRCNTGNAELVNVNLSLTATSDPDYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSFARMNVYPVSTTGVPPETGSFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]