Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079364

Identifier: 170079364

GI number: 170079364

Start: 2896206

End: 2897753

Strand: Reverse

Name: 170079364

Synonym: SYNPCC7002_A2773

Alternate gene names: NA

Gene position: 2897753-2896206 (Counterclockwise)

Preceding gene: 170079366

Following gene: 170079363

Centisome position: 96.33

GC content: 48.84

Gene sequence:

>1548_bases
ATGTCCCATTCGATCTCTGCCTTGATTGAAGCGCTACAACAGCCAGCGCTGTATCCCCACCCGACCCAGGAGGCGATCGC
CTTAGTGCAAACCCATGTGTCCTACGTGTTTTTAACTGGGGACTATGCCTACAAACTAAAAAAAGCAGTTAATTTTGGCT
TCCTGGATTTTTCGACTCTAGACAAACGTCAACATTTCTGCGAAGTAGAATTGGAGCTAAATCGTGCCCTGGCTGCTGAC
CTGTACCTAGAAGTGCTGCCCATTACCTATGACGGCCAAACCTACGCCTTTGACGGGGCGGGAGAAGTGGTGGAATATGC
CGTGAAAATGCGTCAATTCCCCCAGGAAAATCTGTTGAGTGAGATGTTTACAGCAGGCACTCTTACCGAAGATCACATGG
TGCAACTGGGAAAAGCTGTCGCTGATTTCCATCAACAGGCAACTACCAACGACTACATTCTGAGCTTTGGGGAAATTGCC
AAAATCCGTCAGGCCATTGATGAAAACTACGCCCAAACGGCCAAATATATTGGCACCGTCCAGACCCAAGACCGCTTCGA
GCAAACCAAACAATTTACAGATAATTTCTTTGCTAGCCGGGAGGAAATTTTTGCCAAACGCCGCCGCGAAGCAAAAATCA
AAGAATGCCATGGCGATCTGCACCTGCGCAATATTTGTTTTTGGCAAGATCAGATTCAACTATTTGACCGCATCGAATTC
AATGAGCCTTTCCGGTTCGTCGATACCATGTATGACGTGGCTTTTACGGTGATGGATTTAGATGCGCGGGGGGCCAGGGA
GCTGGGGAATGCTTTTCTCAATACCTATGTCGAACGTACTGGAGATTGGGAAGGACTCCAGGTTTTACCCCTCTACCTGA
GTCGCCAGGCCTATGTGCGGGCGAAAGTGACTTCATTTCTTTTGGATGATCCGGCGATCGCCCCTGAAGCAAAAATCCAG
GCTGCGGCGATCGCATCAGATTACTACGATCTAGCTTGGCGCTATACCCAACGCCCCCAGGGAAAAGTGATTGTGATGTG
TGGTTTATCCGGTGCTGGCAAATCAACGGTGGCCCGGGCGGCAGCTCGCCAATGGAATGGAATTCAACTGCGCTCCGATG
CTGTGCGTAAACATTTAGCAGGCTTATCTTTAGAAGCAAAAGGCGATGACCGCCTCTACAGTGAAGCGATGAATGAACAA
ACCTATGCTCGCCTACAAGAGCTTGGTTTACTGTTGGCAAAACAGGGTTTTACGGTCATCCTCGATGCCAAATATGACAA
ACTTGTCTATCGTAAAAATGTGATTAAAGTCTGTGCTGACCAGGGTATCCCCTTAGAAATTTTCCACTGTCAGGCACCGT
TGCCAATTTTGGCCCAGCGGTTAACGACCCGCACCAACGATATTTCTGATGCGACAGCAGATCTGCTCACGAGCCAACAG
GAACATTTTGAATCCTTTATCCTAGAGGAACATCCCCTGGTTAAAAACCTGGATACCACCCAGACTCCCGCCGCAATTAT
GGCCCAACTGGCTGAGGAACCTGTTTAA

Upstream 100 bases:

>100_bases
TTAACTTAGACAAAATAGTAGCGATTCAGACTCTGGGCAAAGGTAACCAGAGCAAGATGGCACAATAAACCTCAATATCT
TCTACGGTGAAATTTTTTAG

Downstream 100 bases:

>100_bases
GTCAAAGCAACTGCTGAGAGAAAGGAAAAGGCGATCGCCCACTTGGGTTGAAATATTACGAAAAGTTAACACTTCCGCAT
ATTTCTCTCTCACCCCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSHSISALIEALQQPALYPHPTQEAIALVQTHVSYVFLTGDYAYKLKKAVNFGFLDFSTLDKRQHFCEVELELNRALAAD
LYLEVLPITYDGQTYAFDGAGEVVEYAVKMRQFPQENLLSEMFTAGTLTEDHMVQLGKAVADFHQQATTNDYILSFGEIA
KIRQAIDENYAQTAKYIGTVQTQDRFEQTKQFTDNFFASREEIFAKRRREAKIKECHGDLHLRNICFWQDQIQLFDRIEF
NEPFRFVDTMYDVAFTVMDLDARGARELGNAFLNTYVERTGDWEGLQVLPLYLSRQAYVRAKVTSFLLDDPAIAPEAKIQ
AAAIASDYYDLAWRYTQRPQGKVIVMCGLSGAGKSTVARAAARQWNGIQLRSDAVRKHLAGLSLEAKGDDRLYSEAMNEQ
TYARLQELGLLLAKQGFTVILDAKYDKLVYRKNVIKVCADQGIPLEIFHCQAPLPILAQRLTTRTNDISDATADLLTSQQ
EHFESFILEEHPLVKNLDTTQTPAAIMAQLAEEPV

Sequences:

>Translated_515_residues
MSHSISALIEALQQPALYPHPTQEAIALVQTHVSYVFLTGDYAYKLKKAVNFGFLDFSTLDKRQHFCEVELELNRALAAD
LYLEVLPITYDGQTYAFDGAGEVVEYAVKMRQFPQENLLSEMFTAGTLTEDHMVQLGKAVADFHQQATTNDYILSFGEIA
KIRQAIDENYAQTAKYIGTVQTQDRFEQTKQFTDNFFASREEIFAKRRREAKIKECHGDLHLRNICFWQDQIQLFDRIEF
NEPFRFVDTMYDVAFTVMDLDARGARELGNAFLNTYVERTGDWEGLQVLPLYLSRQAYVRAKVTSFLLDDPAIAPEAKIQ
AAAIASDYYDLAWRYTQRPQGKVIVMCGLSGAGKSTVARAAARQWNGIQLRSDAVRKHLAGLSLEAKGDDRLYSEAMNEQ
TYARLQELGLLLAKQGFTVILDAKYDKLVYRKNVIKVCADQGIPLEIFHCQAPLPILAQRLTTRTNDISDATADLLTSQQ
EHFESFILEEHPLVKNLDTTQTPAAIMAQLAEEPV
>Mature_514_residues
SHSISALIEALQQPALYPHPTQEAIALVQTHVSYVFLTGDYAYKLKKAVNFGFLDFSTLDKRQHFCEVELELNRALAADL
YLEVLPITYDGQTYAFDGAGEVVEYAVKMRQFPQENLLSEMFTAGTLTEDHMVQLGKAVADFHQQATTNDYILSFGEIAK
IRQAIDENYAQTAKYIGTVQTQDRFEQTKQFTDNFFASREEIFAKRRREAKIKECHGDLHLRNICFWQDQIQLFDRIEFN
EPFRFVDTMYDVAFTVMDLDARGARELGNAFLNTYVERTGDWEGLQVLPLYLSRQAYVRAKVTSFLLDDPAIAPEAKIQA
AAIASDYYDLAWRYTQRPQGKVIVMCGLSGAGKSTVARAAARQWNGIQLRSDAVRKHLAGLSLEAKGDDRLYSEAMNEQT
YARLQELGLLLAKQGFTVILDAKYDKLVYRKNVIKVCADQGIPLEIFHCQAPLPILAQRLTTRTNDISDATADLLTSQQE
HFESFILEEHPLVKNLDTTQTPAAIMAQLAEEPV

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 58368; Mature: 58237

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSISALIEALQQPALYPHPTQEAIALVQTHVSYVFLTGDYAYKLKKAVNFGFLDFSTL
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCHHHH
DKRQHFCEVELELNRALAADLYLEVLPITYDGQTYAFDGAGEVVEYAVKMRQFPQENLLS
HHHHHHEEEEEHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHHHHCCHHHHHH
EMFTAGTLTEDHMVQLGKAVADFHQQATTNDYILSFGEIAKIRQAIDENYAQTAKYIGTV
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTQDRFEQTKQFTDNFFASREEIFAKRRREAKIKECHGDLHLRNICFWQDQIQLFDRIEF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEHHHHHHHHHHCCC
NEPFRFVDTMYDVAFTVMDLDARGARELGNAFLNTYVERTGDWEGLQVLPLYLSRQAYVR
CCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHH
AKVTSFLLDDPAIAPEAKIQAAAIASDYYDLAWRYTQRPQGKVIVMCGLSGAGKSTVARA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
AARQWNGIQLRSDAVRKHLAGLSLEAKGDDRLYSEAMNEQTYARLQELGLLLAKQGFTVI
HHHCCCCCEECHHHHHHHHHCCCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEE
LDAKYDKLVYRKNVIKVCADQGIPLEIFHCQAPLPILAQRLTTRTNDISDATADLLTSQQ
EECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
EHFESFILEEHPLVKNLDTTQTPAAIMAQLAEEPV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SHSISALIEALQQPALYPHPTQEAIALVQTHVSYVFLTGDYAYKLKKAVNFGFLDFSTL
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCHHHH
DKRQHFCEVELELNRALAADLYLEVLPITYDGQTYAFDGAGEVVEYAVKMRQFPQENLLS
HHHHHHEEEEEHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHHHHCCHHHHHH
EMFTAGTLTEDHMVQLGKAVADFHQQATTNDYILSFGEIAKIRQAIDENYAQTAKYIGTV
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QTQDRFEQTKQFTDNFFASREEIFAKRRREAKIKECHGDLHLRNICFWQDQIQLFDRIEF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEHHHHHHHHHHCCC
NEPFRFVDTMYDVAFTVMDLDARGARELGNAFLNTYVERTGDWEGLQVLPLYLSRQAYVR
CCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCHHHHHH
AKVTSFLLDDPAIAPEAKIQAAAIASDYYDLAWRYTQRPQGKVIVMCGLSGAGKSTVARA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH
AARQWNGIQLRSDAVRKHLAGLSLEAKGDDRLYSEAMNEQTYARLQELGLLLAKQGFTVI
HHHCCCCCEECHHHHHHHHHCCCEECCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEE
LDAKYDKLVYRKNVIKVCADQGIPLEIFHCQAPLPILAQRLTTRTNDISDATADLLTSQQ
EECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
EHFESFILEEHPLVKNLDTTQTPAAIMAQLAEEPV
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]