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The map label for this gene is xerC [H]

Identifier: 170079366

GI number: 170079366

Start: 2899092

End: 2900057

Strand: Reverse

Name: xerC [H]

Synonym: SYNPCC7002_A2775

Alternate gene names: 170079366

Gene position: 2900057-2899092 (Counterclockwise)

Preceding gene: 170079367

Following gene: 170079364

Centisome position: 96.41

GC content: 49.07

Gene sequence:

>966_bases
ATGGAAACATCTCTGGCTAGCCTTGGCCCTTTTTCCGTCCCTGCGGACAATCCGGACATCCTGAGCCAACTCCTTGAAAA
CCAAAAATCGCCCCACACCTGGCGAGCCTATAAAAAAGATATTCGTGATTTTTTTCGGTTTGTGGCCGATGCCAACGAAC
CCACACCGCTCCTGGTCGAAGCCTTTCTGAATCTGGAGCAACCCCAGGCCCTCGCCCTCGTCCTGCGCTACAAAAATCAT
CTACGGGATGTCCGCTGCCTCAAGGAAGCCACCATTAATCGTCGTCTTGCCGCCCTCAAAGCATTGGTTCGTTTGGCGAA
TCAGTTGGGGCAATGTCGCTATACCCTCGGTGGCATCAAAGGAGAAAAGGTCAGTCGCTATCGGGATACCACTGGGATTT
CACAAACTGTTTATCGACAAATTTTAAAAATTCCTAACCAGAAGACCATTAAGGGCAAACGTGATTACGCTATTTTGAGA
TTGCTTTGGGATAATGCGCTGCGGCGTAATGAAATTGTCCAAACCAACTTAGAAGATTTAGACCTCGAACGGCGATCGCT
CGCAATTTTAGGTAAGGGAAAAGGCCGCCAAAAACAATGGGTGACACTCTCTGCCGCAACGATTGCAGCTCTAAAGGCTT
GGTTAGCTGTCCGCCCTGGATCTAAAAATAAAATTCAGCCACTATTTGTTGCCCTTGATCGCGCTCACCTGGGCCACCGT
CTCACGGGGACAGCTATTTACCAGTTAGTCCGAAACACAGCCAAGGCCGCAGGCGTCACAAAATTATTATCACCCCACCG
CATTCGTCACTCTGGGATTACGGCGGCCCTTGATGCGACTAATGGAGACGTGCGTAAGGTGCAAAAATTTTCTCGTCATG
CCGACCTCAATACCTTGATGATTTATGATGACAACCGCAGGGATCTCCAAGGGGAAATTACAGATCTCTTGGCAAATCTG
ATTTAG

Upstream 100 bases:

>100_bases
CGCTAATCAATGCTTTTAAAACAAGCTATCGAAAACTGTGATTATCGTAAGCTAAACCGCTAAAATGTAGATTAAATCAA
GATTTAAGCGATCGCCGATT

Downstream 100 bases:

>100_bases
CAATCCCCCGAAACATTTAGTCGGCTAAATCGGGAAAGACTTCTCGCACCGAAGGGTGGACTAAACGCCGCTCGGCAATA
TTTAATCCTTGGGCGATCGC

Product: tyrosine recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
METSLASLGPFSVPADNPDILSQLLENQKSPHTWRAYKKDIRDFFRFVADANEPTPLLVEAFLNLEQPQALALVLRYKNH
LRDVRCLKEATINRRLAALKALVRLANQLGQCRYTLGGIKGEKVSRYRDTTGISQTVYRQILKIPNQKTIKGKRDYAILR
LLWDNALRRNEIVQTNLEDLDLERRSLAILGKGKGRQKQWVTLSAATIAALKAWLAVRPGSKNKIQPLFVALDRAHLGHR
LTGTAIYQLVRNTAKAAGVTKLLSPHRIRHSGITAALDATNGDVRKVQKFSRHADLNTLMIYDDNRRDLQGEITDLLANL
I

Sequences:

>Translated_321_residues
METSLASLGPFSVPADNPDILSQLLENQKSPHTWRAYKKDIRDFFRFVADANEPTPLLVEAFLNLEQPQALALVLRYKNH
LRDVRCLKEATINRRLAALKALVRLANQLGQCRYTLGGIKGEKVSRYRDTTGISQTVYRQILKIPNQKTIKGKRDYAILR
LLWDNALRRNEIVQTNLEDLDLERRSLAILGKGKGRQKQWVTLSAATIAALKAWLAVRPGSKNKIQPLFVALDRAHLGHR
LTGTAIYQLVRNTAKAAGVTKLLSPHRIRHSGITAALDATNGDVRKVQKFSRHADLNTLMIYDDNRRDLQGEITDLLANL
I
>Mature_321_residues
METSLASLGPFSVPADNPDILSQLLENQKSPHTWRAYKKDIRDFFRFVADANEPTPLLVEAFLNLEQPQALALVLRYKNH
LRDVRCLKEATINRRLAALKALVRLANQLGQCRYTLGGIKGEKVSRYRDTTGISQTVYRQILKIPNQKTIKGKRDYAILR
LLWDNALRRNEIVQTNLEDLDLERRSLAILGKGKGRQKQWVTLSAATIAALKAWLAVRPGSKNKIQPLFVALDRAHLGHR
LTGTAIYQLVRNTAKAAGVTKLLSPHRIRHSGITAALDATNGDVRKVQKFSRHADLNTLMIYDDNRRDLQGEITDLLANL
I

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=149, Percent_Identity=28.8590604026846, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36222; Mature: 36222

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSLASLGPFSVPADNPDILSQLLENQKSPHTWRAYKKDIRDFFRFVADANEPTPLLVE
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AFLNLEQPQALALVLRYKNHLRDVRCLKEATINRRLAALKALVRLANQLGQCRYTLGGIK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEKVSRYRDTTGISQTVYRQILKIPNQKTIKGKRDYAILRLLWDNALRRNEIVQTNLEDL
CHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
DLERRSLAILGKGKGRQKQWVTLSAATIAALKAWLAVRPGSKNKIQPLFVALDRAHLGHR
CCCHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
LTGTAIYQLVRNTAKAAGVTKLLSPHRIRHSGITAALDATNGDVRKVQKFSRHADLNTLM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
IYDDNRRDLQGEITDLLANLI
EEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
METSLASLGPFSVPADNPDILSQLLENQKSPHTWRAYKKDIRDFFRFVADANEPTPLLVE
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AFLNLEQPQALALVLRYKNHLRDVRCLKEATINRRLAALKALVRLANQLGQCRYTLGGIK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEKVSRYRDTTGISQTVYRQILKIPNQKTIKGKRDYAILRLLWDNALRRNEIVQTNLEDL
CHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
DLERRSLAILGKGKGRQKQWVTLSAATIAALKAWLAVRPGSKNKIQPLFVALDRAHLGHR
CCCHHHEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
LTGTAIYQLVRNTAKAAGVTKLLSPHRIRHSGITAALDATNGDVRKVQKFSRHADLNTLM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEE
IYDDNRRDLQGEITDLLANLI
EEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA