| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is gshA
Identifier: 170079357
GI number: 170079357
Start: 2889501
End: 2890646
Strand: Reverse
Name: gshA
Synonym: SYNPCC7002_A2766
Alternate gene names: NA
Gene position: 2890646-2889501 (Counterclockwise)
Preceding gene: 170079361
Following gene: 170079356
Centisome position: 96.1
GC content: 52.18
Gene sequence:
>1146_bases TTGCTGCTATCAAAAGGTTTAGAGATTGAAATCTACACAGGCACCCCCACCGGAGAAATTATCGGCCTCTCCGATCAAGT GGTAAAGGCCCTCGAAGGCTTTGTGCGGGAACCCGATAATCGCAATGTCGAATACACCACGCCCCCTTGTTGCAGCTATG AAAGTTTGCTCTGTGCAATTTTGCAGCCCCGACTGCAACTGCGTCAGTTTTTGAAAACCCTGGGGAACTACACCCTCATT CCTGGCAGTACCCTCTCTCTCGGTGATGCGAGTCGCTTTTTTCGCTCGGATCCCCAAAATCCCTACCATGCCTATATTGA ACAGACCTATGGCACCGATGTGGTGACGGCCAGTGTCCACATTAATATTGGCATTGAGGATCCAGAAATTTTGATGCGGG CCTGTCGGTTAATGCGCCTCGAAGCCCCGTTAATCCTGGCGCTAAGTGCGGCCTCGCCGTTTCTAGATGGTCGCGTGACG GGTTCCCATTCCCGCCGCTGGCAAGTGTTCCCGAAAACCCCGGCCCAGGTGCCCCTATTTACCAGCCATCAACATTTTAT TGATTGGACTAATGAGCAACTCCGCCTGGGGACGATGCAAAATGTCCGACATTTGTGGTCTTCGGTGCGTCCCAATGGCG ATCGCCGCCCTTATTCCCTGAATCGTTTGGAATTGAGAATTTGTGATTTGGTGATCCATCCCCTGCAATTGCTGGCCATT GTCGCCTTCGTCGAAGCAAGAATTCAACAGCTTTTGGCCCAGCCCCACCTCGACCCCCTCAAATCGAGTCAGTTAAACCC AGCCCACCTCTTGGAAATTACCGATGCCAATGAGCAACTGGCGGCCCAATCTAGCCTAGAGGCGACCCTCTATCACTGGC GCACAGGCCAGCCGATTCAAGCGGTGGATTGGATCCAAGAAATTTATACAGAAGTCTATCCCTTTGCGAAACAGGCGGGA TTTGCTTGTTTTCTCAGCCCCTTGCAAAAGTTACTCCGGGAGGGGAATCAGGCTCAACAATGGCTCCAGGCCCATCGTCA AGGTCAACCTTTAGAGATGATTATCCAAAAGGCGATCGCCGAAGCCGAAACCCTCGATCAAGAATTAGCCCAATATTTGT GCGAACCCGCTGCCCTTGTGGCCTAG
Upstream 100 bases:
>100_bases AGAAATTTTCGCACAAGGAAAGAGAAGGGCAGCATAAAATAGTGTATTGCTGGATAATCTGCATGATTCATCCCCCATTG CCAGGATTTGAGGATACATT
Downstream 100 bases:
>100_bases GTGCTTGAATGGGTATCTTTAACTGTCTGTAAGACTTTTTTTATTAATCTGCGCCGATGCCCCAACTGGTTCTTGTTCAC CCCCAAATTCCCCCCAATAC
Product: glutamate-cysteine ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLLSKGLEIEIYTGTPTGEIIGLSDQVVKALEGFVREPDNRNVEYTTPPCCSYESLLCAILQPRLQLRQFLKTLGNYTLI PGSTLSLGDASRFFRSDPQNPYHAYIEQTYGTDVVTASVHINIGIEDPEILMRACRLMRLEAPLILALSAASPFLDGRVT GSHSRRWQVFPKTPAQVPLFTSHQHFIDWTNEQLRLGTMQNVRHLWSSVRPNGDRRPYSLNRLELRICDLVIHPLQLLAI VAFVEARIQQLLAQPHLDPLKSSQLNPAHLLEITDANEQLAAQSSLEATLYHWRTGQPIQAVDWIQEIYTEVYPFAKQAG FACFLSPLQKLLREGNQAQQWLQAHRQGQPLEMIIQKAIAEAETLDQELAQYLCEPAALVA
Sequences:
>Translated_381_residues MLLSKGLEIEIYTGTPTGEIIGLSDQVVKALEGFVREPDNRNVEYTTPPCCSYESLLCAILQPRLQLRQFLKTLGNYTLI PGSTLSLGDASRFFRSDPQNPYHAYIEQTYGTDVVTASVHINIGIEDPEILMRACRLMRLEAPLILALSAASPFLDGRVT GSHSRRWQVFPKTPAQVPLFTSHQHFIDWTNEQLRLGTMQNVRHLWSSVRPNGDRRPYSLNRLELRICDLVIHPLQLLAI VAFVEARIQQLLAQPHLDPLKSSQLNPAHLLEITDANEQLAAQSSLEATLYHWRTGQPIQAVDWIQEIYTEVYPFAKQAG FACFLSPLQKLLREGNQAQQWLQAHRQGQPLEMIIQKAIAEAETLDQELAQYLCEPAALVA >Mature_381_residues MLLSKGLEIEIYTGTPTGEIIGLSDQVVKALEGFVREPDNRNVEYTTPPCCSYESLLCAILQPRLQLRQFLKTLGNYTLI PGSTLSLGDASRFFRSDPQNPYHAYIEQTYGTDVVTASVHINIGIEDPEILMRACRLMRLEAPLILALSAASPFLDGRVT GSHSRRWQVFPKTPAQVPLFTSHQHFIDWTNEQLRLGTMQNVRHLWSSVRPNGDRRPYSLNRLELRICDLVIHPLQLLAI VAFVEARIQQLLAQPHLDPLKSSQLNPAHLLEITDANEQLAAQSSLEATLYHWRTGQPIQAVDWIQEIYTEVYPFAKQAG FACFLSPLQKLLREGNQAQQWLQAHRQGQPLEMIIQKAIAEAETLDQELAQYLCEPAALVA
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 43010; Mature: 43010
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSKGLEIEIYTGTPTGEIIGLSDQVVKALEGFVREPDNRNVEYTTPPCCSYESLLCAI CCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH LQPRLQLRQFLKTLGNYTLIPGSTLSLGDASRFFRSDPQNPYHAYIEQTYGTDVVTASVH HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEE INIGIEDPEILMRACRLMRLEAPLILALSAASPFLDGRVTGSHSRRWQVFPKTPAQVPLF EEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEE TSHQHFIDWTNEQLRLGTMQNVRHLWSSVRPNGDRRPYSLNRLELRICDLVIHPLQLLAI ECCHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAFVEARIQQLLAQPHLDPLKSSQLNPAHLLEITDANEQLAAQSSLEATLYHWRTGQPIQ HHHHHHHHHHHHHCCCCCCHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHEECCCCCCHH AVDWIQEIYTEVYPFAKQAGFACFLSPLQKLLREGNQAQQWLQAHRQGQPLEMIIQKAIA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH EAETLDQELAQYLCEPAALVA HHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MLLSKGLEIEIYTGTPTGEIIGLSDQVVKALEGFVREPDNRNVEYTTPPCCSYESLLCAI CCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH LQPRLQLRQFLKTLGNYTLIPGSTLSLGDASRFFRSDPQNPYHAYIEQTYGTDVVTASVH HHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEE INIGIEDPEILMRACRLMRLEAPLILALSAASPFLDGRVTGSHSRRWQVFPKTPAQVPLF EEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCEE TSHQHFIDWTNEQLRLGTMQNVRHLWSSVRPNGDRRPYSLNRLELRICDLVIHPLQLLAI ECCHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAFVEARIQQLLAQPHLDPLKSSQLNPAHLLEITDANEQLAAQSSLEATLYHWRTGQPIQ HHHHHHHHHHHHHCCCCCCHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHEECCCCCCHH AVDWIQEIYTEVYPFAKQAGFACFLSPLQKLLREGNQAQQWLQAHRQGQPLEMIIQKAIA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH EAETLDQELAQYLCEPAALVA HHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA