| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ilvB [H]
Identifier: 170079361
GI number: 170079361
Start: 2891967
End: 2893604
Strand: Reverse
Name: ilvB [H]
Synonym: SYNPCC7002_A2770
Alternate gene names: 170079361
Gene position: 2893604-2891967 (Counterclockwise)
Preceding gene: 170079362
Following gene: 170079357
Centisome position: 96.2
GC content: 52.14
Gene sequence:
>1638_bases GTGAATACTGCAGAATTATTGATCCGATGTCTAGAAAATGAAGGGGTGGAGTATATTTTTGGGCTGCCGGGGGAAGAAAA TCTCCATATCCTCGAAGCCCTTAAGGAGTCTCCCATCCGCTTTATCACCGTCCGCCATGAACAGGGTGCCGCTTTTATGG CCGATGTGTATGGTCGTTTAACCGGGAAAGCAGGGGTTTGTCTGTCTACCCTGGGGCCTGGGGCTACCAATCTAATGACT GGGGTTGCCGATGCGAACCTCGATGGGGCGCCCCTGATTGCGATTACAGGGCAGGTGGGTACCGACCGCATGCACATTGA ATCCCACCAATATCTTGATCTGGTGGCGATGTTTGCCCCCGTCACCAAGTGGAATAAACAAATTGTCCGACCGAACACGA CCCCGGAGGTGGTACGTCGTGCCTTTAAAATTGCCCAGCAGGAAAAACCAGGGGCAGTACACATCGATCTCCCTGAAAAT ATTGCGGCGATGCCCGTAGAAGGTCAGCCCCTCCAGCGGGATGGTCGTGAAAAAATCTATGCTTCAAGCCGGAGTTTAAA CCGGGCTGCCGAGGCGATCGCCCATGCCAAGAGTCCTTTAATTCTGGTGGGTAATGGCATTATTCGCGCCGATGCCGCCG AAGCCCTCACCGATTTTGCCACCCAGTTGAATATTCCCGTAGTCAACACCTTTATGGGCAAAGGGGCAATTCCCTACACC CATCCCCTGTCCCTGTGGACGGTAGGACTCCAACAGCGGGATTTTGTCACCTGTGCCTTTGAACAGAGCGATTTGGTGAT TGCAGTGGGCTACGATCTGATCGAATATTCCCCCAAACGCTGGAACCCAGAGGGAACGACCCCAATTATCCACATTGGTG AAGTGGCCGCCGAAATTGATAGTAGTTATATTCCCCTCACAGAAGTTGTCGGCGACATTGGCGATGCCTTAAATGAAATT CGTAAACGCACAGACCGTGAGGGCAAAACCGCGCCAAAATTTCTCAATGTCCGGGCTGAGATTCGGGAGGACTATGAACG CCACGGCACCGACGCTAGTTTTCCGGTCAAACCCCAAAAAATCATCTACGATCTCCGCCAAGTGATGGCCCCAGAGGACA TCGTCATTTCTGATGTGGGGGCCCACAAAATGTGGATGGCCCGCCATTACCATTGCGATCGCCCCAATACTTGCCTGATT TCCAATGGATTTGCGGCGATGGGCATTGCGATTCCCGGTGCTGTAGCAGCCAAATTAGTCTACCCAGAAAAAAATGTCGT GGCTGTCACAGGGGACGGGGGATTTATGATGAACTGCCAGGAGCTCGAAACGGCCCTGCGCATTGGGGCGAACTTTGTCA CCCTAATTTTCAATGATGGTGGCTATGGTTTGATCGGTTGGAAACAGATTAACCAGTTCGGTGCACCAGCCTTTGTGGAG TTTGGCAATCCCGATTTTGTGCAGTTTGCCGAAAGTATGGGCCTCAAGGGTTATCGGATTACCGCCGCCGCCGACCTTGT GCCGACCTTAAAAGAAGCCCTAGCCCAGGATGTACCAGCGGTGATCGATTGCCCCGTGGACTACAGTGAGAATGTGAAAT TCTCCCAAAAATCAGGGGATTTAATCTGCCGTATGTAA
Upstream 100 bases:
>100_bases CTCGCTGGGATTCGCACCTTTGTGAATGCCAAAACGGTGTGGCTGAAATAACCCCCCGACTTTATCCCAACGATTTTGGT GCCTGAGGAGGCGATCGTCC
Downstream 100 bases:
>100_bases CAGGGTGTCGTACTGGGGATGGAGTTCTACCACGCGACCCACAATGGCGATCGCCGGCGCAGAAAAGCCCGTTGTTTCGA CTTTTTGGACAATGTCCCCA
Product: acetolactate synthase
Products: NA
Alternate protein names: ALS [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNTAELLIRCLENEGVEYIFGLPGEENLHILEALKESPIRFITVRHEQGAAFMADVYGRLTGKAGVCLSTLGPGATNLMT GVADANLDGAPLIAITGQVGTDRMHIESHQYLDLVAMFAPVTKWNKQIVRPNTTPEVVRRAFKIAQQEKPGAVHIDLPEN IAAMPVEGQPLQRDGREKIYASSRSLNRAAEAIAHAKSPLILVGNGIIRADAAEALTDFATQLNIPVVNTFMGKGAIPYT HPLSLWTVGLQQRDFVTCAFEQSDLVIAVGYDLIEYSPKRWNPEGTTPIIHIGEVAAEIDSSYIPLTEVVGDIGDALNEI RKRTDREGKTAPKFLNVRAEIREDYERHGTDASFPVKPQKIIYDLRQVMAPEDIVISDVGAHKMWMARHYHCDRPNTCLI SNGFAAMGIAIPGAVAAKLVYPEKNVVAVTGDGGFMMNCQELETALRIGANFVTLIFNDGGYGLIGWKQINQFGAPAFVE FGNPDFVQFAESMGLKGYRITAAADLVPTLKEALAQDVPAVIDCPVDYSENVKFSQKSGDLICRM
Sequences:
>Translated_545_residues MNTAELLIRCLENEGVEYIFGLPGEENLHILEALKESPIRFITVRHEQGAAFMADVYGRLTGKAGVCLSTLGPGATNLMT GVADANLDGAPLIAITGQVGTDRMHIESHQYLDLVAMFAPVTKWNKQIVRPNTTPEVVRRAFKIAQQEKPGAVHIDLPEN IAAMPVEGQPLQRDGREKIYASSRSLNRAAEAIAHAKSPLILVGNGIIRADAAEALTDFATQLNIPVVNTFMGKGAIPYT HPLSLWTVGLQQRDFVTCAFEQSDLVIAVGYDLIEYSPKRWNPEGTTPIIHIGEVAAEIDSSYIPLTEVVGDIGDALNEI RKRTDREGKTAPKFLNVRAEIREDYERHGTDASFPVKPQKIIYDLRQVMAPEDIVISDVGAHKMWMARHYHCDRPNTCLI SNGFAAMGIAIPGAVAAKLVYPEKNVVAVTGDGGFMMNCQELETALRIGANFVTLIFNDGGYGLIGWKQINQFGAPAFVE FGNPDFVQFAESMGLKGYRITAAADLVPTLKEALAQDVPAVIDCPVDYSENVKFSQKSGDLICRM >Mature_545_residues MNTAELLIRCLENEGVEYIFGLPGEENLHILEALKESPIRFITVRHEQGAAFMADVYGRLTGKAGVCLSTLGPGATNLMT GVADANLDGAPLIAITGQVGTDRMHIESHQYLDLVAMFAPVTKWNKQIVRPNTTPEVVRRAFKIAQQEKPGAVHIDLPEN IAAMPVEGQPLQRDGREKIYASSRSLNRAAEAIAHAKSPLILVGNGIIRADAAEALTDFATQLNIPVVNTFMGKGAIPYT HPLSLWTVGLQQRDFVTCAFEQSDLVIAVGYDLIEYSPKRWNPEGTTPIIHIGEVAAEIDSSYIPLTEVVGDIGDALNEI RKRTDREGKTAPKFLNVRAEIREDYERHGTDASFPVKPQKIIYDLRQVMAPEDIVISDVGAHKMWMARHYHCDRPNTCLI SNGFAAMGIAIPGAVAAKLVYPEKNVVAVTGDGGFMMNCQELETALRIGANFVTLIFNDGGYGLIGWKQINQFGAPAFVE FGNPDFVQFAESMGLKGYRITAAADLVPTLKEALAQDVPAVIDCPVDYSENVKFSQKSGDLICRM
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=554, Percent_Identity=25.2707581227437, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI21361361, Length=541, Percent_Identity=24.3992606284658, Blast_Score=136, Evalue=4e-32, Organism=Escherichia coli, GI1790104, Length=537, Percent_Identity=31.4711359404097, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI87081685, Length=565, Percent_Identity=32.212389380531, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1786717, Length=574, Percent_Identity=28.397212543554, Blast_Score=205, Evalue=6e-54, Organism=Escherichia coli, GI1788716, Length=543, Percent_Identity=25.9668508287293, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1787096, Length=551, Percent_Identity=24.1379310344828, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17531299, Length=483, Percent_Identity=27.536231884058, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17531301, Length=483, Percent_Identity=27.536231884058, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17542570, Length=565, Percent_Identity=23.5398230088496, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323755, Length=555, Percent_Identity=30.4504504504505, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6320816, Length=481, Percent_Identity=26.1954261954262, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321524, Length=483, Percent_Identity=23.3954451345756, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323163, Length=484, Percent_Identity=23.5537190082645, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323073, Length=483, Percent_Identity=22.9813664596273, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6320123, Length=491, Percent_Identity=21.7922606924644, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI19922626, Length=559, Percent_Identity=27.1914132379249, Blast_Score=163, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012782 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 59535; Mature: 59535
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAELLIRCLENEGVEYIFGLPGEENLHILEALKESPIRFITVRHEQGAAFMADVYGRL CCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH TGKAGVCLSTLGPGATNLMTGVADANLDGAPLIAITGQVGTDRMHIESHQYLDLVAMFAP CCCCCEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH VTKWNKQIVRPNTTPEVVRRAFKIAQQEKPGAVHIDLPENIAAMPVEGQPLQRDGREKIY HHHHCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCHHHH ASSRSLNRAAEAIAHAKSPLILVGNGIIRADAAEALTDFATQLNIPVVNTFMGKGAIPYT HHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHHHHHHHHHHCCCCEEEHHHCCCCCCCC HPLSLWTVGLQQRDFVTCAFEQSDLVIAVGYDLIEYSPKRWNPEGTTPIIHIGEVAAEID CCCHHEEECCCCCCEEEEEECCCCEEEEECCHHHHCCCCCCCCCCCCCEEEHHHHHHHHC SSYIPLTEVVGDIGDALNEIRKRTDREGKTAPKFLNVRAEIREDYERHGTDASFPVKPQK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH IIYDLRQVMAPEDIVISDVGAHKMWMARHYHCDRPNTCLISNGFAAMGIAIPGAVAAKLV HHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHEEEEE YPEKNVVAVTGDGGFMMNCQELETALRIGANFVTLIFNDGGYGLIGWKQINQFGAPAFVE CCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHHHHCCCCEEEE FGNPDFVQFAESMGLKGYRITAAADLVPTLKEALAQDVPAVIDCPVDYSENVKFSQKSGD CCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCC LICRM EEEEC >Mature Secondary Structure MNTAELLIRCLENEGVEYIFGLPGEENLHILEALKESPIRFITVRHEQGAAFMADVYGRL CCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHH TGKAGVCLSTLGPGATNLMTGVADANLDGAPLIAITGQVGTDRMHIESHQYLDLVAMFAP CCCCCEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH VTKWNKQIVRPNTTPEVVRRAFKIAQQEKPGAVHIDLPENIAAMPVEGQPLQRDGREKIY HHHHCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCHHHH ASSRSLNRAAEAIAHAKSPLILVGNGIIRADAAEALTDFATQLNIPVVNTFMGKGAIPYT HHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHHHHHHHHHHCCCCEEEHHHCCCCCCCC HPLSLWTVGLQQRDFVTCAFEQSDLVIAVGYDLIEYSPKRWNPEGTTPIIHIGEVAAEID CCCHHEEECCCCCCEEEEEECCCCEEEEECCHHHHCCCCCCCCCCCCCEEEHHHHHHHHC SSYIPLTEVVGDIGDALNEIRKRTDREGKTAPKFLNVRAEIREDYERHGTDASFPVKPQK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH IIYDLRQVMAPEDIVISDVGAHKMWMARHYHCDRPNTCLISNGFAAMGIAIPGAVAAKLV HHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCHHEEEEE YPEKNVVAVTGDGGFMMNCQELETALRIGANFVTLIFNDGGYGLIGWKQINQFGAPAFVE CCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCEEEEHHHHHHCCCCEEEE FGNPDFVQFAESMGLKGYRITAAADLVPTLKEALAQDVPAVIDCPVDYSENVKFSQKSGD CCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCC LICRM EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1644303 [H]