Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is ysgA [C]

Identifier: 170079354

GI number: 170079354

Start: 2885395

End: 2886132

Strand: Reverse

Name: ysgA [C]

Synonym: SYNPCC7002_A2763

Alternate gene names: 170079354

Gene position: 2886132-2885395 (Counterclockwise)

Preceding gene: 170079355

Following gene: 170079353

Centisome position: 95.95

GC content: 51.9

Gene sequence:

>738_bases
ATGTCTCCACTCCAAACAGAAACGGTTCAAATTCCCAATGGCGATCTGCAGATTGCGGCTTACTTGAGCTATCCAGTTAG
TGCGGAACCCTTGCCCGCTGTGATTGTGGTGCAGGAAATTTTTGGGGTTAATGGCCACATTCGTGATGTCACTGACCGCA
TTGCCCGCTTGGGTTATGTGGCGATCGCCCCGGCAATTTATCAACGGTTGGCCCCAGGATTTGAAACAGGGTACACTCCA
GAAGACGTGAAAGTCGGACGGCAATACAAAGAACAGACTAAGGCCACAGAACTGCTTAGTGATCTCCAGGCAACCATTGA
TTATCTTTACGGTCGTCCCCAGGTGAAGCCCACGGGAGTCGGTAGCATTGGGTTTTGCTTTGGCGGCCACGTGACCTATC
TGGGAGCGACTCTGCCGGAGATTAAGGCAACAGCGTCTTTTTATGGTGCTGGGATTACCACCTGGTGTCCCGGGGAAGCA
ACCCAGACAACCCTGGACTATACCTCTGAAATCCAAGGCAAACTCTACGGTTTCTTTGGGATGGCCGATGCGTCGATTCC
GGCGGCTCAAGTAGATCAGATCGAGACGGCTTTAAAAACGCACCAAGTTGAGCACAAGATTTTTCGCTATGAAGGGGCAG
GCCATGGCTTCTTTTGCGATCGCCGTGCCAGTTACAATGAACAGGCCGCCCAAGCAGCATGGCAAGAGGTACAGACTCTC
TTTGCTGAAACCCTCTAA

Upstream 100 bases:

>100_bases
GGAGTCTTTCCCTCTTTTTTTGTGGCCATGGGCAAAGCAATCTCGCAGGGAACACCTTCTAAAATGGGAACAATGAAGTT
ATTTATCCAGTGTTTTTGTG

Downstream 100 bases:

>100_bases
ATTTTTTATTTTTGTCTAACTCCGATGACCCAGATGCCGACCGACGACCCCACAATTCAGCTTGATCAATTTCTGAAAAT
TATGAACCTTGTGGCGACGG

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTP
EDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEA
TQTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL
FAETL

Sequences:

>Translated_245_residues
MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTP
EDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEA
TQTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL
FAETL
>Mature_244_residues
SPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYVAIAPAIYQRLAPGFETGYTPE
DVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGVGSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEAT
QTTLDYTSEIQGKLYGFFGMADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTLF
AETL

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=257, Percent_Identity=31.1284046692607, Blast_Score=117, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6320117, Length=194, Percent_Identity=27.8350515463918, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 26741; Mature: 26610

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYV
CCCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAPAIYQRLAPGFETGYTPEDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEATQTTLDYTSEIQGKLYGFFG
CCCHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEE
MADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHH
FAETL
HHHCC
>Mature Secondary Structure 
SPLQTETVQIPNGDLQIAAYLSYPVSAEPLPAVIVVQEIFGVNGHIRDVTDRIARLGYV
CCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AIAPAIYQRLAPGFETGYTPEDVKVGRQYKEQTKATELLSDLQATIDYLYGRPQVKPTGV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSIGFCFGGHVTYLGATLPEIKATASFYGAGITTWCPGEATQTTLDYTSEIQGKLYGFFG
CCCHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEE
MADASIPAAQVDQIETALKTHQVEHKIFRYEGAGHGFFCDRRASYNEQAAQAAWQEVQTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHH
FAETL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]