| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079230
Identifier: 170079230
GI number: 170079230
Start: 2770389
End: 2770733
Strand: Direct
Name: 170079230
Synonym: SYNPCC7002_A2636
Alternate gene names: NA
Gene position: 2770389-2770733 (Clockwise)
Preceding gene: 170079229
Following gene: 170079233
Centisome position: 92.1
GC content: 48.99
Gene sequence:
>345_bases GTGCTGATGGCAGGAGGGGGCGAAAGTCTTTTTTTTCTAGTACTGTCAATAGTGGTCGCAGTTTATTGCTTTTTAGAAAA AATTCCCTACGCCTGCTTAATAGACCGCACCGCAGCACAGCTAAACATTCTTCGTCGCAATAGTTTAGGTCAGCAGCAGT CCCTCATCTACTCCATCAACGACATCGACACTGTAACCGTAATCCGAAATGTGCGCCGAGGGCGGCCTTGTAGCACCAAT GTCTGCTTGAAGTCAGGTGGGCGATCGCGGCTAATGTCCTACCAATCCTGTGCCGCTCAGCACCAAGTTGCAGATCGAAT CACAACTTTCTTGCAAAACCCATAG
Upstream 100 bases:
>100_bases GACCATTACTTCGCGGTAGATATAACCGCTTAAGATTTACTTTATAAATCCCCTCTTAGGAATCGTATTTGTAATTACGG CGTTACTTTCCCTAGGATTA
Downstream 100 bases:
>100_bases CTACATCTGGCTGAATTGATGACACACCCCAGGGATCTAGACAGAGGTGGGCGATTGTTCCTGAAGATTTTTAACATAGT CTCGGAAACGGTGGAGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLMAGGGESLFFLVLSIVVAVYCFLEKIPYACLIDRTAAQLNILRRNSLGQQQSLIYSINDIDTVTVIRNVRRGRPCSTN VCLKSGGRSRLMSYQSCAAQHQVADRITTFLQNP
Sequences:
>Translated_114_residues MLMAGGGESLFFLVLSIVVAVYCFLEKIPYACLIDRTAAQLNILRRNSLGQQQSLIYSINDIDTVTVIRNVRRGRPCSTN VCLKSGGRSRLMSYQSCAAQHQVADRITTFLQNP >Mature_114_residues MLMAGGGESLFFLVLSIVVAVYCFLEKIPYACLIDRTAAQLNILRRNSLGQQQSLIYSINDIDTVTVIRNVRRGRPCSTN VCLKSGGRSRLMSYQSCAAQHQVADRITTFLQNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12671; Mature: 12671
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMAGGGESLFFLVLSIVVAVYCFLEKIPYACLIDRTAAQLNILRRNSLGQQQSLIYSIN CEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECC DIDTVTVIRNVRRGRPCSTNVCLKSGGRSRLMSYQSCAAQHQVADRITTFLQNP CHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLMAGGGESLFFLVLSIVVAVYCFLEKIPYACLIDRTAAQLNILRRNSLGQQQSLIYSIN CEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECC DIDTVTVIRNVRRGRPCSTNVCLKSGGRSRLMSYQSCAAQHQVADRITTFLQNP CHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA