| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079229
Identifier: 170079229
GI number: 170079229
Start: 2769145
End: 2770068
Strand: Direct
Name: 170079229
Synonym: SYNPCC7002_A2635
Alternate gene names: NA
Gene position: 2769145-2770068 (Clockwise)
Preceding gene: 170079227
Following gene: 170079230
Centisome position: 92.06
GC content: 55.09
Gene sequence:
>924_bases ATGGGTGAGAATGCCAGAGTATCCCTACAGACGAAACTGCCCCTCCCCATGAGCCATCCCCACGCTGCCCAACTCCAAAC CCTCATGGCCCAAGCCAATGTGAGCGATGTCATTCAACTGGCGGCCTATTCGCGGGTCGCAGCGCGGCAAATTTACCGAC TGCAAGCTGGGCTCATTCATAGCATCCCCGTCGAAGCCGTGGTGAAATTGGCTCAATATTTCGATCAATCGGTGGATGAA TTTCTCGCTCTATTTCTGCCCACAGGGATTCAGCCGTTAGAATTTACCCCCAAAACAACCCAAGCAACTGGGATTGACCC CGCCGAACTCGAAGCACTCCAGACAGAAGGCGATCGCCTCCGCGCCCAACTAGAAACCCAGGCCATCAACCACGCCGAGG AAATCGAGCAGCTCCAACACCATCTCCAAGTCCAGCAGCAGGAATATACCGACAAAATCGATCACCTCCAACAACAGTTA ACCGACCAAGCCGAAGCCCAGGCCCAGCAGGAAGAAACCCTCAAAGCCGAGTATGCCCGCCTAGAAACCCAACTCGACAG CCAACAAGCGCAAAATGAGCAACGCTGGCAACAGGAAGCCCTGGATATCCTCGAAGCTTGGCTGTTGCAATGGTCTGCCG CTGCCAAGGCCGCCCAAGACAATGCCCAGTTCCCCGCTAGAACTCTGGTGGCCCTCACGCAGCCCTTTGAGCAACTCCTC GCGAGCTGGGATGTGACCCCCATTGGCACCGTCGGCGAAATTGTGGACTATGACCCCCAAGAGCATCAATTAGTAAAAAA TCACGGTGATGTCGGCCCAGGGGATGCGGTGGTAATTCAAAATGCGGGCTACCGCCAAGGCGATCGCCTTTTGCATCGGG CGAAAGTGATCCATCAGGAAGAACCCAAAGGGACAGAAAACTAA
Upstream 100 bases:
>100_bases ATCAAGATTTTTTCATCCCGCAGCGAAAATGCCCCGACAAACACCCCAAAATCGTGATTTTTTAACGATTTAATAAAAAA GGCTGCATCCCTTCTCAGCC
Downstream 100 bases:
>100_bases GGTTTGTCATTGAATCCTAATCTCCAAGCCCTAGTGAGATGACAAATCCACCATGCGCATCCTAATAAGCACTCCCCGCC AACTACATATCGAATTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGENARVSLQTKLPLPMSHPHAAQLQTLMAQANVSDVIQLAAYSRVAARQIYRLQAGLIHSIPVEAVVKLAQYFDQSVDE FLALFLPTGIQPLEFTPKTTQATGIDPAELEALQTEGDRLRAQLETQAINHAEEIEQLQHHLQVQQQEYTDKIDHLQQQL TDQAEAQAQQEETLKAEYARLETQLDSQQAQNEQRWQQEALDILEAWLLQWSAAAKAAQDNAQFPARTLVALTQPFEQLL ASWDVTPIGTVGEIVDYDPQEHQLVKNHGDVGPGDAVVIQNAGYRQGDRLLHRAKVIHQEEPKGTEN
Sequences:
>Translated_307_residues MGENARVSLQTKLPLPMSHPHAAQLQTLMAQANVSDVIQLAAYSRVAARQIYRLQAGLIHSIPVEAVVKLAQYFDQSVDE FLALFLPTGIQPLEFTPKTTQATGIDPAELEALQTEGDRLRAQLETQAINHAEEIEQLQHHLQVQQQEYTDKIDHLQQQL TDQAEAQAQQEETLKAEYARLETQLDSQQAQNEQRWQQEALDILEAWLLQWSAAAKAAQDNAQFPARTLVALTQPFEQLL ASWDVTPIGTVGEIVDYDPQEHQLVKNHGDVGPGDAVVIQNAGYRQGDRLLHRAKVIHQEEPKGTEN >Mature_306_residues GENARVSLQTKLPLPMSHPHAAQLQTLMAQANVSDVIQLAAYSRVAARQIYRLQAGLIHSIPVEAVVKLAQYFDQSVDEF LALFLPTGIQPLEFTPKTTQATGIDPAELEALQTEGDRLRAQLETQAINHAEEIEQLQHHLQVQQQEYTDKIDHLQQQLT DQAEAQAQQEETLKAEYARLETQLDSQQAQNEQRWQQEALDILEAWLLQWSAAAKAAQDNAQFPARTLVALTQPFEQLLA SWDVTPIGTVGEIVDYDPQEHQLVKNHGDVGPGDAVVIQNAGYRQGDRLLHRAKVIHQEEPKGTEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34389; Mature: 34258
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENARVSLQTKLPLPMSHPHAAQLQTLMAQANVSDVIQLAAYSRVAARQIYRLQAGLIH CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPVEAVVKLAQYFDQSVDEFLALFLPTGIQPLEFTPKTTQATGIDPAELEALQTEGDRL HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RAQLETQAINHAEEIEQLQHHLQVQQQEYTDKIDHLQQQLTDQAEAQAQQEETLKAEYAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQLDSQQAQNEQRWQQEALDILEAWLLQWSAAAKAAQDNAQFPARTLVALTQPFEQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASWDVTPIGTVGEIVDYDPQEHQLVKNHGDVGPGDAVVIQNAGYRQGDRLLHRAKVIHQE HHCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC EPKGTEN CCCCCCC >Mature Secondary Structure GENARVSLQTKLPLPMSHPHAAQLQTLMAQANVSDVIQLAAYSRVAARQIYRLQAGLIH CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPVEAVVKLAQYFDQSVDEFLALFLPTGIQPLEFTPKTTQATGIDPAELEALQTEGDRL HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RAQLETQAINHAEEIEQLQHHLQVQQQEYTDKIDHLQQQLTDQAEAQAQQEETLKAEYAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETQLDSQQAQNEQRWQQEALDILEAWLLQWSAAAKAAQDNAQFPARTLVALTQPFEQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASWDVTPIGTVGEIVDYDPQEHQLVKNHGDVGPGDAVVIQNAGYRQGDRLLHRAKVIHQE HHCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC EPKGTEN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA