| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079233
Identifier: 170079233
GI number: 170079233
Start: 2772639
End: 2773292
Strand: Direct
Name: 170079233
Synonym: SYNPCC7002_A2639
Alternate gene names: NA
Gene position: 2772639-2773292 (Clockwise)
Preceding gene: 170079230
Following gene: 170079238
Centisome position: 92.17
GC content: 47.4
Gene sequence:
>654_bases ATGACCATGGAGATTCAAACCAAGTCAATTATTAACAACTTGACCCAGGCGACAGTAACCTGTGAGGGCTTCTGGGAAAA GGCGATCGCCCCTAATCCAGATTTAGCGATTCAACGGGCAATGGAACGATTGTTGGGCCAGCTCAACCAGGCCTTAATCT TAGTGGACTATTTTGAATTGGTGCCTGAAAATCAATTGTCCGTGTTCAAAGAAAGTATTGCTGTTCTTGGGGGCTTAGCC GATCACTACTTTCTCAGTGAAACACCGGGTTTATCTAATTCCCTGGGGTGGGGGCCAAAGGGCATCGAGTTGCGGGGCCA AGTCAAAATTACCCAAACGCAGGTAACGCGAGTGCAACAGTTTGTCGAGACAGCCCGCTACAACATCGCTCTCCATAACT GTGAACATTTTGCGAACTATATCCTCCATGGTTTGCCCCTATCTTCCCAGCAAACGACTTGGCACAAAGGTCTCGGAGCA ACGATTATCGCTCAACTCCAGCCAAAACAAACCATCACCGAAAATATTTTGGCAGATATCAATCGGCAGTTTAAACACCG TCTTCAGGTTGAACGGGCAAAACGAGCCAAACAAGAGATTTATCAGTTTTGCCAAGCCCACCAGATTGAACTCGAACCAG AGGCGATCGCCTAA
Upstream 100 bases:
>100_bases TATTTGTCAGCGTAATGGAAAGGATTACCGAAAAGGGAGCTTTTGTGACGAACTGTAACGCGATCGCCGTCAGGATGATT GAAGACCAAAAATCAAGCGG
Downstream 100 bases:
>100_bases GTTTTTATCAACAAAGAGTCGTTTCTACTTATTCATAAATATTTTGGCGATGACCAACACGAATAATTTCAATGATTAAT GCATTTTTTAAGACAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTMEIQTKSIINNLTQATVTCEGFWEKAIAPNPDLAIQRAMERLLGQLNQALILVDYFELVPENQLSVFKESIAVLGGLA DHYFLSETPGLSNSLGWGPKGIELRGQVKITQTQVTRVQQFVETARYNIALHNCEHFANYILHGLPLSSQQTTWHKGLGA TIIAQLQPKQTITENILADINRQFKHRLQVERAKRAKQEIYQFCQAHQIELEPEAIA
Sequences:
>Translated_217_residues MTMEIQTKSIINNLTQATVTCEGFWEKAIAPNPDLAIQRAMERLLGQLNQALILVDYFELVPENQLSVFKESIAVLGGLA DHYFLSETPGLSNSLGWGPKGIELRGQVKITQTQVTRVQQFVETARYNIALHNCEHFANYILHGLPLSSQQTTWHKGLGA TIIAQLQPKQTITENILADINRQFKHRLQVERAKRAKQEIYQFCQAHQIELEPEAIA >Mature_216_residues TMEIQTKSIINNLTQATVTCEGFWEKAIAPNPDLAIQRAMERLLGQLNQALILVDYFELVPENQLSVFKESIAVLGGLAD HYFLSETPGLSNSLGWGPKGIELRGQVKITQTQVTRVQQFVETARYNIALHNCEHFANYILHGLPLSSQQTTWHKGLGAT IIAQLQPKQTITENILADINRQFKHRLQVERAKRAKQEIYQFCQAHQIELEPEAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24532; Mature: 24401
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMEIQTKSIINNLTQATVTCEGFWEKAIAPNPDLAIQRAMERLLGQLNQALILVDYFEL CCEEEHHHHHHHHHHHHHEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VPENQLSVFKESIAVLGGLADHYFLSETPGLSNSLGWGPKGIELRGQVKITQTQVTRVQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH FVETARYNIALHNCEHFANYILHGLPLSSQQTTWHKGLGATIIAQLQPKQTITENILADI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHEEEECCCHHHHHHHHHHHH NRQFKHRLQVERAKRAKQEIYQFCQAHQIELEPEAIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TMEIQTKSIINNLTQATVTCEGFWEKAIAPNPDLAIQRAMERLLGQLNQALILVDYFEL CEEEHHHHHHHHHHHHHEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VPENQLSVFKESIAVLGGLADHYFLSETPGLSNSLGWGPKGIELRGQVKITQTQVTRVQQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH FVETARYNIALHNCEHFANYILHGLPLSSQQTTWHKGLGATIIAQLQPKQTITENILADI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHEEEECCCHHHHHHHHHHHH NRQFKHRLQVERAKRAKQEIYQFCQAHQIELEPEAIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA