| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079213
Identifier: 170079213
GI number: 170079213
Start: 2748970
End: 2749668
Strand: Reverse
Name: 170079213
Synonym: SYNPCC7002_A2619
Alternate gene names: NA
Gene position: 2749668-2748970 (Counterclockwise)
Preceding gene: 170079214
Following gene: 170079211
Centisome position: 91.41
GC content: 51.36
Gene sequence:
>699_bases ATGATATCTCAACCCAAAAGCTTGCAATGGTGGCAAAAACTGGGGGTGTGGCTCGCAACGGTATTGTTTACCTTTGGGAG TTTTGTTTCGGCAGCCCAGGCCACTGGTGTTTATGATGTGCCCTACGCCACGGGGGATCAACCGATCTGGATTGTGGATC AAGCAGAAGCAATTAGTCGTGCCAACGAAGGACGTTTAAATCGAGAGCTCAGCGAGTTAGCGGACACAACGGGCAAGGGT CTGCATTTTGTCGCGATTCGTCGCCTTGATTATGGTCAAACCATGGAAGAATTTACCGACAAGGTCTTTGCCAAGTGGTT TCCGACACCGGAGGCAGGGGCCGATGAAATCGTGGTGGCGATGGATGTGCTGACGAATAATGTGGCGATCGCCTTGGGAA ATAATATCCAGGAGTTGATTCCACCGGAGACAGCCGAGAGTATTACCGGAGAAACGATCGGTTACCCCCTGCGCAGCAGT TCCTATAACCAAGCCTTCCTGGATGCTGAGGCCCGCATTGGCACCATTTTGAACGGGGAAGCAGATCCTGGCCCCCCAGA CATTGCCGAAATTAACATCGAAAGCACTTTCACCAAGGCCGAAGACACAAAAACAACCAGTTCAACCATTTGGGTTGTGG TGTTGCTTCTCTTGGCGACAATCATTCCCATGGCTACTTACTGGTGGTACGTGCGCTAG
Upstream 100 bases:
>100_bases TAATCGGCACGGCTCAAAGGTCAGTTAGTTTCGGTGGCGATCGCCCTTGGTTTATTCTAGAACCTAAAAGATACGCACAA TTTTTGGACTAGTTTTTAAG
Downstream 100 bases:
>100_bases GGATTAACTTTTGCCAGGATTAAGCCAAATCATTTCCCAGGTGATGTAGGTGCCGACTGGACTCCACAGCAAAAAAGGCA ACAGAAGCCAAAAACTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR
Sequences:
>Translated_232_residues MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR >Mature_232_residues MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISRANEGRLNRELSELADTTGKG LHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVAMDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSS SYNQAFLDAEARIGTILNGEADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25580; Mature: 25580
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECHHHHHH ANEGRLNRELSELADTTGKGLHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVA CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEH MDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSSSYNQAFLDAEARIGTILNGE EEHHHCCEEEEECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCEEECCC ADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR CCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MISQPKSLQWWQKLGVWLATVLFTFGSFVSAAQATGVYDVPYATGDQPIWIVDQAEAISR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECHHHHHH ANEGRLNRELSELADTTGKGLHFVAIRRLDYGQTMEEFTDKVFAKWFPTPEAGADEIVVA CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEH MDVLTNNVAIALGNNIQELIPPETAESITGETIGYPLRSSSYNQAFLDAEARIGTILNGE EEHHHCCEEEEECCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCEEECCC ADPGPPDIAEINIESTFTKAEDTKTTSSTIWVVVLLLLATIIPMATYWWYVR CCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA